2025-09-17 REL PDBj INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY STRUCTURE_SUMMARY chem_comp_atom chem_comp_bond database_2 em_admin pdbx_entry_details _database_2.pdbx_DOI _database_2.pdbx_database_accession _em_admin.last_update _pdbx_entry_details.has_protein_modification EXPERIMENTAL_SUMMARY database_2 em_admin _database_2.pdbx_DOI _database_2.pdbx_database_accession _em_admin.last_update DERIVED_CALCULATIONS em_admin pdbx_validate_close_contact struct_conn struct_conn_type _em_admin.last_update EXPERIMENTAL_SUMMARY em_admin _em_admin.last_update PDBj PDBj 2021-03-06 2021-07-14 2021-07-14 2025-09-17 National Natural Science Foundation of China (NSFC) 32022036 China National Natural Science Foundation of China (NSFC) 31570766 China National Natural Science Foundation of China (NSFC) U1632130 China Jing H Liu Y methyltransferase, Set2, nucleosome, H3K36M mutation, GENE REGULATION Liu Y Zhang Y Xue H Cao M Bai G Mu Z Yao Y Sun S Fang D Huang J Cell Discov UK 7 32 32 2021 33972509 doi:10.1038/s41421-021-00261-6 2056-5968 7ea5 FULLOVERLAP EMDB EMD-31039 associated EM volume

Yeast Set2 bound to a nucleosome containing oncohistone mutations

The Set2-nucleosome(H3K36M)complex structure The Set2-nucleosome(H3K36M)complex structure 0 1 2 3 4 5 6 7 Xenopus laevis Histone H3 Xenopus laevis 0.011847915999999998 2 Escherichia coli BL21(DE3) LEVO GVMKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIH AKRVTIMPKDIQLARRIRGER A0A310TTQ1 Histone H4 Xenopus laevis 0.008853342 2 Escherichia coli LEVO DNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFG Histone H2A Xenopus laevis 0.011494393 2 Escherichia coli LEVO KAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEE LNKLLGRVTIAQGGVLPNIQSVLLP Q6AZJ8 Histone H2B Xenopus laevis 0.010406954 2 Escherichia coli BL21 LEVO KTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHA VSEGTKAVTKYTS A0A1L8FQA5 601-DNA synthetic construct 0.044521367 1 (DT)(DC)(DG)(DA)(DG)(DA)(DA)(DT)(DC)(DC)(DC)(DG)(DG)(DT)(DG)(DC)(DC)(DG)(DA)(DG) (DG)(DC)(DC)(DG)(DC)(DT)(DC)(DA)(DA)(DT)(DT)(DG)(DG)(DT)(DC)(DG)(DT)(DA)(DG)(DA) (DC)(DA)(DG)(DC)(DT)(DC)(DT)(DA)(DG)(DC)(DA)(DC)(DC)(DG)(DC)(DT)(DT)(DA)(DA)(DA) (DC)(DG)(DC)(DA)(DC)(DG)(DT)(DA)(DC)(DG)(DC)(DG)(DC)(DT)(DG)(DT)(DC)(DC)(DC)(DC) (DC)(DG)(DC)(DG)(DT)(DT)(DT)(DT)(DA)(DA)(DC)(DC)(DG)(DC)(DC)(DA)(DA)(DG)(DG)(DG) (DG)(DA)(DT)(DT)(DA)(DC)(DT)(DC)(DC)(DC)(DT)(DA)(DG)(DT)(DC)(DT)(DC)(DC)(DA)(DG) (DG)(DC)(DA)(DC)(DG)(DT)(DG)(DT)(DC)(DA)(DG)(DA)(DT)(DA)(DT)(DA)(DT)(DA)(DC)(DA) (DT)(DC)(DC)(DG)(DA) DNA 601-DNA synthetic construct 0.044992647999999996 1 (DT)(DC)(DG)(DG)(DA)(DT)(DG)(DT)(DA)(DT)(DA)(DT)(DA)(DT)(DC)(DT)(DG)(DA)(DC)(DA) (DC)(DG)(DT)(DG)(DC)(DC)(DT)(DG)(DG)(DA)(DG)(DA)(DC)(DT)(DA)(DG)(DG)(DG)(DA)(DG) (DT)(DA)(DA)(DT)(DC)(DC)(DC)(DC)(DT)(DT)(DG)(DG)(DC)(DG)(DG)(DT)(DT)(DA)(DA)(DA) (DA)(DC)(DG)(DC)(DG)(DG)(DG)(DG)(DG)(DA)(DC)(DA)(DG)(DC)(DG)(DC)(DG)(DT)(DA)(DC) (DG)(DT)(DG)(DC)(DG)(DT)(DT)(DT)(DA)(DA)(DG)(DC)(DG)(DG)(DT)(DG)(DC)(DT)(DA)(DG) (DA)(DG)(DC)(DT)(DG)(DT)(DC)(DT)(DA)(DC)(DG)(DA)(DC)(DC)(DA)(DA)(DT)(DT)(DG)(DA) (DG)(DC)(DG)(DG)(DC)(DC)(DT)(DC)(DG)(DG)(DC)(DA)(DC)(DC)(DG)(DG)(DG)(DA)(DT)(DT) (DC)(DT)(DC)(DG)(DA) DNA Histone-lysine N-methyltransferase, H3 lysine-36 specific Saccharomyces cerevisiae 0.026699021 1 Escherichia coli BL21(DE3) LEVO EPDLTEEALTKFENLDDCIYANKRIGTFKNNDFMECDCYEEFSDGVNHACDEDSDCINRLTLIECVNDLCSSCGNDCQNQ RFQKKQYAPIAIFKTKHKGYGVRAEQDIEANQFIYEYKGEVIEEMEFRDRLIDYDQRHFKHFYFMMLQNGEFIDATIKGS LARFCNHSCSPNAYVNKWVVKDKLRMGIFAQRKILKGEEITFDYNVDRYGAQAQKCYCEEPNCIGFLG A0A6V8RR65 2.1.1.359 ZINC ION 6.5409e-05 3 ZN S-ADENOSYLMETHIONINE 0.000398437 1 SAM singleParticle particle 0.3 7.5 ETHANE FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 GATAN K3 (6k x 4k) 1.5625 1 PHASE FLIPPING AND AMPLITUDE CORRECTION 3.3 FSC 0.143 CUT-OFF 225474 ANGULAR RECONSTITUTION ANGULAR RECONSTITUTION