2024-11-06 REL RCSB RCSB RCSB 2023-03-07 2023-11-08 2023-11-08 2024-11-06 Michael J. Fox Foundation MJFF-008121 United States National Institutes of Health/Office of the Director OD020103-01 United States National Institutes of Health/Office of the Director OD021685-01A1 United States National Institutes of Health/National Institute on Aging (NIH/NIA) AG062418 United States National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) GM114537 United States Department of Energy (DOE, United States) DE-AC02-76SF00515 United States Cancer Prevention and Research Institute of Texas (CPRIT) RP170644 United States Cryo-EM structure of serine 87 O-GlcNAc-modified alpha-synuclein fibrils Balana JA Nguyen AB Saelices L Pratt RM alpha-synuclein, O-GlcNAc, amyloid, fibril, posttranslational modification, PROTEIN FIBRIL Balana AT Mahul-Mellier AL Nguyen BA Horvath M Javed A Hard ER Jasiqi Y Singh P Afrin S Pedretti R Singh V Lee VM Luk KC Saelices L Lashuel HA Pratt MR O-GlcNAc forces an alpha-synuclein amyloid strain with notably diminished seeding and pathology. Nat.Chem.Biol. US 20 646 655 2024 38347213 doi:10.1038/s41589-024-01551-2 1552-4469 8gf7 FULLOVERLAP alpha-synuclein fibrils alpha-synuclein fibrils 0 1
The protein is semi-synthesized.
Homo sapiens Alpha-synuclein Homo sapiens 0.008781004999999998 6 LEVO GLSKAKEGVVAAAEKTKQGVAEAAGKTKEGVLYVGSKTKEGVVHGVATVAEKTKEQVTNVGGAVVTGVTAVAQKTVEGAG SIAAATGFVK P37840 2-acetamido-2-deoxy-beta-D-glucopyranose 0.000221208 6 NAG helical filament 7.4
normal PBS
 Quantifoil R1.2/1.3 COPPER 300 CARBON HOLEY GLOW DISCHARGE ETHANE 100 FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 0.8 2.2 GATAN K3 (6k x 4k) 2 7270 3.6 40.0
3 shots per hole
 1 1 4.926 -0.7 C1 4.8 FSC 0.143 CUT-OFF RELION 3.1 22042 initial model was generated by RELION NOT APPLICABLE RELION 3.1 emd_29980.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 320 320 320 0 0 0 320 320 320 275.2 275.2 275.2 90.0 90.0 90.0 X Y Z -0.01101611 0.01869823 0.00044501404 0.0018156363 0.86 0.86 0.86 0.007 AUTHOR main map. This map was used to build model 6A6B PDB experimental model emd_29980_msk_1.map emd_29980_additional_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 320 320 320 0 0 0 320 320 320 275.2 275.2 275.2 90.0 90.0 90.0 X Y Z -0.006658226 0.013376723 0.00038773744 0.0015676836 0.86 0.86 0.86 AUTHOR this map was reconstructed from 3Drefine step in RELION emd_29980_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 320 320 320 0 0 0 320 320 320 275.2 275.2 275.2 90.0 90.0 90.0 X Y Z -0.01983974 0.02786685 0.00039025777 0.0028471637 0.86 0.86 0.86 AUTHOR half map 2 emd_29980_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 320 320 320 0 0 0 320 320 320 275.2 275.2 275.2 90.0 90.0 90.0 X Y Z -0.020170525 0.028888915 0.0003851515 0.0028438102 0.86 0.86 0.86 AUTHOR half map 1