2025-07-02 REL PDBj INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY COORDINATE_REPLACEMENT AUTHOR Sequence discrepancy

The A308 residue of the R chain is corrected to S.

STRUCTURE_SUMMARY atom_site atom_site_anisotrop citation citation_author em_imaging em_software entity entity_name_com entity_poly entity_poly_seq entity_src_gen pdbx_contact_author pdbx_entity_instance_feature pdbx_entity_src_syn pdbx_poly_seq_scheme pdbx_struct_assembly_prop pdbx_struct_sheet_hbond pdbx_unobs_or_zero_occ_residues pdbx_validate_close_contact pdbx_validate_torsion struct_conf struct_conn struct_mon_prot_cis struct_ref struct_ref_seq struct_sheet_range _atom_site_anisotrop.id _atom_site_anisotrop.pdbx_auth_comp_id _atom_site_anisotrop.pdbx_label_asym_id _atom_site_anisotrop.pdbx_label_comp_id _citation.country _citation.journal_abbrev _citation.journal_id_CSD _citation.journal_id_ISSN _citation.journal_volume _citation.page_first _citation.page_last _citation.pdbx_database_id_DOI _citation.pdbx_database_id_PubMed _citation.title _citation.year _citation_author.identifier_ORCID _em_imaging.nominal_defocus_max _em_imaging.nominal_defocus_min _em_software.category _em_software.fitting_id _em_software.imaging_id _entity.formula_weight _entity.pdbx_description _entity.src_method _entity_name_com.entity_id _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.type _entity_poly_seq.entity_id _entity_poly_seq.mon_id _entity_poly_seq.num _entity_src_gen.entity_id _entity_src_gen.gene_src_common_name _pdbx_entity_instance_feature.auth_comp_id _pdbx_entity_instance_feature.comp_id _pdbx_entity_src_syn.entity_id _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.seq_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi _struct_conf.beg_label_asym_id _struct_conf.end_label_asym_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr2_label_asym_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_omega_angle _struct_ref.db_code _struct_ref.db_name _struct_ref.pdbx_db_accession _struct_ref.pdbx_seq_one_letter_code _struct_ref_seq.db_align_beg _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end _struct_ref_seq.pdbx_db_accession _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_end _struct_sheet_range.beg_label_asym_id _struct_sheet_range.end_label_asym_id STRUCTURE_SUMMARY chem_comp_atom chem_comp_bond em_admin pdbx_entry_details pdbx_modification_feature _em_admin.last_update _pdbx_entry_details.has_protein_modification DATA_COLLECTION em_admin em_software _em_admin.last_update _em_software.name EXPERIMENTAL_SUMMARY em_admin em_software _em_admin.last_update _em_software.name PDBj PDBj 2021-07-05 2021-08-18 2021-08-18 2025-07-02 National Natural Science Foundation of China (NSFC) 31770796 China Wang Y Zhuang Y ghrelin, GPCR, Gq, MEMBRANE PROTEIN, GHRP-6 Wang Y Guo S Zhuang Y Yun Y Xu P He X Guo J Yin W Xu HE Xie X Jiang Y Nat Commun UK 12 5064 5064 2021 34417468 doi:10.1038/s41467-021-25364-2 2041-1723 7f9z FULLOVERLAP GHRP-6-bound ghrelin receptor in complex with Gq GHRP-6-bound ghrelin receptor in complex with Gq 0 1 2 3 4 5 6 Homo sapiens Engineered G-alpha-q Homo sapiens 0.041855578 1 Spodoptera frugiperda LEVO MMGCTLSAEDKAAVERSKMIEKQLQKDKQVYRRTLRLLLLGADNSGKSTIVKQMRIYHVNGYSEEECKQYKAVVYSNTIQ SIIAIIRAMGRLKIDFGDSARADDARQLFVLAGAAEEGFMTAELAGVIKRLWKDSGVQACFNRSREYQLNDSAAYYLNDL DRIAQPNYIPTQQDVLRTRVKTSGIFETKFQVDKVNFHMFDVGAQRDERRKWIQCFNDVTAIIFVVDSSDYNRLQEALND FKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPEFARYTTPEDATPEPGEDPRVTRAKYFIRKEFVDISTAS GDGRHICYPHFTCSVDTENARRIFNDCKDIILQMNLREYNLV Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 Homo sapiens 0.040226991999999996 1 Spodoptera frugiperda LEVO MGSLLQSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQ DGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDN QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFF PNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRV SCLGVTDDGMAVATGSWDSFLKIWNGSSGGGGSGGGGSSGVSGWRLFKKIS P62873 3-PYRIDIN-4-YL-2,4-DIHYDRO-INDENO[1,2-.C.]PYRAZOLE synthetic construct 0.000873014 1 DEXTRO (DHI)(DTR)(DAL)(DTR)(DPN)(DLY)(NH2) scFv16 Mus musculus 0.032736526999999994 1 Spodoptera frugiperda LEVO MLLVNQSHQGFNKEHTSKMVSAIVLYVLLAAAAHSAFAVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEK GLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGG GGSGGGGSGGGGSSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDR FSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELLEENLYFQGASHHHHHHHH Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 Homo sapiens 0.007861143 1 Spodoptera frugiperda LEVO MASNNTASIAQARKLVEQLKMEANIDRIKVSKAAADLMAYCEAHAKEDPLLTPVPASENPFREKKFFCAIL P59768 Nb35 Lama glama 0.015343019 1 Escherichia coli LEVO MAQVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNT LYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSHHHHHHEPEA human ghrelin receptor Homo sapiens 0.074282609 1 Spodoptera frugiperda LEVO MKTIIALSYIFCLVFAHHHHHHHHHHADLEDNWETLNDNLKVIEKADNAAQVKDALTKMRAAALDAQKATPPKLEDKSPD SPEMKDFRHGFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTRNAYIQKYLMWNATPSEEPGFNLTLADLDWDASPGND SLGDELLQLFPAPLLAGVTATCVALFVVGIAGNLLTMLVVSRFRELRTTTNLYLSSMAFSDLLIFLCMPLDLVRLWQYRP WNFGDLLCKLFQFVSESCTYATVLTITALSVERYFAICFPLRAKVVVTKGRVKLVIFVIWAVAFCSAGPIFVLVGVEHEN GTDPWDTNECRPTEFAVRSGLLTVMVWVSSIFFFLPVFCLTVLYSLIGRKLWRRRRGDAVVGASLRDQNHKQTVKMLAVV VFAFILCWLPFHVGRYLFSKSFEPGSLEIAQISQYCNLVSFVLFYLSAAINPILYNIMSKKYRVAVFRLLGFEPFSQRKL STLKDESSRAWTESSINTGSAGSVFTLEDFVGDWEQTAAYNLDQVLEQGGVSSLLQNLAVSVTPIQRIVRSGENALKIDI HVIIPYEGLSADQMAQIEEVFKVVYPVDDHHFKVILPYGTLVIDGVTPNMLNYFGRPYEGIAVFDGKKITVTGTLWNGNK IIDERLITPDGSMLFRVTINS singleParticle particle 7.4 ETHANE FEI TITAN KRIOS OTHER OTHER FIELD EMISSION GUN 300 0.5 3.0 GATAN K3 (6k x 4k) 80.0 1 NONE 3.2 FSC 0.143 CUT-OFF 262892 RANDOM ASSIGNMENT MAXIMUM LIKELIHOOD