2026-08-12 REL PDBj INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY STRUCTURE_SUMMARY em_admin entity entity_poly _chem_comp.name _em_admin.last_update _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code STRUCTURE_SUMMARY chem_comp_atom chem_comp_bond database_2 em_admin pdbx_entry_details pdbx_modification_feature _database_2.pdbx_DOI _database_2.pdbx_database_accession _em_admin.last_update _pdbx_entry_details.has_protein_modification REMEDIATION REPOSITORY Metalloprotein remediation STRUCTURE_SUMMARY atom_site chem_comp chem_comp_atom chem_comp_bond em_admin entity entity_poly entity_poly_seq pdbx_entity_instance_feature pdbx_entity_nonpoly pdbx_modification_feature pdbx_nonpoly_atom_coordination pdbx_nonpoly_atom_coordination_sphere pdbx_nonpoly_atom_coordination_sphere_order pdbx_nonpoly_scheme pdbx_poly_seq_scheme pdbx_struct_assembly_gen pdbx_struct_conn_angle pdbx_unobs_or_zero_occ_atoms pdbx_validate_close_contact pdbx_validate_rmsd_bond struct_asym struct_conn _atom_site.B_iso_or_equiv _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.group_PDB _atom_site.label_asym_id _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.type_symbol _chem_comp.formula _chem_comp.formula_weight _chem_comp.id _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.type _em_admin.last_update _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly_seq.mon_id _pdbx_entity_instance_feature.auth_comp_id _pdbx_entity_instance_feature.comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.category _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.type _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_struct_assembly_gen.asym_id_list _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.auth_seq_id_2 PDBj PDBj 2020-03-31 2020-09-30 2020-09-30 2026-08-12 Japan Science and Technology JPMJCR14M4 Japan Japan Agency for Medical Research and Development (AMED) Japan Japan Society for the Promotion of Science (JSPS) 17H03653 Japan Abe K Nishizawa T Flippase, P-type ATPase, P4-ATPase, Phospholipid, MEMBRANE PROTEIN Nakanishi H Nishizawa T Segawa K Nureki O Fujiyoshi Y Nagata S Abe K Cell Rep US 32 108208 108208 2020 32997992 doi:10.1016/j.celrep.2020.108208 2211-1247 7bsu FULLOVERLAP EMDB EMD-30167 associated EM volume

Cryo-EM structure of a human ATP11C-CDC50A flippase in PtdSer-bound E2BeF state

human ATP11C-CDC50A flippase human ATP11C-CDC50A flippase 0 2 Homo sapiens 0.18 ATP11C Homo sapiens 0.124403617 1 Homo sapiens LEVO RFCAGEEKRVGTRTVFVGNHPVSETEAYIAQRFCDNRIVSSKYTLWNFLPKNLFEQFRRIANFYFLIIFLVQVTVDTPTS PVTSGLPLFFVITVTAIKQGYEDWLRHRADNEVNKSTVYIIENAKRVRKESEKIKVGDVVEVQADETFPCDLILLSSCTT DGTCYVTTASLDGESNCKTHYAVRDTIALCTAESIDTLRAAIECEQPQPDLYKFVGRINIYSNSLEAVARSLGPENLLLK GATLKNTEKIYGVAVYTGMETKMALNYQGKSQKRSAVEKSINAFLIVYLFILLTKAAVCTTLKYVWQSTPYNDEPWYNQK TQKERETLKVLKMFTDFLSFMVLFNFIIPVSMYVTVEMQKFLGSFFISWDKDFYDEEINEGALVNTSDLNEELGQVDYVF TDKTGTLTENSMEFIECCIDGHKYKGVTQEVDGLSQTDGTLTYFDKVDKNREELFLRALCLCHTVEIKTNDAVDGATESA ELTYISSSPDEIALVKGAKRYGFTFLGNRNGYMRVENQRKEIEEYELLHTLNFDAVRRRMSVIVKTQEGDILLFCKGADS AVFPRVQNHEIELTKVHVERNAMDGYRTLCVAFKEIAPDDYERINRQLIEAKMALQDREEKMEKVFDDIETNMNLIGATA VEDKLQDQAAETIEALHAAGLKVWVLTGDKMETAKSTCYACRLFQTNTELLELTTKTIEESERKEDRLHELLIEYRKKLL HEFPKSTRSFKKAWTEHQEYGLIIDGSTLSLILNSSQDSSSNNYKSIFLQICMKCTAVLCCRMAPLQKAQIVRMVKNLKG SPITLSIGDGANDVSMILESHVGIGIKGKEGRQAARNSDYSVPKFKHLKKLLLAHGHLYYVRIAHLVQYFFYKNLCFILP QFLYQFFCGFSQQPLYDAAYLTMYNICFTSLPILAYSLLEQHINIDTLTSDPRLYMKISGNAMLQLGPFLYWTFLAAFEG TVFFFGTYFLFQTASLEENGKVYGNWTFGTIVFTVLVFTVTLKLALDTRFWTWINHFVIWGSLAFYVFFSFFWGGIIWPF LKQQRMYFVFAQMLSSVSTWLAIILLIFISLFPEILLIVLKNVR Cell cycle control protein 50A Homo sapiens 0.040900801 1 Homo sapiens LEVO MAMNYNAKDEVDGGPPCAPGGTAKTRRPDNTAFKQQRLPAWQPILTAGTVLPIFFIIGLIFIPIGIGIFVTSNNIREIEI DYTGTEPSSPCNKCLSPDVTPCFCTINFTLEKSFEGNVFMYYGLSNFYQNHRRYVKSRDDSQLNGDSSALLNPSKECEPY RRNEDKPIAPCGAIMNSMFNDTLELFLIGQDSYPIPIALKKKGIAWWTDKNVKFRNPPGGDNLEERFKGTTKPVNWLKPV YMLDSDPDNNGFINEDFIVWMRTAALPTFRKLYRLIERKSDLHPTLPAGRYWLNVTYNYPVHYFDGRKRMILSTISWMGG KNPFLGIAYIAVGSISFLLGVVLLVINHKYRNSSNTADITI Q9NV96 MAGNESIUM ION 2.4305e-05 1 MG O-[(R)-{[(2R)-2,3-bis(octadecanoyloxy)propyl]oxy}(hydroxy)phosphoryl]-L-serine 0.000792075 1 P5S BERYLLIUM TRIFLUORIDE ION 6.600700000000001e-05 1 BEF 2-acetamido-2-deoxy-beta-D-glucopyranose 0.000221208 4 NAG 1-deoxy-alpha-D-mannopyranose 0.000164156 1 AH2 singleParticle particle 8 6.5 ETHANE 99 298 FEI VITROBOT MARK IV TFS KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 GATAN K3 (6k x 4k) 64.0 1 PHASE FLIPPING AND AMPLITUDE CORRECTION 3.2 FSC 0.143 CUT-OFF RELION 3 500000 MAXIMUM LIKELIHOOD MAXIMUM LIKELIHOOD RIGID BODY FIT