REL PDBe PDBe PDBe 2015-03-26 2015-05-06 2015-08-26 2015-09-30 Cryo-EM structure of Ross River virus Chen C Wang J C-Y Rayaprolu V Mukhopadhyay S Zlotnick A Ross River virus Wang JC Chen C Rayaprolu V Mukhopadhyay S Zlotnick A Self-Assembly of an Alphavirus Core-Like Particle is Distinguished by Strong Intersubunit Association Energy and Structural Defects. ACS NANO 9 8898 8906 2015 26275088 doi:10.1021/acsnano.5b02632 Cryo-EM structure of Ross River virus Cryo-EM structure of Ross River virus
The virus was purified from Baby Hamster Kidney cells
1 Ross River virus Ross River virus Aedes INVERTEBRATES Mesocricetus auratus BHK-21 cDNA clone of Ross River T48 virus 4 VIRION OTHER true false singleParticle particle 7.4
20 mM Hepes, 150 mM NaCl and 0.1 mM EDTA
 NEGATIVE
cryo-EM
300 mesh copper grid with thin carbon support
 ETHANE 100 FEI VITROBOT MARK III wait 25 sec and blot for 4 sec before plunging JEOL 3200FS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 1.1 1.31 4.01 60000.0 GATAN LIQUID NITROGEN 100 Objective lens astigmatism was corrected at 60,000 times magnification omega filter 0.0 20.0
MDS
2015-03-15 GATAN ULTRASCAN 4000 (4k x 4k) 127 25 626
The particles were selected using e2boxer.py and the images were processed using auto3dem. The initial model was built de novo.
per micrograph
 I OTHER 15.2 OTHER auto3dem 6146 emd_2965.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 441 441 441 -220 -220 -220 441 441 441 811.44 811.44 811.44 90.0 90.0 90.0 X Y Z -0.19181091 0.18434374 0.00858032 0.03060816 1.84 1.84 1.84 0.039 AUTHOR Cryo-EM 3D reconstruction of Ross River virus
::::EMDATABANK.org::::EMD-2965::::
emd_2965.png