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    <admin>
        <current_status>
            <date>2024-03-27</date>
            <code>REL</code>
            <processing_site>PDBj</processing_site>
        </current_status>
        <sites>
            <deposition>PDBj</deposition>
            <last_processing>PDBj</last_processing>
        </sites>
        <key_dates>
            <deposition>2020-03-31</deposition>
            <header_release>2020-05-20</header_release>
            <map_release>2020-05-20</map_release>
            <update>2024-03-27</update>
        </key_dates>
        <grant_support>
            <grant_reference>
                <funding_body>Department of Biotechnology (DBT, India)</funding_body>
                <code>IA/14/2/501533</code>
                <country>India</country>
            </grant_reference>
            <grant_reference>
                <funding_body>Department of Biotechnology (DBT, India)</funding_body>
                <code>DBT/PR12422/MED/31/287/2014</code>
                <country>India</country>
            </grant_reference>
        </grant_support>
        <title>F-actin-ADP-state</title>
        <authors_list>
            <author>Kumari A</author>
            <author>Ragunath VK</author>
        </authors_list>
        <keywords>F-actin, ADP-F-actin, CONTRACTILE PROTEIN</keywords>
    </admin>
    <crossreferences>
        <citation_list>
            <primary_citation>
                <journal_citation published="true">
                    <author order="1">Kumari A</author>
                    <author order="2">Kesarwani S</author>
                    <author order="3">Javoor MG</author>
                    <author order="4">Vinothkumar KR</author>
                    <author ORCID="0000-0001-5742-2130" order="5">Sirajuddin M</author>
                    <title>Structural insights into actin filament recognition by commonly used cellular actin markers.</title>
                    <journal_abbreviation>Embo J.</journal_abbreviation>
                    <country>UK</country>
                    <volume>39</volume>
                    <first_page>e104006</first_page>
                    <last_page>e104006</last_page>
                    <year>2020</year>
                    <external_references type="PUBMED">32567727</external_references>
                    <external_references type="DOI">doi:10.15252/embj.2019104006</external_references>
                    <external_references type="ISSN">1460-2075</external_references>
                    <external_references type="CSD">0897</external_references>
                    <external_references type="ASTM">EMJODG</external_references>
                </journal_citation>
            </primary_citation>
        </citation_list>
        <emdb_list>
            <emdb_reference>
                <emdb_id>EMD-30085</emdb_id>
                <relationship>
                    <other>other EM volume</other>
                </relationship>
            </emdb_reference>
        </emdb_list>
        <pdb_list>
            <pdb_reference>
                <pdb_id>7bt7</pdb_id>
                <relationship>
                    <in_frame>FULLOVERLAP</in_frame>
                </relationship>
            </pdb_reference>
        </pdb_list>
    </crossreferences>
    <sample>
        <name>Filamentous actin in ADP state</name>
        <supramolecule_list>
            <complex_supramolecule supramolecule_id="1">
                <name>Filamentous actin in ADP state</name>
                <parent>0</parent>
                <macromolecule_list>
                    <macromolecule>
                        <macromolecule_id>1</macromolecule_id>
                    </macromolecule>
                </macromolecule_list>
                <natural_source database="NCBI">
                    <organism ncbi="9031">Gallus gallus</organism>
                </natural_source>
            </complex_supramolecule>
        </supramolecule_list>
        <macromolecule_list>
            <protein_or_peptide macromolecule_id="1">
                <name>Actin, alpha skeletal muscle</name>
                <natural_source database="NCBI">
                    <organism ncbi="9031">Gallus gallus</organism>
                </natural_source>
                <molecular_weight>
                    <theoretical units="MDa">0.042096953</theoretical>
                </molecular_weight>
                <number_of_copies>5</number_of_copies>
                <enantiomer>LEVO</enantiomer>
                <sequence>
                    <string>MCDEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITN
WDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDG
VTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEIT
ALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF</string>
                    <external_references type="UNIPROTKB">P68139</external_references>
                </sequence>
            </protein_or_peptide>
            <ligand macromolecule_id="2">
                <name>MAGNESIUM ION</name>
                <molecular_weight>
                    <theoretical units="MDa">2.4305e-05</theoretical>
                </molecular_weight>
                <number_of_copies>5</number_of_copies>
                <formula>MG</formula>
            </ligand>
            <ligand macromolecule_id="3">
                <name>ADENOSINE-5'-DIPHOSPHATE</name>
                <molecular_weight>
                    <theoretical units="MDa">0.000427201</theoretical>
                </molecular_weight>
                <number_of_copies>5</number_of_copies>
                <formula>ADP</formula>
            </ligand>
        </macromolecule_list>
    </sample>
    <structure_determination_list>
        <structure_determination structure_determination_id="1">
            <method>helical</method>
            <aggregation_state>filament</aggregation_state>
            <specimen_preparation_list>
                <helical_preparation preparation_id="1">
                    <concentration units="mg/mL">0.0002</concentration>
                    <buffer>
                        <ph>8.0</ph>
                    </buffer>
                    <grid>
                        <model>Quantifoil R1.2/1.3</model>
                        <material>GOLD</material>
                        <mesh>300</mesh>
                        <support_film film_type_id="1">
                            <film_material>CARBON</film_material>
                            <film_topology>HOLEY</film_topology>
                            <film_thickness>50.0</film_thickness>
                        </support_film>
                        <pretreatment>
                            <type>GLOW DISCHARGE</type>
                            <time units="s">60</time>
                            <atmosphere>AIR</atmosphere>
                            <pressure units="kPa">0.025</pressure>
                        </pretreatment>
                    </grid>
                    <vitrification>
                        <cryogen_name>ETHANE</cryogen_name>
                        <chamber_humidity units="percentage">95</chamber_humidity>
                        <chamber_temperature units="K">293</chamber_temperature>
                        <instrument>FEI VITROBOT MARK I</instrument>
                        <details>blot for 3.5 seconds. </details>
                    </vitrification>
                </helical_preparation>
            </specimen_preparation_list>
            <microscopy_list>
                <helical_microscopy microscopy_id="1">
                    <microscope>FEI TITAN KRIOS</microscope>
                    <illumination_mode>OTHER</illumination_mode>
                    <imaging_mode>OTHER</imaging_mode>
                    <electron_source>FIELD EMISSION GUN</electron_source>
                    <acceleration_voltage units="kV">300</acceleration_voltage>
                    <c2_aperture_diameter units="µm">50.0</c2_aperture_diameter>
                    <nominal_cs units="mm">2.7</nominal_cs>
                    <calibrated_magnification>75000.0</calibrated_magnification>
                    <specimen_holder_model>FEI TITAN KRIOS AUTOGRID HOLDER</specimen_holder_model>
                    <cooling_holder_cryogen>NITROGEN</cooling_holder_cryogen>
                    <temperature>
                        <temperature_min units="K">100.0</temperature_min>
                        <temperature_max units="K">120.0</temperature_max>
                    </temperature>
                    <alignment_procedure>
                        <coma_free/>
                    </alignment_procedure>
                    <image_recording_list>
                        <image_recording image_recording_id="1">
                            <film_or_detector_model>FEI FALCON III (4k x 4k)</film_or_detector_model>
                            <detector_mode>INTEGRATING</detector_mode>
                            <number_grids_imaged>1</number_grids_imaged>
                            <number_real_images>529</number_real_images>
                            <average_exposure_time units="s">2.0</average_exposure_time>
                            <average_electron_dose_per_image units="e/Å^2">49.2</average_electron_dose_per_image>
                            <details>30</details>
                        </image_recording>
                    </image_recording_list>
                </helical_microscopy>
            </microscopy_list>
            <helical_processing image_processing_id="1">
                <image_recording_id>1</image_recording_id>
                <final_reconstruction>
                    <applied_symmetry>
                        <helical_parameters>
                            <delta_z units="Å">27.5</delta_z>
                            <delta_phi units="deg">-166.6</delta_phi>
                            <axial_symmetry>C1</axial_symmetry>
                        </helical_parameters>
                    </applied_symmetry>
                    <resolution units="Å" res_type="BY AUTHOR">3.8</resolution>
                    <resolution_method>FSC 0.143 CUT-OFF</resolution_method>
                    <software_list>
                        <software>
                            <name>RELION</name>
                            <version>3.0</version>
                        </software>
                    </software_list>
                    <number_images_used>64194</number_images_used>
                </final_reconstruction>
                <segment_selection>
                    <number_selected>111074</number_selected>
                </segment_selection>
                <startup_model type_of_model="INSILICO MODEL">
                    <insilico_model>cylinder</insilico_model>
                </startup_model>
                <final_angle_assignment>
                    <type>NOT APPLICABLE</type>
                    <software_list>
                        <software>
                            <name>RELION</name>
                            <version>3.0</version>
                        </software>
                    </software_list>
                </final_angle_assignment>
            </helical_processing>
        </structure_determination>
    </structure_determination_list>
    <map format="CCP4" size_kbytes="131073">
        <file>emd_30171.map.gz</file>
        <symmetry>
            <space_group>1</space_group>
        </symmetry>
        <data_type>IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES)</data_type>
        <dimensions>
            <col>320</col>
            <row>320</row>
            <sec>320</sec>
        </dimensions>
        <origin>
            <col>0</col>
            <row>0</row>
            <sec>0</sec>
        </origin>
        <spacing>
            <x>320</x>
            <y>320</y>
            <z>320</z>
        </spacing>
        <cell>
            <a units="Å">339.19998</a>
            <b units="Å">339.19998</b>
            <c units="Å">339.19998</c>
            <alpha units="deg">90.0</alpha>
            <beta units="deg">90.0</beta>
            <gamma units="deg">90.0</gamma>
        </cell>
        <axis_order>
            <fast>X</fast>
            <medium>Y</medium>
            <slow>Z</slow>
        </axis_order>
        <statistics>
            <minimum>-0.10060532</minimum>
            <maximum>0.22486973</maximum>
            <average>0.00049115956</average>
            <std>0.007607464</std>
        </statistics>
        <pixel_spacing>
            <x units="Å">1.06</x>
            <y units="Å">1.06</y>
            <z units="Å">1.06</z>
        </pixel_spacing>
        <contour_list>
            <contour primary="true">
                <level>0.0477</level>
                <source>AUTHOR</source>
            </contour>
        </contour_list>
        <label>::::EMDATABANK.org::::EMD-30171::::</label>
        <annotation_details>ADP state of Filamentous actin</annotation_details>
    </map>
    <interpretation>
        <modelling_list>
            <modelling>
                <initial_model>
                    <access_code>5ONV</access_code>
                    <chain>
                        <chain_id>A</chain_id>
                        <residue_range>6-373</residue_range>
                        <source_name>PDB</source_name>
                        <initial_model_type>experimental model</initial_model_type>
                    </chain>
                </initial_model>
                <refinement_protocol>RIGID BODY FIT</refinement_protocol>
                <refinement_space>REAL</refinement_space>
                <overall_bvalue>179.0</overall_bvalue>
            </modelling>
        </modelling_list>
    </interpretation>
</emd>
