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                        <description>Metalloprotein remediation</description>
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                            <category>chem_comp</category>
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        <sites>
            <deposition>PDBj</deposition>
            <last_processing>PDBj</last_processing>
        </sites>
        <key_dates>
            <deposition>2021-01-17</deposition>
            <header_release>2021-06-02</header_release>
            <map_release>2021-06-02</map_release>
            <update>2026-08-12</update>
        </key_dates>
        <title>Photosystem I from a chlorophyll d-containing cyanobacterium Acaryochloris marina</title>
        <authors_list>
            <author>Chen JH</author>
            <author>Zhang X</author>
        </authors_list>
        <keywords>Photosystem I, reaction center, cryo-EM, cyanobacteria, PHOTOSYNTHESIS</keywords>
    </admin>
    <crossreferences>
        <citation_list>
            <primary_citation>
                <journal_citation published="true">
                    <author ORCID="0000-0002-1424-1775" order="1">Xu C</author>
                    <author ORCID="0000-0001-8963-9772" order="2">Zhu Q</author>
                    <author ORCID="0000-0003-4072-628X" order="3">Chen JH</author>
                    <author ORCID="0000-0003-0868-3283" order="4">Shen L</author>
                    <author ORCID="0000-0003-2297-110X" order="5">Yi X</author>
                    <author ORCID="0000-0002-3367-9924" order="6">Huang Z</author>
                    <author ORCID="0000-0002-1842-8633" order="7">Wang W</author>
                    <author ORCID="0000-0001-8070-3248" order="8">Chen M</author>
                    <author ORCID="0000-0002-1885-4210" order="9">Kuang T</author>
                    <author ORCID="0000-0003-4471-8797" order="10">Shen JR</author>
                    <author ORCID="0000-0002-6776-326X" order="11">Zhang X</author>
                    <author ORCID="0000-0003-3373-2008" order="12">Han G</author>
                    <title>A unique photosystem I reaction center from a chlorophyll d-containing cyanobacterium Acaryochloris marina.</title>
                    <journal_abbreviation>J Integr Plant Biol</journal_abbreviation>
                    <country>CN</country>
                    <volume>63</volume>
                    <first_page>1740</first_page>
                    <last_page>1752</last_page>
                    <year>2021</year>
                    <external_references type="PUBMED">34002536</external_references>
                    <external_references type="DOI">doi:10.1111/jipb.13113</external_references>
                    <external_references type="ISSN">1744-7909</external_references>
                </journal_citation>
            </primary_citation>
        </citation_list>
        <pdb_list>
            <pdb_reference>
                <pdb_id>7dwq</pdb_id>
                <relationship>
                    <in_frame>FULLOVERLAP</in_frame>
                </relationship>
            </pdb_reference>
        </pdb_list>
        <other_db_list>
            <db_reference>
                <db_name>EMDB</db_name>
                <accession_id>EMD-30882</accession_id>
                <content_type>associated EM volume</content_type>
                <details>Photosystem I from a chlorophyll d-containing cyanobacterium Acaryochloris marina</details>
            </db_reference>
        </other_db_list>
    </crossreferences>
    <sample>
        <name>Photosystem I from a chlorophyll d-containing cyanobacterium Acaryochloris marina</name>
        <supramolecule_list>
            <complex_supramolecule supramolecule_id="1">
                <name>Photosystem I from a chlorophyll d-containing cyanobacterium Acaryochloris marina</name>
                <parent>0</parent>
                <macromolecule_list>
                    <macromolecule>
                        <macromolecule_id>1</macromolecule_id>
                    </macromolecule>
                    <macromolecule>
                        <macromolecule_id>2</macromolecule_id>
                    </macromolecule>
                    <macromolecule>
                        <macromolecule_id>3</macromolecule_id>
                    </macromolecule>
                    <macromolecule>
                        <macromolecule_id>4</macromolecule_id>
                    </macromolecule>
                    <macromolecule>
                        <macromolecule_id>5</macromolecule_id>
                    </macromolecule>
                    <macromolecule>
                        <macromolecule_id>6</macromolecule_id>
                    </macromolecule>
                    <macromolecule>
                        <macromolecule_id>7</macromolecule_id>
                    </macromolecule>
                    <macromolecule>
                        <macromolecule_id>8</macromolecule_id>
                    </macromolecule>
                    <macromolecule>
                        <macromolecule_id>9</macromolecule_id>
                    </macromolecule>
                    <macromolecule>
                        <macromolecule_id>10</macromolecule_id>
                    </macromolecule>
                </macromolecule_list>
                <natural_source database="NCBI">
                    <organism ncbi="329726">Acaryochloris marina MBIC11017</organism>
                </natural_source>
            </complex_supramolecule>
        </supramolecule_list>
        <macromolecule_list>
            <protein_or_peptide macromolecule_id="1">
                <name>Photosystem I protein PsaD</name>
                <natural_source database="NCBI">
                    <organism ncbi="329726">Acaryochloris marina MBIC11017</organism>
                    <strain>MBIC 11017</strain>
                </natural_source>
                <molecular_weight>
                    <theoretical units="MDa">0.015114146</theoretical>
                </molecular_weight>
                <number_of_copies>1</number_of_copies>
                <enantiomer>LEVO</enantiomer>
                <sequence>
                    <string>MAETLTGQTPLFGGSTGGLLSSAETEEKYAITWTSPKQQVFEMPTGGAAVMNEGENLLYLARKEQCLALGLRQLRTKKIM
DYKIYRVLPDGSNTLLHPKDGVFPEKSNEGRAAVNSVARSIGENPNPGAIKYTGKKAYD</string>
                    <external_references type="UNIPROTKB">B0C8F1</external_references>
                </sequence>
            </protein_or_peptide>
            <protein_or_peptide macromolecule_id="2">
                <name>Photosystem I P740 chlorophyll a apoprotein A1</name>
                <natural_source database="NCBI">
                    <organism ncbi="329726">Acaryochloris marina MBIC11017</organism>
                    <strain>MBIC 11017</strain>
                </natural_source>
                <molecular_weight>
                    <theoretical units="MDa">0.083470539</theoretical>
                </molecular_weight>
                <number_of_copies>1</number_of_copies>
                <enantiomer>LEVO</enantiomer>
                <sequence>
                    <string>MTTSPGGPETKGRTAEVDINPVSASLEVAGKPGHFNKSLSKGPQTTTWIWNLHALAHDFDTQTNDLEEISRKIFSAHFGH
LSIIFVWISGMIFHAARFSNYYAWLADPLGNKPSAHVVWPIVGQDILNADVGNGFRGVQITSGLFHILRGAGMTDPGELY
SAAIGALVAAVVMMYAGYYHYHKKAPKLEWFQNAESTMTHHLIVLLGLGNLAWTGHLIHVSLPVNKLLDSGVAPQDIPIP
HEFLFDNGFMADLYPSFAQGLMPYFTLNWGAYSDFLTFKGGLDPTTGGLWMTDIAHHHLALAVMYIIAGHMYRTNWGIGH
SMKEIMESHKGPFTGEGHKGLYEVLTTSWHAQLAINLATWGSFSIIVAHHMYAMPPYPYLATDYGTQLNLFVHHMWIGGF
LIVGGAAHAAIFMVRDYDPAVNQNNVLDRMLRHRDTIISHLNWVCIFLGFHSFGLYIHNDNMRSLGRPQDMFSDTAIQLQ
PIFSQWVQNLQANVAGTIRAPLAEGASSLAWGGDPLFVGGKVAMQHVSLGTADFMIHHIHAFQIHVTVLILIKGVLYARS
SRLIPDKANLGFRFPCDGPGRGGTCQSSGWDHIFLGLFWMYNCISIVNFHFFWKMQSDVWGAANANGGVNYLTAGNWAQS
SITINGWLRDFLWAQSVQVINSYGSALSAYGILFLGAHFIWAFSLMFLFSGRGYWQELIESIVWAHSKLKIAPAIQPRAM
SITQGRAVGLGHYLLGGIVTSWSFYLARILALG</string>
                    <external_references type="UNIPROTKB">B0C474</external_references>
                </sequence>
                <ec_number>1.97.1.12</ec_number>
            </protein_or_peptide>
            <protein_or_peptide macromolecule_id="3">
                <name>Photosystem I P740 chlorophyll a apoprotein A2</name>
                <natural_source database="NCBI">
                    <organism ncbi="329726">Acaryochloris marina MBIC11017</organism>
                    <strain>MBIC 11017</strain>
                </natural_source>
                <molecular_weight>
                    <theoretical units="MDa">0.08221055499999999</theoretical>
                </molecular_weight>
                <number_of_copies>1</number_of_copies>
                <enantiomer>LEVO</enantiomer>
                <sequence>
                    <string>MATKFPSFSQDLAQDPTTRRIWYGIATVHDFETHDGMTEENLYQKIFATHFGHLSIIFLWSAGHLFHVAWQGNFEQWIQD
PLTIRPIAHAIWDPHLGDAATQAFTQAGASGPVDLCYSGLYQWWYTIGMRTNGDLYIGSVFLMIVAAVMLFAGWLHLQPK
FRPSLAWFRDAESQMNHHLAVLFGASSLGWTGHLIHVAIPEARGQHVGWDNFLSTMPHPAGLAPFFTGRWGVYAQNPDTA
GHIFGTSEGAGTAIITFIGGFHPQTEALWLTDIAHHHLAIAVMYIIAGHMYRTQFGIGHSMKEILEAHTPPSGMLGDAHK
GLYDTYNESLHFQLGFHLAALGVITSVVAQHMYSLPSYAFISQDHVTQAALYTHHQYIAGILAIGAFAHGGIFFVRDYDP
ERNKNNVLARALEHKEAIISHLSWVSMFSGFHTLGVYVHNDTVVAFGTPEKQILVEPIFAQWIQAAHGKLLLGFETLLSN
PNGLAYNPPNISPDVFVPGWVEAMNNPVIGPFMSQGPGDFLVHHGIAFSLHVTVLICVKGCLDARGSKLMPDKKDFGYSF
PCDGPGRGGTCDISAWDSFYLAFFWMLNTIGWIVFYFNWKHLAIWSGNEAQFNTNSTYLMGWLRDYLWGYSAQLINGYTP
FGVNSLSVWAWIFLLGHLCWATGFLFLISWRGYWQELIETLVWAHQRTPLANLVTWKDKPVALSIVQGRLVGLVHFAVGY
YVTYAAFVIGATAPLG</string>
                    <external_references type="UNIPROTKB">B0C475</external_references>
                </sequence>
                <ec_number>1.97.1.12</ec_number>
            </protein_or_peptide>
            <protein_or_peptide macromolecule_id="4">
                <name>Photosystem I iron-sulfur center</name>
                <natural_source database="NCBI">
                    <organism ncbi="329726">Acaryochloris marinan MBIC11017</organism>
                    <strain>MBIC 11017</strain>
                </natural_source>
                <molecular_weight>
                    <theoretical units="MDa">0.008825207</theoretical>
                </molecular_weight>
                <number_of_copies>1</number_of_copies>
                <enantiomer>LEVO</enantiomer>
                <sequence>
                    <string>MSHTVKIYDTCIGCTQCVRACPTDVLEMVPWDGCKAGQIASSPRTEDCVGCKRCETACPTDFLSIRVYLGAETTRSMGLA
Y</string>
                    <external_references type="UNIPROTKB">B0CB42</external_references>
                </sequence>
                <ec_number>1.97.1.12</ec_number>
            </protein_or_peptide>
            <protein_or_peptide macromolecule_id="5">
                <name>Photosystem I reaction center subunit IV</name>
                <natural_source database="NCBI">
                    <organism ncbi="329726">Acaryochloris marina MBIC11017</organism>
                    <strain>MBIC 11017</strain>
                </natural_source>
                <molecular_weight>
                    <theoretical units="MDa">0.009560822</theoretical>
                </molecular_weight>
                <number_of_copies>1</number_of_copies>
                <enantiomer>LEVO</enantiomer>
                <sequence>
                    <string>MVQRGSKVRILRPESYWFREIGTVASVDQSGIKYPVIVRFDTCNYNGISGTAAGINTNNFGVHELEEVEAPKGGKKPAAK
PAAAPKAEG</string>
                    <external_references type="UNIPROTKB">B0C5D5</external_references>
                </sequence>
            </protein_or_peptide>
            <protein_or_peptide macromolecule_id="6">
                <name>Photosystem I protein PsaF</name>
                <natural_source database="NCBI">
                    <organism ncbi="329726">Acaryochloris marina MBIC11017</organism>
                    <strain>MBIC 11017</strain>
                </natural_source>
                <molecular_weight>
                    <theoretical units="MDa">0.017844620999999998</theoretical>
                </molecular_weight>
                <number_of_copies>1</number_of_copies>
                <enantiomer>LEVO</enantiomer>
                <sequence>
                    <string>MRRLFAVLLVMTLFLGVVPPASADIGGLVPCSESPKFQERAAKARNTTADPNSGQKRFEMYSSALCGPEDGLPRIIAGGP
MRRAGDFLIPGLFFIYIAGGIGNSSRNYQIANRKKNAKNPAMGEIIIDVPLAVSSTIAGMAWPLTAFRELTSGELTVPDS
DVTVSPR</string>
                    <external_references type="UNIPROTKB">B0C7S7</external_references>
                </sequence>
            </protein_or_peptide>
            <protein_or_peptide macromolecule_id="7">
                <name>Photosystem I reaction center subunit IX</name>
                <natural_source database="NCBI">
                    <organism ncbi="329726">Acaryochloris marina MBIC 11017</organism>
                    <strain>MBIC 11017</strain>
                </natural_source>
                <molecular_weight>
                    <theoretical units="MDa">0.005900939</theoretical>
                </molecular_weight>
                <number_of_copies>1</number_of_copies>
                <enantiomer>LEVO</enantiomer>
                <sequence>
                    <string>MGDVPLKIDSEKDFMKFFSTAPVIALVFFTLTAGFLVELNRFFPDILFFPY</string>
                    <external_references type="UNIPROTKB">B0C7S6</external_references>
                </sequence>
            </protein_or_peptide>
            <protein_or_peptide macromolecule_id="8">
                <name>Photosystem I protein PsaL</name>
                <natural_source database="NCBI">
                    <organism ncbi="329726">Acaryochloris marina MBIC 11017</organism>
                    <strain>MBIC 11017</strain>
                </natural_source>
                <molecular_weight>
                    <theoretical units="MDa">0.015349587999999999</theoretical>
                </molecular_weight>
                <number_of_copies>1</number_of_copies>
                <enantiomer>LEVO</enantiomer>
                <sequence>
                    <string>MTMDLVKHGGDPLVGDLATPVNSSGIVKAWINNLPAYRKGMSANARGLEIGMAHGYYLYGPFATSGPIRGTTMSLVSGVL
SASAVVIVLSVAIQIYSSVSSAKPLPSVTTADPGSDFGTKEGWSAVGSGFLIGGCGGAVIAGVLSYAIAAFVG</string>
                    <external_references type="UNIPROTKB">B0C7S4</external_references>
                </sequence>
            </protein_or_peptide>
            <protein_or_peptide macromolecule_id="9">
                <name>Photosystem I reaction center subunit XII</name>
                <natural_source database="NCBI">
                    <organism ncbi="329726">Acaryochloris marina MBIC11017</organism>
                    <strain>MBIC 11017</strain>
                </natural_source>
                <molecular_weight>
                    <theoretical units="MDa">0.0031908989999999996</theoretical>
                </molecular_weight>
                <number_of_copies>1</number_of_copies>
                <enantiomer>LEVO</enantiomer>
                <sequence>
                    <string>MELSDLQIVIALVVALLPALLALNLGSALSK</string>
                </sequence>
            </protein_or_peptide>
            <protein_or_peptide macromolecule_id="10">
                <name>Photosystem I protein Psa27</name>
                <natural_source database="NCBI">
                    <organism ncbi="329726">Acaryochloris marina MBIC11017</organism>
                    <strain>MBIC 11017</strain>
                </natural_source>
                <molecular_weight>
                    <theoretical units="MDa">0.0036483369999999998</theoretical>
                </molecular_weight>
                <number_of_copies>1</number_of_copies>
                <enantiomer>LEVO</enantiomer>
                <sequence>
                    <string>MISDILPAIMTPLVVLIGGGAAMTAFFYYVEREG</string>
                </sequence>
            </protein_or_peptide>
            <ligand macromolecule_id="11">
                <name>CHLOROPHYLL D</name>
                <molecular_weight>
                    <theoretical units="MDa">0.000895462</theoretical>
                </molecular_weight>
                <number_of_copies>76</number_of_copies>
                <formula>CL7</formula>
            </ligand>
            <ligand macromolecule_id="12">
                <name>PHYLLOQUINONE</name>
                <molecular_weight>
                    <theoretical units="MDa">0.000450696</theoretical>
                </molecular_weight>
                <number_of_copies>2</number_of_copies>
                <formula>PQN</formula>
            </ligand>
            <ligand macromolecule_id="13">
                <name>IRON/SULFUR CLUSTER</name>
                <molecular_weight>
                    <theoretical units="MDa">0.00035163999999999996</theoretical>
                </molecular_weight>
                <number_of_copies>3</number_of_copies>
                <formula>SF4</formula>
            </ligand>
            <ligand macromolecule_id="14">
                <name>1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE</name>
                <molecular_weight>
                    <theoretical units="MDa">0.00072297</theoretical>
                </molecular_weight>
                <number_of_copies>2</number_of_copies>
                <formula>LHG</formula>
            </ligand>
            <ligand macromolecule_id="15">
                <name>CHLOROPHYLL D ISOMER</name>
                <molecular_weight>
                    <theoretical units="MDa">0.000895462</theoretical>
                </molecular_weight>
                <number_of_copies>1</number_of_copies>
                <formula>G9R</formula>
            </ligand>
            <ligand macromolecule_id="16">
                <name>PHEOPHYTIN A</name>
                <molecular_weight>
                    <theoretical units="MDa">0.0008712</theoretical>
                </molecular_weight>
                <number_of_copies>2</number_of_copies>
                <formula>PHO</formula>
            </ligand>
            <ligand macromolecule_id="17">
                <name>(6'R,11cis,11'cis,13cis,15cis)-4',5'-didehydro-5',6'-dihydro-beta,beta-carotene</name>
                <molecular_weight>
                    <theoretical units="MDa">0.000536873</theoretical>
                </molecular_weight>
                <number_of_copies>13</number_of_copies>
                <formula>8CT</formula>
            </ligand>
            <ligand macromolecule_id="18">
                <name>1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE</name>
                <molecular_weight>
                    <theoretical units="MDa">0.0007871579999999999</theoretical>
                </molecular_weight>
                <number_of_copies>1</number_of_copies>
                <formula>LMG</formula>
            </ligand>
        </macromolecule_list>
    </sample>
    <structure_determination_list>
        <structure_determination structure_determination_id="1">
            <method>singleParticle</method>
            <aggregation_state>particle</aggregation_state>
            <specimen_preparation_list>
                <single_particle_preparation preparation_id="1">
                    <buffer>
                        <ph>6.5</ph>
                    </buffer>
                    <grid>
                        <model>Quantifoil R2/1</model>
                        <material>GOLD</material>
                        <mesh>300</mesh>
                        <support_film film_type_id="1">
                            <film_material>GRAPHENE OXIDE</film_material>
                            <film_topology>HOLEY ARRAY</film_topology>
                        </support_film>
                    </grid>
                    <vitrification>
                        <cryogen_name>ETHANE</cryogen_name>
                        <chamber_humidity units="percentage">100</chamber_humidity>
                    </vitrification>
                </single_particle_preparation>
            </specimen_preparation_list>
            <microscopy_list>
                <single_particle_microscopy microscopy_id="1">
                    <microscope>FEI TITAN KRIOS</microscope>
                    <illumination_mode>FLOOD BEAM</illumination_mode>
                    <imaging_mode>BRIGHT FIELD</imaging_mode>
                    <electron_source>FIELD EMISSION GUN</electron_source>
                    <acceleration_voltage units="kV">300</acceleration_voltage>
                    <c2_aperture_diameter units="µm">70.0</c2_aperture_diameter>
                    <nominal_cs units="mm">2.7</nominal_cs>
                    <nominal_defocus_min units="µm">2.5</nominal_defocus_min>
                    <calibrated_defocus_min units="µm">2.5</calibrated_defocus_min>
                    <nominal_defocus_max units="µm">3.0</nominal_defocus_max>
                    <calibrated_defocus_max units="µm">3.0</calibrated_defocus_max>
                    <nominal_magnification>22500.0</nominal_magnification>
                    <calibrated_magnification>38244.0</calibrated_magnification>
                    <specimen_holder_model>FEI TITAN KRIOS AUTOGRID HOLDER</specimen_holder_model>
                    <cooling_holder_cryogen>NITROGEN</cooling_holder_cryogen>
                    <alignment_procedure>
                        <coma_free/>
                    </alignment_procedure>
                    <image_recording_list>
                        <image_recording image_recording_id="1">
                            <film_or_detector_model>GATAN K2 SUMMIT (4k x 4k)</film_or_detector_model>
                            <detector_mode>SUPER-RESOLUTION</detector_mode>
                            <digitization_details>
                                <dimensions>
                                    <width units="pixel">3710</width>
                                    <height units="pixel">3838</height>
                                </dimensions>
                                <frames_per_image>1-40</frames_per_image>
                            </digitization_details>
                            <average_exposure_time units="s">10.0</average_exposure_time>
                            <average_electron_dose_per_image units="e/Å^2">47.0</average_electron_dose_per_image>
                        </image_recording>
                    </image_recording_list>
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        <label>::::EMDATABANK.org::::EMD-30882::::</label>
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</emd>
