2024-10-16 REL PDBj PDBj PDBj 2020-06-07 2020-07-29 2020-07-29 2024-10-16 Chinese Academy of Sciences KJZD-SW-L05 China E30 F-particle in complex with CD55 Wang K Zhu L Echovirus 30, mature, attachement receptor, VIRUS Wang K Zhu L Sun Y Li M Zhao X Cui L Zhang L Gao GF Zhai W Zhu F Rao Z Wang X Structures of Echovirus 30 in complex with its receptors inform a rational prediction for enterovirus receptor usage. Nat Commun UK 11 4421 4421 2020 32887891 doi:10.1038/s41467-020-18251-9 2041-1723 7c9w FULLOVERLAP E30 F-particle in complex with CD55 E30 F-particle in complex with CD55 0 1 2 3 4 5 Echovirus E30 E30 F-particle in complex with FcRn 1 1 2 3 4 CD55 or DAF (decay-accelerating factor) 1 5 VP1 Echovirus E30 0.033091008 1 LEVO NDPESALNRAVGRVADTVASGPVNTEQIPALTAVETGHTSQVVPSDTMQTRHVINYHTRSESSIENFMGRAACVYIAQYA TEKVNDELDRYTNWEITTRQVAQLRRKLEMFTYMRFDLEITFVITSSQRTSTTYASDSPPLTHQVMYVPPGGPIPKSYED FAWQTSTNPSVFWTEGNAPPRMSIPFMSVGNAYCNFYDGWSHFSQSGVYGYTTLNNMGHLYFRHVNKSTAYPVNSVARVY FKPKHVKAWVPRAPRLCPYLKARNVNFNVQGVTESRNKITLDRSTHNPLANT VP2 Echovirus E30 0.028878502 1 LEVO SPTVEECGYSDRVRSITLGNSTITTQECANVVVGYGVWPTYLSDHEATAVDQPTQPDVATCRFYTLESVKWESSSAGWWW KFPEALSDMGLFGQNMQYHYLGRTGYTIHVQCNASKFHQGCLLVVCVPEAEMGAATTDHAFNHTKLSNIGQAMEFSAKKS TDQTGPQTAVHNAGMGVAVGNLTIFPHQWINLRTNNSATIVMPYINSVPMDNMYRHYNFTLMVIPFAKLEHSPQASTYVP ITVTVAPMCAEYNGLRLAGHQ VP3 Echovirus E30 0.026157530999999998 1 LEVO GLPTMNTPGSTQFLTSDDFQSPSAMPQFDVTPEIQIPGQVRNLMEIAEVDSVVPVNNTEGHVNSMEAYRIPVRPQTSSGE QVFGFQLQPGHDSVLKHTLLGEILNYYANWSGSMKLTFMYCGAAMATGKFLIAYSPPGAGVPGSRRDAMLGTHVIWDVGL QSSCVLCVPWISQTNYRYVTSDAYTDAGYITCWYQTSIVTPPDIPTTSTILCFVSACNDFSVRLLRDTPFITQQALFQ VP4 Echovirus E30 0.007437145 1 LEVO GAQVSTQKTGAHETGLNASGNSIIHYTNINYYKDSASNSLNRQDFTQDPSKFTEPVKDVMIKTLPALN Q33C85 Complement decay-accelerating factor Homo sapiens 0.021307958999999998 1 Homo sapiens LEVO CNRSCEVPTRLNSASLKQPYITQNYFPVGTVVEYECRPGYRREPSLSPKLTCLQNLKWSTAVEFCKKKSCPNPGEIRNGQ IDVPGGILFGATISFSCNTGYKLFGSTSSFCLISGSSVQWSDPLPECREIYCPAPPQIDNGIIQGERDHYGYRQSVTYAC NKGFTMIGEHSIYCTVNNDEGEWSGPPPECRG P08174 SPHINGOSINE 0.000299492 1 SPH MYRISTIC ACID 0.000228371 1 MYR singleParticle particle 7.4 Quantifoil R1.2/1.3 GOLD CARBON HOLEY PLASMA CLEANING ETHANE 100 FEI VITROBOT MARK I FEI TITAN KRIOS FLOOD BEAM DARK FIELD FIELD EMISSION GUN 300 1.2 2.5 FEI TITAN KRIOS AUTOGRID HOLDER NITROGEN GATAN K2 SUMMIT (4k x 4k) SUPER-RESOLUTION 30.0 1 3.6 FSC 0.143 CUT-OFF RELION 3.0 1016 PROJECTION MATCHING PROJECTION MATCHING RELION emd_30319.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 300 300 300 0 0 0 300 300 300 394.2 394.2 394.2 90.0 90.0 90.0 X Y Z -0.081763074 0.12886067 0.0016237531 0.012587523 1.314 1.314 1.314 0.032 AUTHOR RIGID BODY FIT REAL