2024-11-20 REL PDBj PDBj PDBj 2021-07-23 2021-10-20 2021-10-20 2024-11-20 Structure of Venezuelan equine encephalitis virus with the receptor LDLRAD3 Zhang X Xiang Y Virus, Receptor, Complex, VIRUS LIKE PARTICLE, VIRUS LIKE PARTICLE-PROTEIN BINDING complex Ma B Huang C Ma J Xiang Y Zhang X Structure of Venezuelan equine encephalitis virus with its receptor LDLRAD3. Nature UK 598 677 681 2021 34646021 doi:10.1038/s41586-021-03909-1 1476-4687 0006 NATUAS 7fff FULLOVERLAP Venezuelan equine encephalitis virus (strain TC-83) Venezuelan equine encephalitis virus (strain TC-83) 0 1 2 3 4 5 Venezuelan equine encephalitis virus (strain TC-83) Venezuelan equine encephalitis virus (strain TC-83) 1 1 2 4 5 Homo sapiens LDLRAD3 1 3 Capsid protein Venezuelan equine encephalitis virus (strain TC-83) TC-83 0.030980801 4 Homo sapiens LEVO MFPFQPMYPMQPMPYRNPFAAPRRPWFPRTDPFLAMQVQELTRSMANLTFKQRRDAPPEGPSANKPKKEASQKQKGGGQG KKKKNQGKKKAKTGPPNPKAQNGNKKKTNKKPGKRQRMVMKLESDKTFPIMLEGKINGYACVVGGKLFRPMHVEGKIDND VLAALKTKKASKYDLEYADVPQNMRADTFKYTHEKPQGYYSWHHGAVQYENGRFTVPKGVGAKGDSGRPILDNQGRVVAI VLGGVNEGSRTALSVVMWNEKGVTVKYTPENCEQW P05674 3.4.21.90 Spike glycoprotein E1 Venezuelan equine encephalitis virus (strain TC-83) TC-83 0.047952065999999995 4 Homo sapiens LEVO YEHATTMPSQAGISYNTIVNRAGYAPLPISITPTKIKLIPTVNLEYVTCHYKTGMDSPAIKCCGSQECTPTYRPDEQCKV FTGVYPFMWGGAYCFCDTENTQVSKAYVMKSDDCLADHAEAYKAHTASVQAFLNITVGEHSIVTTVYVNGETPVNFNGVK ITAGPLSTAWTPFDRKIVQYAGEIYNYDFPEYGAGQPGAFGDIQSRTVSSSDLYANTNLVLQRPKAGAIHVPYTQAPSGF EQWKKDKAPSLKFTAPFGCEIYTNPIRAENCAVGSIPLAFDIPDALFTRVSETPTLSAAECTLNECVYSSDFGGIATVKY SASKSGKCAVHVPSGTATLKEAAVELTEQGSATIHFSTANIHPEFRLQICTSYVTCKGDCHPPKDHIVTHPQYHAQTFTA AVSKTAWTWLTSLLGGSAVIIIIGLVLATIVAMYVLTNQKHN P05674 Low-density lipoprotein receptor class A domain-containing protein 3 Homo sapiens 0.007614737 4 Homo sapiens LEVO MWLLGPLCLLLSSAAESQLLPGNNFTNECNIPGNFMCSNGRCIPGAWQCDGLPDCFDKSDEKECPKAKSK Q86YD5 assembly protein E3 Venezuelan equine encephalitis virus (strain TC-83) TC-83 0.006488600999999999 4 Homo sapiens LEVO SLVTTMCLLANVTFPCAQPPICYDRKPAETLAMLSVNVDNPGYDELLEAAVKCPGRKRR P05674 Spike glycoprotein E2 Venezuelan equine encephalitis virus (strain TC-83) TC-83 0.047113746 4 Homo sapiens LEVO STEELFNEYKLTRPYMARCIRCAVGSCHSPIAIEAVKSDGHDGYVRLQTSSQYGLDSSGNLKGRTMRYDMHGTIKEIPLH QVSLYTSRPCHIVDGHGYFLLARCPAGDSITMEFKKDSVRHSCSVPYEVKFNPVGRELYTHPPEHGVEQACQVYAHDAQN RGAYVEMHLPGSEVDSSLVSLSGSSVTVTPPDGTSALVECECGGTKISETINKTKQFSQCTKKEQCRAYRLQNDKWVYNS DKLPKAAGATLKGKLHVPFLLADGKCTVPLAPEPMITFGFRSVSLKLHPKNPTYLITRQLADEPHYTHELISEPAVRNFT VTEKGWEFVWGNHPPKRFWAQETAPGNPHGLPHEVITHYYHRYPMSTILGLSICAAIATVSVAASTWLFCRSRVACLTPY RLTPNARIPFCLAVLCCARTARA P05674 CALCIUM ION 4.0078e-05 4 CA singleParticle particle 8.0 ETHANE FEI TECNAI ARCTICA FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 200 GATAN K2 SUMMIT (4k x 4k) 40.0 1 3.0 FSC 0.143 CUT-OFF 726076 MAXIMUM LIKELIHOOD MAXIMUM LIKELIHOOD emd_31567.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 360 360 360 -180 -180 -180 360 360 360 475.2 475.2 475.2 90.0 90.0 90.0 X Y Z -0.15445258 0.22548763 0.0002711249 0.0060496232 1.32 1.32 1.32 0.02 AUTHOR Structure of Venezuelan equine encephalitis virus with the receptor LDLRAD3