REL PDBe PDBe PDBe 2015-05-27 2015-08-12 2015-08-12 2016-03-09 Electron cryo-microscopy of porcine Factor VIII bound to lipid nanotubes and single particle tomography reconstruction Dalm D Galaz-Montoya JG Miller JL Grushin K Villalobos A Koyfman AY Schmid MF Stoilova-McPhie S Blood coagulation factor VIII, Lipid nanotubes, Cryo-electron microscopy, Membrane-bound organization, Single particle tomography reconstruction Dalm D Galaz-Montoya JG Miller JL Grushin K Villalobos A Koyfman AY Schmid MF Stoilova-McPhie S Dimeric Organization of Blood Coagulation Factor VIII bound to Lipid Nanotubes. SCI.REP. 5 11212 11212 2015 26082135 doi:10.1038/srep11212 Galaz-Montoya JG Flanagan J Schmid MF Ludtke SJ Single particle tomography in EMAN2 J Structural Biology 2015 25956334 doi:10.1016/j.jsb.2015.04.016 Helically organized porcine blood coagulation Factor VIII bound to a lipid nanotube Helically organized porcine blood coagulation Factor VIII bound to a lipid nanotube
The protein was monodisperse in solution and bound to the lipid nanotube in 1:1 w/w ratio to achieve helical organization
dimer 2 0.17 0.17 SDS gel and amino acid sequence Blood coagulation Factor VIII Sus scrofa PIG blood 0.17 0.17
Recombinant porcine Factor VIII lacking the B domain was bound to lipid nanotubes and helically organized for structure analysis by cryo-EM.
4 2 true Cricetulus griseus BHK LIPID NANOTUBE unidentified false subtomogramAveraging helicalArray 1.0 7.4
20 mM HEPES, 150 mM NaCL, 5 mM CaCl2
 NEGATIVE
The pFVIII-LNT ehlcial tubes were absorbed on amorphous carbon and stained with 1% Uranyl acetate
Evaporated carbon on mice was floated on 300 mesh copper grids, dried, glow discharged for 10 seconds
 NONE OTHER
The protein and lipid are mixed in 1:1 ration and incubated for 15 minutes
 JEOL 2100 FLOOD BEAM BRIGHT FIELD LAB6 200 2.0 -0.001 -0.0025 40000.0 52000.0 SIDE ENTRY, EUCENTRIC 2014-10-10 GATAN ULTRASCAN 4000 (4k x 4k) 20 2 60
described in details in the submitted references
36 35.5 C5 21.0 OTHER EMAN2 756 emd_3026.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 96 96 96 0 0 0 96 96 96 278.40002 278.40002 278.40002 90.0 90.0 90.0 X Y Z 0.0 699.017517089999956 30.404388430000001 84.800666809999996 2.9000003 2.9000003 2.9000003 30.0 AUTHOR SPT reconstruction from tomograms of negatively stained porcine FVIII bound to LNT in a helical organization. The volume is low pass filter to 20 Angstroms in EMAN2
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 3CDZ A B RIGID BODY FIT UCSF Chimera REAL