2025-09-17 REL PDBj INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY STRUCTURE_SUMMARY chem_comp_atom chem_comp_bond em_admin pdbx_entry_details pdbx_modification_feature pdbx_validate_close_contact struct_conn _em_admin.last_update _pdbx_entry_details.has_protein_modification EXPERIMENTAL_SUMMARY em_admin _em_admin.last_update PDBj PDBj 2021-05-28 2021-10-06 2021-10-06 2025-09-17 National Science Foundation (NSF, China) Cryo-EM structure of cyanobacterial phycobilisome from Synechococcus sp. PCC 7002 Zheng L Zheng Z Phycobilisome, Synechococcus sp. PCC 7002, Cryo-EM, photosynthesis Zheng L Zheng Z Li X Wang G Zhang K Wei P Zhao J Gao N Structural insight into the mechanism of energy transfer in cyanobacterial phycobilisomes. Nat Commun UK 12 5497 5497 2021 34535665 doi:10.1038/s41467-021-25813-y 2041-1723 7ext FULLOVERLAP EMDB EMD-31373 associated EM volume
Cryo-EM structure of cyanobacterial phycobilisome from Synechococcus sp. PCC 7002
 Cryo-EM structure of cyanobacterial phycobilisome from Synechococcus sp. PCC 7002 Cryo-EM structure of cyanobacterial phycobilisome from Synechococcus sp. PCC 7002 0 1 2 3 4 5 6 7 8 9 10 Synechococcus sp. PCC 7002 6 Phycobilisome rod-core linker polypeptide CpcG Synechococcus sp. PCC 7002 PCC 7002 0.028540151999999996 6 Synechococcus sp. PCC 7002 LEVO MTIPLLQYAPSSQNTRVAGYTVGGDEQPFVFTTDNVISDSDFDVLINAAYRQIFFHAFKCDRQQLLESQLRNGQITVRDF IRGLLLSETFIDSFYNKNSNYRFVEQCIQRVLGRDPFSEQEKIAWSIVICTKGLAAFVDQLLNTDEYMENFGYDTVPYQR RRSLASREQGEIPFNIKSPRYDAYYRSQLGFPQVVWQNAVRRFRTPDRVPQAGDPALFLNMARSAQIPKVNVRVSAADIS LAAVPYRN Q05238 C-phycocyanin subunit alpha Synechococcus sp. PCC 7002 PCC 7002 0.017637695 72 Synechococcus sp. PCC 7002 LEVO MKTPLTEAVALADSQGRFLSNTELQYLYGRLRQGAFALEAAQTLTAKADTLVNGAAQAVYSKFPYTTSTPGNNFAADQRG KDKCARDIGYYLRMVTYCLVAGGTGPMDEYLIAGVDEINRTFDLSPSWYVEALKHIKANHGLTGDAATETNNYIDYAINA LS P03943 C-phycocyanin subunit beta Synechococcus sp. PCC 7002 PCC 7002 0.018353851999999997 72 Synechococcus sp. PCC 7002 LEVO MFDIFTRVVSQADARGEFISSDKLEALKKVVAEGTKRSDAVSRMTNNASSIVTNAARQLFADQPQLIAPGGNAYTNRRMA ACLRDMEIILRYVTYATFTGDASVLNDRCLNGLRETYVALGVPGASVAAGVRAMGKAAVAIVMDPAGVTSGDCSSLQQEI ELYFETAAKAVE P03944 Phycobilisome 32.3 kDa linker polypeptide, phycocyanin-associated, rod Synechococcus sp. PCC 7002 PCC 7002 0.032308896 12 Synechococcus sp. PCC 7002 LEVO MPVTVAASRLGTAAFDQSPVELRANYSRDDAQTVIRAVYRQVLGNDYVMSSERLTAAESLFTNGFISVRDFVRAVAQSEL YKEKFLYNNFQTRVIELNFKHLLGRAPYDEAEVIEHLDRYQNEGFEADINSYIDSAEYTENFGDNIVPYIRSYVVQTGHR TVGFTRMFSLQRGYANSDRAQIAGNASRLAQELARNTTSAVVGPSGVNEGWAFRSAADDYHPGQSLGGSTGLSADDQVVR VEVAALSTPRYPRIRRSSRVFFVPVSRLSQKLQEIQRMGGRVASISPAGQ Q05237 Phycobiliprotein ApcE Synechococcus sp. PCC 7002 PCC 7002 0.099391656 2 Synechococcus sp. PCC 7002 LEVO MTIKASGGSSLARPQLYQTVPLSNISQAEQQDRYLESGELTALKTFYDSGLKRLAIAQAIKLSSQLIVSRAANRIFAGGS PLAYLDQPETDTDDSDLGVSMAVGDASGATGIFGGVKNLFLGSGGGKIPAGFRPISVSRYGPRNMTKSLRDMAWFLRYTT YAIVAGDPSILVVNTRGLKEVIENACSIPATIVAIQEMKAASLDLFRGDREAQETVVQYFDVLITEMQTQVPNDKLRQRP SIDAQGLQLPQSYFNAAEKRQKFVMKPGLSALEKNSVVKAAYRQIFERDITRAYSQSISYLESQVKSGDISMKEFVRRLA KSPLYRKQFFEPFINSRALELAFRHILGRGPSSREEVQEYFAIVSSGGLAALVDALVDSQEYADYFGEETVPYLRGLGQE AQECRNWGMQQDLFKYSAPFRKVPQFITTFASYNQPLPDQHVYGSGNDALEIQFGAIFPKATRSPSASPAPFNKDTRRIL IHRGPGINNQLGNPRARATQPGSLGAKVFRLNNELPSGKTTNVSFSESATQKVIEAAYRQVFGRMVYAGQRQKVAEIKLE NGEITLREFIRALAKSDVFRNTYWSSLYVTKAVEYIHRRLLGRPTYGRQEINSYFDTCAKKGFYALVDAIIDSKEYEEAF GEDTVPYERYLTPGGYSLRQTRPGALREDVGVKVKVEKTARFIELGTSSTKNLPVTDVDARLKQGVNIQRQQTKAFKLTD TFNKVELKTAIAAAYRQIFERDIEPYIVDAQFTALESKLGNREINMKEFIEGLGCSELYQKEFYTPYPNTKVIEMGTKHF LGRAPLDQQEIRKYNQILASQGLKAFIGAMVNSMEYLDNFGEDTVPFRRFPTLPAANFPNTERLYNQLTKQNRDLVVPSF EPAVKR O68973 4.-.-.- Phycobilisome 7.8 kDa linker polypeptide, allophycocyanin-associated, core Synechococcus sp. PCC 7002 PCC 7002 0.0078061879999999995 6 Synechococcus sp. PCC 7002 LEVO MRMFKITACVPSQSRIRTQRELQNTYFTKLVPYDNWFREQQRIMKMGGKIVKVQLATGKPGTNTGLT O68971 Allophycocyanin alpha subunit Synechococcus sp. PCC 7002 PCC 7002 0.017302659999999997 32 Synechococcus sp. PCC 7002 LEVO MSIVTKSIVNADAEARYLSPGELDRIKAFVTSGESRLRIAETLTGSRERIIKSAGDALFQKRPDVVSPGGNAYGEEMTAT CLRDMDYYLRLITYGVVAGDVTPIEEIGLVGVREMYKSLGTPVDAVAQAVREMKAVATGMMSGDDAAEAGAYFDYVIGAM E B1XQM2 Allophycocyanin beta subunit Synechococcus sp. PCC 7002 PCC 7002 0.01723759 34 Synechococcus sp. PCC 7002 LEVO MQDAITSVINSADVQGKYLDGSAMDKLKAYFTTGALRVRAASTISANAAAIVKEAVAKSLLYSDVTRPGGNMYTTRRYAA CIRDLDYYLRYATYAMLAGDPSILDERVLNGLKETYNSLGVPVGSTVQAIQAMKEVTAGLVGADAGREMGVYFDYICSGL S O68970 Allophycocyanin subunit beta-18 Synechococcus sp. PCC 7002 PCC 7002 0.018742137 2 Synechococcus sp. PCC 7002 LEVO MRDAVTSLIRNYDTTGRYFDRDAIESLKDYFASGNDRITVAAMINSQSAEIVKAAANSLFEAVPELLLAGGNAYTTRRFS ACLRDMDYYLRYGTYALIAGDMDVLNERVLQGLRETYNSLGVPIAPTVRGIQFLKDAIKEMAAAAGIANTAFIDEPFDHM TRELSEVDL O68967 Allophycocyanin subunit alpha-B Synechococcus sp. PCC 7002 PCC 7002 0.01772127 2 Synechococcus sp. PCC 7002 LEVO MSVVSQVILRADDELRYPSSGELSGIKNFLATGAVRIRIAEALADNEKKIVDQAQKQLFSIHPEYRTSGGNAATTKQYNQ CLRDYGWYLRLVTYGILAGDKDPIERIGLIGVKEMYNALGVPVPGMVDAIRCLKDAALGVLDSEEARIAAPYFDFITQAM S O68966 PHYCOCYANOBILIN 0.000588694 288 CYC singleParticle particle 7.0 ETHANE 100 FEI VITROBOT MARK IV FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 FEI TITAN KRIOS AUTOGRID HOLDER NITROGEN GATAN K2 SUMMIT (4k x 4k) 64.0 1 PHASE FLIPPING AND AMPLITUDE CORRECTION 3.5 FSC 0.143 CUT-OFF 64268 NOT APPLICABLE PROJECTION MATCHING emd_31373.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 500 500 500 0 0 0 500 500 500 527.5 527.5 527.5 90.0 90.0 90.0 X Y Z -0.028300187 0.082177125 -0.00019888715 0.0045821336 1.055 1.055 1.055 0.0167 AUTHOR