REL PDBe PDBe PDBe 2015-06-21 2015-07-01 2015-09-30 2015-10-07 ZM197 SOSIP.664 trimer in complex with VRC01 Fab Lee JH Ward AB HIV-1, Env, antibody, broadly neutralizing antibodies Julien JP Lee JH Ozorowski G Hua Y Torrents de la Pena A de Taeye SW Nieusma T Cupo A Yasmeen A Golabek M Pugach P Klasse PJ Moore JP Sanders RW Ward AB Wilson IA Design and structure of two HIV-1 clade C SOSIP.664 trimers that increase the arsenal of native-like Env immunogens PROC.NAT.ACAD.SCI.USA 112 11947 11952 2015 26372963 doi:10.1073/pnas.1507793112 Fab of VRC01 antibody bound to a clade C ZM176 SOSIP.664 trimer Fab of VRC01 antibody bound to a clade C ZM176 SOSIP.664 trimer Each VRC01 Fab binds a gp120 on the trimer 2 0.57 HIV-1 Env Human immunodeficiency virus 1 ZM197M HIV-1 0.42
A SOSIP trimer with the ZM197M isolate sequence with the following mutations: D156N, E295N, V297T and D332N.
1 Trimer true Homo sapiens HEK293F pPPI4 VRC01 Antibody Homo sapiens Human Plasma 0.5
Each Fab consists of a heavy chain-light chain dimer
3 heterodimer true Homo sapiens HEK293F singleParticle particle 1.00 7.4
20 mM Tris, 150 mM NaCl
400 mesh carbon support C-flat holey grids
 ETHANE 90 HOMEMADE PLUNGER Added DDM to 0.01% (w/v) to the sample immediately prior to applying sample on grid. Manually blotted and plunged into liquid ethane. FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 2.7 1.7 3.5 25500.0 FEI TITAN KRIOS AUTOGRID HOLDER 180 180 Objective astigmatism was corrected 2014-12-06 GATAN K2 (4k x 4k) 1914 30.51
Each image is an aligned sum of 32 frames recorded on the K2.
Whole micrograph
 C3 OTHER 9.32 OTHER Relion 4903 emd_3059.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 256 256 256 0 0 0 256 256 256 335.36 335.36 335.36 90.0 90.0 90.0 X Y Z -0.01488768 0.05336612 0.00020703 0.00376369 1.31 1.31 1.31 0.023 AUTHOR Single particle reconstruction of the ZM197 SOSIP + VRC01 Fab complex.
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emd_3059.png