2024-05-29 REL RCSB RCSB RCSB 2023-02-22 2023-04-12 2023-04-12 2024-05-29 National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) GM136401 United States National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) GM118089 United States National Institutes of Health/National Cancer Institute (NIH/NCI) CA92584 United States Tetramer core subcomplex (conformation 2) of Xenopus laevis DNA polymerase alpha-primase Mullins EA Chazin WJ Eichman BF Primase, DNA polymerase, chimeric RNA-DNA primer, RNA/DNA hybrid, DNA replication, DNA synthesis, REPLICATION Mullins EA Salay LE Durie CL Bradley NP Jackman JE Ohi MD Chazin WJ Eichman BF A mechanistic model of primer synthesis from catalytic structures of DNA polymerase alpha-primase. Nat.Struct.Mol.Biol. US 31 777 790 2024 38491139 doi:10.1038/s41594-024-01227-4 1545-9985 Mullins EA Salay LE Durie CL Bradley NP Jackman JE Ohi MD Chazin WJ Eichman BF A mechanistic model of primer synthesis from catalytic structures of DNA polymerase alpha-primase. Biorxiv US 2023 36993335 doi:10.1101/2023.03.16.533013 2692-8205 EMD-29862 other EM volume EMD-29864 other EM volume EMD-29871 other EM volume EMD-29872 other EM volume EMD-29873 other EM volume EMD-29886 other EM volume EMD-29888 other EM volume EMD-29891 other EM volume Polymerase alpha-primase Polymerase alpha-primase 0 1 2 3 4
Heterotetrameric protein complex
0.3 Polymerase alpha 1 1 2
Heterodimer consisting of POLA1 and POLA2
Xenopus laevis 0.2 Primase 1 3 4
Heterodimer consisting of PRIM1 and PRIM2
Xenopus laevis 0.1 POLA1 Xenopus laevis LEVO SNAADGSQVFRFYWLDAYEDQYSQPGVVYLFGKVWIESADAYVSCCVSVKNIERTVYLLPRENRVQLSTGKDTGAPVSMMHVYQEFNEAVAEKYKIMKFKSKKVDKDYAFEIPDVPASSEYLEVRYSADSPQLPQDLKGETFSHVFGTNTSSLELFLLSRKIKGPSWLEIKSPQLSSQPMSWCKVEAVVTRPDQVSVVKDLAPPPVVVLSLSMKTVQNAKTHQNEIVAIAALVHHTFPLDKAPPQPPFQTHFCVLSKLNDCIFPYDYNEAVKQKNANIEIALTERTLLGFFLAKIHKIDPDVIVGHDIYGFDLEVLLQRINSCKVPFWSKIGRLRRSVMPKLGGRSGFAERNAACGRIICDIEISAKELIRCKSYHLSELVHQILKAERVVIPPENIRNAYNDSVHLLYMLENTWIDAKFILQIMCELNVLPLALQITNIAGNVMSRTLMGGRSERNEYLLLHAFTENNFIVPDKPVFKKMQQTTVEDNDDMGTDQNKNKSRKKAAYAGGLVLEPKVGFYDKFILLLDFNSLYPSIIQEYNICFTTVHREAPSTQKGEDQDEIPELPHSDLEMGILPREIRKLVERRRHVKQLMKQPDLNPDLYLQYDIRQKALKLTANSMYGCLGFSYSRFYAKPLAALVTHQGREILLHTKEMVQKMNLEVIYGDTDSIMINTNCNNLEEVFKLGNRVKSEINKSYKLLEIDIDGIFKSLLLLKKKKYAALTVEPTGDGKYVTKQELKGLDIVRRDWCELAKQAGNYVISQILSDQPRDSIVENIQKKLTEIGENVTNGTVPITQYEINKALTKDPQDYPDKKSLPHVHVALWINSQGGRKVKAGDTISYVICQDGSNLSASQRAYAQEQLQKQENLSIDTQYYLSQQVHPVVARICEPIDGIDSALIAMWLGLDPSQFRAHRHYQQDEENDALLGGPSQLTDEEKYRDCERFKFFCPKCGTENIYDNVFDGSGLQIEPGLKRCSKPECDASPLDYVIQVHNKLLLDIRRYIKKYYSGWLVCEEKTCQNRTRRLPLSFSRNGPICQACSKATLRSEYPEKALYTQLCFYRFIFDWDYALEKVVSEQERGHLKKKLFQESENQYKKLKSTVDQVLSRSGYSEVNLSKLFQTLNTIK Q9DE46 POLA2 Xenopus laevis LEVO SNAMSVSAKSIAEELKVFDVNFEDEEVPEKMVELCTVHRLKEEDMVNEWMAFSTTRNLPLTVGNLNLLEHEVLNKKSARPRPSLKKEKHCGNRDFNTIQELIEVETAEENLLDSYATPAKGSQKRNLSTPEHPQSKRILSINRSPHVLFSPTSFSPSATPSQKYGSRTNRGEVVTTYGELQGTTWNGGSGSNTNVELFTSLDEPLTKMYKFMFQKLMDIREVVSIKIEELGASLKDHFQIDEFTSVSLPAQETVTVLGQIGCDSNGKLNSKSVILEGDREHSAGMQVPVDLSELKDYSLFPGQVVIMEGTNSTGRRFVPTKLYEGVPLPFHQPSKEFEECPQQMVITACGPFTTSDTITYDALKDLIDIVNRDRPDICILLGPFLDAKHEQIENLQLTVTFEDVFKRCLKMIIEGTRPSGCHLVIVPSLRDVHHDPVYPQPPFSCFEPAKEDKERVHFVADPCTLSVNGVVIGMTSTDLLFHMGAEEISSSAGAPDRFSRILRHILTQRSYYPLYPPNEEINIDYEALYSYTPMPVTPDVFIVPSELRYFIKDVTGCICINPGRLTKGLVGGTYARFLVKSGAMGSEGKRSTCISAQVVRV Q6DCZ1 PRIM2 Xenopus laevis LEVO MLFSRDRKYRHNTRLTGDRKGDLYPSSLQFYQHPPTENISLIEFETFAIERLKLLKAVENLGVSYVKNSEEYSKKLELELRKLKFPYRPLHEEISDDVYDLRRKDHISHFILRLAYCQSEDLRRWFIQQEMDLFKFRFGLLTKESVQEFLKLNDLQYVAISEDEKNMHKEDLMNSSFGLSLTKMEDTEFYKVPFQAALDLVRPRKVFLWRGFAFIPHKDIVSIVLNDFRAKLSKALALSARSLPVVQSDERLQPLLNHLSHSYIGQDFSSQSNTGKISLEQIDGFAAKSFPLCMRQLHKSLRENHHLRHGGRMQYGLFLKGIGLTLEQALQFWRLEFTKGKVDSEKFDKVYAYSIRHNYGKEGKRTDYTPYSCMKVILSNPPSQGDYHGCPFRHSDPELLKQKLQSFKVPSSGINQILELVKGMHYQLACQKYFELTHSVDDCGFSLNHPNQYFAESQKLLTGSREIKKEQTARDSPAVTASQLSSSSSSASIPKSQSSAPEMEDLEQIFSEY A0A1L8G3G3 PRIM1 Xenopus laevis LEVO GPHMDLSVYDPASLPDVLPLYYRRLFPFYQYFRWLNYGGVVKNYFQHREFSFTLKDDVYVRYQSFNNQSELEKEMQKMCPYKIDIGAVYSHRPSLHNTVKSGTFQAQEKELVFDIDMTDYDDVRRCCSSADICPKCWTLMTIAVRILDRALAEDFGFKHRLWVYSGRRGVHCWVCDDSARKLSQAERSAVAEYLSVVKGGEETIKKVQLPETIHPFIGKSLKMVERYFEKYALVDQDILENKQCWDKVIALVPEVARESLLREFSKARSSVERWDKLSSCLEATGKDFRRYSNIPKEIMLQFCYPRLDVNVSKGLNHLLKSPFSVHPKTGRISVPIDCKKLDQFDPFSVPTISLICSELDNVSKKEEDEDSAGEGEPEAKKRTRDYKRTSLAPYIKVFEQFLDKLDQSRKGELLNKSDLKKEF Q800A4 singleParticle particle 0.9 7.5 ETHANE FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 2.7 0.8 2.0 105000.0 GATAN K3 BIOQUANTUM (6k x 4k) 1 17820 54.8 1 23007566 Ab initio reconstruction C1 4.2 FSC 0.143 CUT-OFF cryoSPARC 80155 MAXIMUM LIKELIHOOD cryoSPARC MAXIMUM LIKELIHOOD cryoSPARC emd_29889.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 200 200 200 0 0 0 200 200 200 328.0 328.0 328.0 90.0 90.0 90.0 X Y Z -0.78159064 3.4145653 -0.0037650594 0.06927763 1.64 1.64 1.64 0.4 AUTHOR Tetramer core subcomplex (conformation 2) of Xenopus laevis DNA polymerase alpha-primase 8G9F PDB experimental model RIGID BODY FIT REAL emd_29889_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 200 200 200 0 0 0 200 200 200 328.0 328.0 328.0 90.0 90.0 90.0 X Y Z -0.93091846 3.442522 0.00057776313 0.14720774 1.64 1.64 1.64 AUTHOR Tetramer core subcomplex (conformation 2) of Xenopus laevis DNA polymerase alpha-primase (half 2) emd_29889_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 200 200 200 0 0 0 200 200 200 328.0 328.0 328.0 90.0 90.0 90.0 X Y Z -0.94387525 3.6462057 0.00055381877 0.14664122 1.64 1.64 1.64 AUTHOR Tetramer core subcomplex (conformation 2) of Xenopus laevis DNA polymerase alpha-primase (half 1)