2023-04-12 REL RCSB RCSB RCSB 2023-02-22 2023-04-12 2023-04-12 2023-04-12 National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) GM136401 United States National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) GM118089 United States National Institutes of Health/National Cancer Institute (NIH/NCI) CA92584 United States Partial DNA termination subcomplex of Xenopus laevis DNA polymerase alpha-primase Mullins EA Chazin WJ Eichman BF Mullins EA Salay LE Durie CL Jackman JE Ohi MD Chazin WJ Eichman BF A mechanistic model of primer synthesis from catalytic structures of DNA polymerase alpha-primase. Biorxiv US 2023 36993335 doi:10.1101/2023.03.16.533013 2692-8205 EMD-29886 associated EM volume EMD-29862 other EM volume EMD-29864 other EM volume EMD-29871 other EM volume EMD-29872 other EM volume EMD-29873 other EM volume EMD-29888 other EM volume EMD-29889 other EM volume EMD-29891 other EM volume Polymerase alpha-primase with a DNA termination substrate Polymerase alpha-primase with a DNA termination substrate 0 1 2 3
Heterotetrameric protein complex with an RNA-DNA/DNA duplex
0.33 Polymerase alpha 1 1
Heterodimer consisting of POLA1 and POLA2
Xenopus laevis 0.2 Primase 1
Heterodimer consisting of PRIM1 and PRIM2
Xenopus laevis 0.11 DNA termination substrate 1 2 3
RNA-DNA/DNA duplex
synthetic construct 0.03 POLA1 Xenopus laevis Spodoptera frugiperda LEVO SNAADGSQVFRFYWLDAYEDQYSQPGVVYLFGKVWIESADAYVSCCVSVKNIERTVYLLPRENRVQLSTGKDTGAPVSMMHVYQEFNEAVAEKYKIMKFKSKKVDKDYAFEIPDVPASSEYLEVRYSADSPQLPQDLKGETFSHVFGTNTSSLELFLLSRKIKGPSWLEIKSPQLSSQPMSWCKVEAVVTRPDQVSVVKDLAPPPVVVLSLSMKTVQNAKTHQNEIVAIAALVHHTFPLDKAPPQPPFQTHFCVLSKLNDCIFPYDYNEAVKQKNANIEIALTERTLLGFFLAKIHKIDPDVIVGHDIYGFDLEVLLQRINSCKVPFWSKIGRLRRSVMPKLGGRSGFAERNAACGRIICDIEISAKELIRCKSYHLSELVHQILKAERVVIPPENIRNAYNDSVHLLYMLENTWIDAKFILQIMCELNVLPLALQITNIAGNVMSRTLMGGRSERNEYLLLHAFTENNFIVPDKPVFKKMQQTTVEDNDDMGTDQNKNKSRKKAAYAGGLVLEPKVGFYDKFILLLDFNSLYPSIIQEYNICFTTVHREAPSTQKGEDQDEIPELPHSDLEMGILPREIRKLVERRRHVKQLMKQPDLNPDLYLQYDIRQKALKLTANSMYGCLGFSYSRFYAKPLAALVTHQGREILLHTKEMVQKMNLEVIYGDTDSIMINTNCNNLEEVFKLGNRVKSEINKSYKLLEIDIDGIFKSLLLLKKKKYAALTVEPTGDGKYVTKQELKGLDIVRRDWCELAKQAGNYVISQILSDQPRDSIVENIQKKLTEIGENVTNGTVPITQYEINKALTKDPQDYPDKKSLPHVHVALWINSQGGRKVKAGDTISYVICQDGSNLSASQRAYAQEQLQKQENLSIDTQYYLSQQVHPVVARICEPIDGIDSALIAMWLGLDPSQFRAHRHYQQDEENDALLGGPSQLTDEEKYRDCERFKFFCPKCGTENIYDNVFDGSGLQIEPGLKRCSKPECDASPLDYVIQVHNKLLLDIRRYIKKYYSGWLVCEEKTCQNRTRRLPLSFSRNGPICQACSKATLRSEYPEKALYTQLCFYRFIFDWDYALEKVVSEQERGHLKKKLFQESENQYKKLKSTVDQVLSRSGYSEVNLSKLFQTLNTIK DNA template synthetic construct (DT)(DG)(DT)(DA)(DT)(DG)(DT)(DA)(DT)(DG)(DT)(DA)(DT)(DG)(DT)(DC)(DG)(DC)(DT)(DA)(DC)(DA)(DA)(DT)(DC)(DG)(DC)(DT)(DA)(DA)(DG)(DT)(DT)(DC)(DA)(DC)(DG)(DC)(DA)(DG)(DT)(DA)(DT)(DC)(DC)(DT)(DG)(DT)(DA)(DT)(DG)(DT)(DA)(DT)(DG)(DT)(DA)(DT)(DG) DNA RNA-DNA primer synthetic construct (GTP)GAUACUGC(DG)(DT)(DG)(DA)(DA)(DC)(DT)(DT)(DA)(DG)(DC)(DG)(DA)(DT)(DT)(DG)(DT)(DA)(DG)(DOC) DNA singleParticle particle 0.9 7.5 ETHANE FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 2.7 0.8 2.0 105000.0 GATAN K3 BIOQUANTUM (6k x 4k) 1 22893 55.8 1 25216892 Ab initio reconstruction C1 3.9 FSC 0.143 CUT-OFF cryoSPARC 278995 MAXIMUM LIKELIHOOD cryoSPARC MAXIMUM LIKELIHOOD cryoSPARC emd_29886.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 400 400 400 0 0 0 400 400 400 328.0 328.0 328.0 90.0 90.0 90.0 X Y Z -0.28128654 0.8381235 -0.0014583338 0.024696702 0.82 0.82 0.82 0.2 AUTHOR Partial DNA termination subcomplex of Xenopus laevis DNA polymerase alpha-primase emd_29886_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 400 400 400 0 0 0 400 400 400 328.0 328.0 328.0 90.0 90.0 90.0 X Y Z -0.619586 1.0915436 0.00016545501 0.07496074 0.82 0.82 0.82 AUTHOR Partial DNA termination subcomplex of Xenopus laevis DNA polymerase alpha-primase (half 1) emd_29886_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 400 400 400 0 0 0 400 400 400 328.0 328.0 328.0 90.0 90.0 90.0 X Y Z -0.6413416 1.0068566 0.00017263014 0.07499675 0.82 0.82 0.82 AUTHOR Partial DNA termination subcomplex of Xenopus laevis DNA polymerase alpha-primase (half 2)