2024-03-27 REL PDBj PDBj PDBj 2020-05-26 2020-12-23 2020-12-23 2024-03-27 Cryo-EM structure of the Cas12f1-sgRNA-target DNA complex Takeda NS Nakagawa R Cas12f, Cas14, sgRNA, target DNA, CRISPR, RNA BINDING PROTEIN-RNA-DNA complex Takeda SN Nakagawa R Okazaki S Hirano H Kobayashi K Kusakizako T Nishizawa T Yamashita K Nishimasu H Nureki O Structure of the miniature type V-F CRISPR-Cas effector enzyme. Mol.Cell US 81 558 570.e3 2021 33333018 doi:10.1016/j.molcel.2020.11.035 1097-2765 2168 MOCEFL 7c7l FULLOVERLAP Cryo-EM structure of the Cas12f1-sgRNA-target DNA complex Cryo-EM structure of the Cas12f1-sgRNA-target DNA complex 0 1 2 3 4 uncultured archaeon Cas12f1 1 1 sgRNA 1 2 target DNA 1 3 4 CRISPR-associated protein Cas14a.1 uncultured archaeon 0.06274859799999999 2 Escherichia coli LEVO MGHHHHHHGSMAKNTITKTLKLRIVRPYNSAEVEKIVADEKNNREKIALEKNKDKVKEACSKHLKVAAYCTTQVERNACL FCKARKLDDKFYQKLRGQFPDAVFWQEISEIFRQLQKQAAEIYNQSLIELYYEIFIKGKGIANASSVEHYLSDVCYTRAA ELFKNAAIASGLRSKIKSNFRLKELKNMKSGLPTTKSDNFPIPLVKQKGGQYTGFEISNHNSDFIIKIPFGRWQVKKEID KYRPWEKFDFEQVQKSPKPISLLLSTQRRKRNKGWSKDEGTEAEIKKVMNGDYQTSYIEVKRGSKIGEKSAWMLNLSIDV PKIDKGVDPSIIGGIAVGVKSPLVCAINNAFSRYSISDNDLFHFNKKMFARRRILLKKNRHKRAGHGAKNKLKPITILTE KSERFRKKLIERWACEIADFFIKNKVGTVQMENLESMKRKEDSYFNIRLRGFWPYAEMQNKIEFKLKQYGIEIRKVAPNN TSKTCSKCGHLNNYFNFEYRKKNKFPHFKCEKCNFKENADYNAALNISNPKLKSTKEEP A0A482D308 sgRNA uncultured archaeon 0.058133542999999996 1 UUCACUGAUAAAGUGGAGAACCGCUUCACCAAAAGCUGUCCCUUAGGGGAUUAGAACUUGAGUGAAGGUGGGCUGCUUGC AUCAGCCUAAUGUCGAGAAGUGCUUUCUUCGGAAAGUAACCCUCGAAACAAAUUCAUUUGAAAGAAUGAAGGAAUGCAAC GGAAAUUAGGUGCGCUUGGC DNA (40-mer) synthetic construct 0.012297954 1 (DG)(DA)(DA)(DT)(DG)(DG)(DT)(DT)(DG)(DC)(DC)(DA)(DA)(DG)(DC)(DG)(DC)(DA)(DC)(DC) (DT)(DA)(DA)(DT)(DT)(DT)(DC)(DC)(DC)(DA)(DA)(DA)(DT)(DT)(DA)(DG)(DA)(DA)(DA)(DA) DNA DNA (40-mer) synthetic construct 0.012323922 1 (DT)(DT)(DT)(DT)(DC)(DT)(DA)(DA)(DT)(DT)(DT)(DG)(DG)(DG)(DA)(DA)(DA)(DT)(DT)(DA) (DG)(DG)(DT)(DG)(DC)(DG)(DC)(DT)(DT)(DG)(DG)(DC)(DA)(DA)(DC)(DC)(DA)(DT)(DT)(DC) DNA ZINC ION 6.5409e-05 3 ZN singleParticle particle 8.0 ETHANE FEI TITAN KRIOS OTHER BRIGHT FIELD FIELD EMISSION GUN 300 GATAN K3 (6k x 4k) 48.7 1 C1 3.3 FSC 0.143 CUT-OFF 87253 RANDOM ASSIGNMENT RELION 3.0 MAXIMUM LIKELIHOOD RELION 3.0 emd_30299.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 150 150 150 0 0 0 150 150 150 157.6995 157.6995 157.6995 90.0 90.0 90.0 X Y Z -0.123241425 0.21197207 0.0009314228 0.008136102 1.05133 1.05133 1.05133 0.025 AUTHOR emd_30299_msk_1.map emd_30299_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 150 150 150 0 0 0 150 150 150 157.6995 157.6995 157.6995 90.0 90.0 90.0 X Y Z -0.034893006 0.08034681 0.00029802037 0.0052821985 1.05133 1.05133 1.05133 AUTHOR emd_30299_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 150 150 150 0 0 0 150 150 150 157.6995 157.6995 157.6995 90.0 90.0 90.0 X Y Z -0.0376938 0.08647904 0.0002950042 0.00527965 1.05133 1.05133 1.05133 AUTHOR