2025-07-02 REL PDBj INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY EXPERIMENTAL_SUMMARY em_admin em_software _em_admin.last_update _em_software.name STRUCTURE_SUMMARY em_admin em_software pdbx_entry_details _em_admin.last_update _em_software.name PDBj PDBj 2020-02-22 2020-11-04 2020-11-04 2025-07-02 National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) R01GM058600 United States National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) P41GM103832 United States National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) R01GM079429 United States National Institutes of Health/National Center for Research Resources (NIH/NCRR) S10OD021600 United States National Research Foundation (NRF, Korea) NRF-2019M3E5D6063865 Korea, Republic Of National Science Foundation (NSF, United States) MCB-1942763 United States National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) R01-GM067887 United States Agence Nationale de la Recherche (ANR) ProteaseInAction Grant France 3.6A Yeast Vo state3 prime Roh SH Shekhar M V-ATPase, Vo sub-complex, rotary motor, transport protein Roh SH Shekhar M Pintilie G Chipot C Wilkens S Singharoy A Chiu W Cryo-EM and MD infer water-mediated proton transport and autoinhibition mechanisms of V o complex. Sci Adv US 6 2020 33028525 doi:10.1126/sciadv.abb9605 2375-2548 6m0s FULLOVERLAP V-type proton ATPase Vo sub-complex V-type proton ATPase Vo sub-complex 0 1 2 3 4 5 6 7 8 Saccharomyces cerevisiae 400 V-type proton ATPase subunit a, vacuolar isoform Saccharomyces cerevisiae (strain ATCC 204508 / S288c) ATCC 204508 / S288c 0.094289039 1 Saccharomyces cerevisiae LEVO EKEEAIFRSAEMALVQFYIPQEISRDSAYTLGQLGLVQFRDLNSKVRAFQRTFVNEIRRLDNVERQYRYFYSLLKKHDIK LYEGDTDKYLDGSGELYVPPSGSVIDDYVRNASYLEERLIQMEDATDQIEVQKNDLEQYRFILQSGDEFFLKGDNTDSTS YMDEDMIDANGENIAAAIGASVNYVTGVIARDKVATLEQILWRVLRGNLFFKTVEIEQPVYDVKTREYKHKNAFIVFSHG DLIIKRIRKIAESLDANLYDVDSSNEGRSQQLAKVNKNLSDLYTVLKTTSTTLESELYAIAKELDSWFQDVTREKAIFEI LNKSNYDTNRKILIAEGWIPRDELATLQARLGEMIARLGIDVPSIIQVLDTNHTPPTFHRTNKFTAGFQSICDCYGIAQY REINAGLPTIVTFPFMFAIMFGDMGHGFLMTLAALSLVLNEKKINKMKRGEIFDMAFTGRYIILLMGVFSMYTGFLYNDI FSKTMTIFKSGWKWPDHWKKGESITATSVGTYPIGLDWAWHGTENALLFSNSYKMKLSILMGFIHMTYSYFFSLANHLYF NSMIDIIGNFIPGLLFMQGIFGYLSVCIVYKWAVDWVKDGKPAPGLLNMLINMFLSPGTIDDELYPHQAKVQVFLLLMAL VCIPWLLLVKPLHFKFTHKKKSHEPLPSTEADASSEDLEAQQLISAMDADDAEEEEVGSGSHGEDFGDIMIHQVIHTIEF CLNCVSHTASYLRLWALSLAHAQLSSVLWTMTIQIAFGFRGFVGVFMTVALFAMWFALTCAVLVLMEGTSAMLHSLRLHW VESMSKFFVGEGLPYEPFAFEYKDM P32563 V-type proton ATPase subunit e Saccharomyces cerevisiae (strain ATCC 204508 / S288c) ATCC 204508 / S288c 0.008186875 1 Saccharomyces cerevisiae LEVO MSSFYTVVGVFIVVSAMSVLFWIMAPKNNQAVWRSTVILTLAMMFLMWAITFLCQLHPLVAPRRSDLRPEF Q3E7B6 Uncharacterized protein YPR170W-B Saccharomyces cerevisiae (strain ATCC 204508 / S288c) ATCC 204508 / S288c 0.007487627 1 Saccharomyces cerevisiae LEVO TGKAWCCTVLSAFGVVILSVIAHLFNTNHESFVGSINDPEDGPAVAHTVYLAALVYLVFFVFCGFQVYL P0C5R9 V-type proton ATPase subunit d Saccharomyces cerevisiae (strain ATCC 204508 / S288c) ATCC 204508 / S288c 0.039822484 1 Saccharomyces cerevisiae LEVO MEGVYFNIDNGFIEGVVRGYRNGLLSNNQYINLTQCDTLEDLKLQLSSTDYGNFLSSVSSESLTTSLIQEYASSKLYHEF NYIRDQSSGSTRKFMDYITYGYMIDNVALMITGTIHDRDKGEILQRCHPLGWFDTLPTLSVATDLESLYETVLVDTPLAP YFKNCFDTAEELDDMNIEIIRNKLYKAYLEDFYNFVTEEIPEPAKECMQTLLGFEADRRSINIALNSLQSSDIDPDLKSD LLPNIGKLYPLATFHLAQAQDFEGVRAALANVYEYRGFLETGNLEDHFYQLEMELCRDAFTQQFAISTVWAWMKSKEQEV RNITWIAECIAQNQRERINNYISVY P32366 V-type proton ATPase subunit c'' Saccharomyces cerevisiae (strain ATCC 204508 / S288c) ATCC 204508 / S288c 0.020880686 1 Saccharomyces cerevisiae LEVO SFSHFLYYLVLIVVIVYGLYKLFTGHGSDINFGKFLLRTSPYMWANLGIALCVGLSVVGAAWGIFITGSSMIGAGVRAPR ITTKNLISIIFCEVVAIYGLIIAIVFSSKLTVATAENMYSKSNLYTGYSLFWAGITVGASNLICGIAVGITGATAAISDA ADSALFVKILVIEIFGSILGLLGLIVGLLMAGKASEFQ P23968 V-type proton ATPase subunit c' Saccharomyces cerevisiae (strain ATCC 204508 / S288c) ATCC 204508 / S288c 0.016414615 1 Saccharomyces cerevisiae LEVO SNIYAPLYAPFFGFAGCAAAMVLSCLGAAIGTAKSGIGIAGIGTFKPELIMKSLIPVVMSGILAIYGLVVAVLIAGNLSP TEDYTLFNGFMHLSCGLCVGFACLSSGYAIGMVGDVGVRKYMHQPRLFVGIVLILIFSEVLGLYGMIVALILNTRGSE P32842 V-type proton ATPase subunit c Saccharomyces cerevisiae (strain ATCC 204508 / S288c) ATCC 204508 / S288c 0.016254358 8 Saccharomyces cerevisiae LEVO MTELCPVYAPFFGAIGCASAIIFTSLGAAYGTAKSGVGICATCVLRPDLLFKNIVPVIMAGIIAIYGLVVSVLVCYSLGQ KQALYTGFIQLGAGLSVGLSGLAAGFAIGIVGDAGVRGSSQQPRLFVGMILILIFAEVLGLYGLIVALLLNSRATQDVV P25515 V0 assembly protein 1 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) ATCC 204508 / S288c 0.005752845999999999 1 Saccharomyces cerevisiae LEVO DDILSSIWTEGLLMCLIVSALLLFILIVALSWISNLDITYGALEKSTNPIKK P53262 singleParticle particle 7.4 ETHANE FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 GATAN K2 QUANTUM (4k x 4k) SUPER-RESOLUTION 50.0 1 PHASE FLIPPING AND AMPLITUDE CORRECTION 3.6 FSC 0.143 CUT-OFF 28726 MAXIMUM LIKELIHOOD MAXIMUM LIKELIHOOD emd_30035.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 200 200 200 0 0 0 200 200 200 216.00002 216.00002 216.00002 90.0 90.0 90.0 X Y Z -0.09281197 0.15354532 0.00075943477 0.0071254834 1.08 1.08 1.08 0.01 AUTHOR sharpen emd_30035_additional_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 200 200 200 0 0 0 200 200 200 216.00002 216.00002 216.00002 90.0 90.0 90.0 X Y Z -0.010364397 0.029318875 0.00022974238 0.0023818754 1.08 1.08 1.08 AUTHOR unfil