REL PDBe PDBe PDBe 2015-03-31 2015-05-06 2016-02-10 2016-02-17 Cryo-EM structure of E. coli 70S ribosome bound to additional non-ribosomal proteins. Shasmal M Dey S Shaikh TR Bhakta S Sengupta J ribosome, ribosome assembly, moonlighting proteins. Shasmal M Dey S Shaikh TR Bhakta S Sengupta J E. coli metabolic protein aldehyde-alcohol dehydrogenase-E binds to the ribosome: a unique moonlighting action revealed. SCI.REP. 6 19936 19936 2016 26822933 doi:10.1038/srep19936 E. coli 70S ribosome E. coli 70S ribosome
Monodisperse, single particle form
1 2.5 Escherichia coli 70S ribosome false Escherichia coli MRE600 2.5 ribosome-prokaryote: ALL singleParticle particle 7.5
20 mM Tris-HCl, pH 7.5, 10 mM MgOAc, 30 mM NH4Cl, 5 mM 2-mercaptoethanol
300 mesh carbon coated lacey copper grid
 ETHANE 100 90 GATAN CRYOPLUNGE 3 Blot for 4.3 seconds before plunging FEI TECNAI F20 FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 200 1.2 1.5 4.6 89000.0 88466.0 GATAN LIQUID NITROGEN 85 95 Astigmatism was corrected at 90000 magnification.
Low dose imaging
2013-03-21 TVIPS TEMCAM-F415 (4k x 4k) 4 271 15
Particles are selected first automatically by SPIDER and then manually by Jweb, grouped on the basis of defocus values and aligned by projection matching
CTF correction of 3D map
 C1 OTHER 12.9 OTHER SPIDER 56165 emd_2970.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 230 230 230 0 0 0 230 230 230 388.7 388.7 388.7 90.0 90.0 90.0 X Y Z -129.547348019999987 360.919616700000006 3.2442615 36.168273929999998 1.69 1.69 1.69 14.0 AUTHOR Cryo-EM structure of E. coli 70S ribosome bound to additional non-ribosomal proteins. MapI
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 2J1N A FLEXIBLE FIT PyMOL, MDFF
First manual rigid body fitting followed by flexible fitting by MDFF.
REAL