REL PDBe PDBe PDBe 2015-03-30 2015-04-15 2015-07-15 2015-07-22 Cryo-EM structure of Dengue virus serotype 2 strain New Guinea-C complexed with human antibody 2D22 Fab at 37 degree C. The Fab molecules were added to the virus before 37 degree C incubation. Fibriansah G Ibarra KD Ng TS Smith SA Tan JL Lim XN Ooi JSG Kostyuchenko VA Wang J de Silva AM Harris E Crowe JE Lok SM dengue virus, dengue serotype 2, human antibody, cryo-EM, neutralization Fibriansah G Ibarra KD Ng TS Smith SA Tan JL Lim XN Ooi JSG Kostyuchenko VA Wang J de Silva AM Harris E Crowe JE Lok SM DENGUE VIRUS. Cryo-EM structure of an antibody that neutralizes dengue virus type 2 by locking E protein dimers. SCIENCE 349 88 91 2015 26138979 doi:10.1126/science.aaa8651 4uih FULLOVERLAP Dengue virus serotype 2 strain New Guinea-C complexed with Fab fragments of human antibody 2D22 at 37 degree C. Dengue virus serotype 2 strain New Guinea-C complexed with Fab fragments of human antibody 2D22 at 37 degree C.
The Fab molecules were mixed with the virus before 37 degree C incubation
2 Dengue Virus serotype 2 Dengue Virus serotype 2 New Guinea-C Homo sapiens VERTEBRATES Aedes albopictus C6/36 VIRION STRAIN true false antigen-binding fragment of human antibody 2D22 Homo sapiens Human memory B-cells
120 copies of Fab molecules bind to virus surface
120 false singleParticle particle 8.0
10 mM Tris-HCl pH 8.0, 120 mM NaCl and 1 mM EDTA
ultra-thin carbon-coated lacey carbon grid
 ETHANE 100 FEI VITROBOT MARK IV blotted with filter paper for 2 seconds prior to snap freezing FEI TITAN KRIOS SPOT SCAN BRIGHT FIELD FIELD EMISSION GUN 300 2.7 0.001 0.0036 47000.0 FEI TITAN KRIOS AUTOGRID HOLDER 100 2014-06-13 FEI FALCON II (4k x 4k) 168 20
The particles were manually selected
Each particle
 I OTHER 20.0 OTHER EMAN, EMAN2, MPSA 4288 emd_2968.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 512 512 512 -256 -256 -256 512 512 512 865.28 865.28 865.28 90.0 90.0 90.0 X Y Z -8.583108899999999 10.9272337 -0.10779313 1.00290585 1.69 1.69 1.69 1.5 AUTHOR Reconstruction of Dengue Virus serotype 2 strain New Guinea-C in complex with human antibody 2D22 Fab at 37 degree C. The Fab molecules were added to the virus before 37 degree incubation.
::::EMDATABANK.org::::EMD-2968::::
 4UIF A C E I J K L RIGID BODY FIT Program O
The protein molecules were fitted by manual docking using program O
REAL
emd_2968.png