2023-11-01 REL RCSB RCSB RCSB 2023-01-12 2023-10-25 2023-10-25 2023-11-01 National Institutes of Health/National Institute of Environmental Health Sciences (NIH/NIEHS) ES102765 United States SETX-Sen1N domain Williams RS Appel CD Helicase, TRANSCRIPTION, DNA repair, RNA-DNA hybrid Appel CD Bermek O Dandey VP Wood M Viverette E Williams JG Bouvette J Riccio AA Krahn JM Borgnia MJ Williams RS Sen1 architecture: RNA-DNA hybrid resolution, autoregulation, and insights into SETX inactivation in AOA2. Mol.Cell US 83 3692 3706.e5 2023 37832548 doi:10.1016/j.molcel.2023.09.024 1097-2765 2168 MOCEFL EMD-29439 other EM volume EMD-29426 other EM volume Chaemtomium thermophilum SETX (Sen1N domain) Chaemtomium thermophilum SETX (Sen1N domain) 0 1 Chaetomium thermophilum SETX Thermochaetoides thermophila LEVO MENNDLYQAA IGWYRAFEDC PPELHLCCPK VDDDDYATYD EPDVVDDSGV PVEEKKRRIS AYEERFQNVY NLSILLGLGK EVAGPWLDEW TRAVDSLLKK CDTCVRNWHR NRDPYLKALH LSPEQVTYLQ SKLDEFDRQR ITEGLQRAKA ILEQYGPMST VKLVDHDMSA VLALYEALCS LPYLARPEHQ PLFDFVFENT QRKKPLRMQG GIIPSMTLFL FDESPVRRRF AETAWENRQP GSITAQEWDW AISGRLADQI VSLSFNRLQT LPPGQKILRF WSGFLFILHA LSEKQIINSL RAMEVSPSIY FLALEHLGTN SDEALAMVLR ALQELMEKSS KAFWQALEQV PPNQLVEEIF KSAAFRPLLN KSLRPELLVT EGDSQVPALA AWMRALVRSL PSTSWSDLCE TSLRHLFETF RSDQAVDQSG RATCTLAGLV TLQQCLDGFL QQDSIDTGTG LIMVNQLLNR VVNYSEIIIR AASLKPGDIY NVGISKAAMA IIHSALALDA KATEVEWAAL IAEKPVQDAV NRDSGALWET FLEMLWAGQL GHFELAKAML MATLRLRSIE QFIPKRKEQL KRELDKFNKR YQQQTTAIGK MLNRLTDFEP EVLDKLCSDP RGQTIHPIVS SLIHGEDAIR EAGFQLLKAI TSESQPSDAV GRMLEVYFTP FLNAFSQAVD KLTATKDANS PWSHMIPILK CSDFVLTGLC DPSSGQLRRK VLTTEEHAAV KRWWECVWQA VDHSFRMMRI WHIKIDKKVM EDFCRDVMEL GNKLLAQDGV MASSLAQESG EDAISKAMRE VLDPPRKCSY SLADMLQLRD KYLVMGIIET IKKLLSRLQE NEMnlpqrtr ghldsmlkkt kqrdgrmdyl tktnltdvqr iellkalged avieeqfmgt kpgdreakek eralkqskld fskagisysg dinehlaqit pnfekyhkss lletlkkeep akpkapakls qqailanqqq ikeararera ekarrdaeai akakalragk tipgegsglq siagvrgkdh apvvkdeimv gsssedegdd dddddvinra ktkskkiwde aerrrlELEA EKLRGPVKKM KILRSAKDMR ARLIPPMDVL HQAILEWDIF HEGNDPPNGY RCGNVSDTYP DPYSYKQTFF PLLINEAWRS FVTAKDETTS KPFGIKVLSR MTVDKFMEVT AAVPAQISKD RGLTEGDIVI ISKGEDPLNQ PQELHCLSRI WKTTYKKDTV EVVYRLNAKG NQILPALTPG SEFQVVKITN MTTIEREYAA LESLQYYDLM DEILKAQPSP MLTFGDEAIK AVMDNYQLNP GQARAILNAK ENDGFTLIQG PPGTGKTKTI VAMVGCLLTG VLKSSNTGav qisrpgagpt ngtapskklL VCAPSNAAVD ELVLRLKAGV KTMNGTFHKI EVLRLGRSDV INAAVKDVTL Delvkarmda elsknsspse rdqlhkeage ikaklaeiRP QLDAARLSDD RASAMKLQRE FDELKRRQAH IGAKIDADKA SGNTYARETE IKRRQIQQEI LDKAQVLCAT LSGSGHEMFK NLNVEFETVI IDEAAQCVEL SALIPLKYGC NKCILVGDPK QLPPTVLSQS AAKYGYDQSL FVRMQKNHPK DVHLLDMQYR MHPEISRFPS KEFYEGLLQD GADMARLRLQ PWHQSVLLGP YRFFDVKGSQ ERGPKNQSLV NEEEVKVAMQ LYMRFRSDYR DIDLTGKIGI ITPYKAQLQR LRQKFVERYG ESITEQIEFN TTDAFQGREC EIIIFSCVRA SPTGGIGFMT DIRRMNVGLT RARSSLWILG DSRALVQGEF WAKLIEDAKQ RDRYTNGNIM ALLSQPGPRV SLESlakqys vpvapvarsk edvemhdtpr tsesippamp yrgsgiggln ergeattptt rggelpiiqs tdgsagkkrp rdaneenrpa fdpakassaf wftqttgigi gidrsfcdgs fgagssnpsa ssatatpsss gtf singleParticle particle 7.9 ETHANE FEI VITROBOT MARK IV FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 1.0 2.7 NITROGEN GATAN K2 SUMMIT (4k x 4k) 40.0 1
Ab initio
 4.49 FSC 0.143 CUT-OFF 74760 MAXIMUM LIKELIHOOD cryoSPARC 3.3.2 MAXIMUM LIKELIHOOD cryoSPARC 3.3.2 emd_29440.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 320 320 320 0 0 0 320 320 320 340.48 340.48 340.48 90.0 90.0 90.0 X Y Z -0.24911405 0.6176358 0.000100737896 0.011812844 1.064 1.064 1.064 0.18 AUTHOR SETX-Sen1N domain main map emd_29440_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 320 320 320 0 0 0 320 320 320 340.48 340.48 340.48 90.0 90.0 90.0 X Y Z -0.20190047 0.4741183 0.00024353279 0.020066226 1.064 1.064 1.064 AUTHOR SETX-Sen1N domain half map A emd_29440_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 320 320 320 0 0 0 320 320 320 340.48 340.48 340.48 90.0 90.0 90.0 X Y Z -0.1726726 0.4673326 0.00025268085 0.020275248 1.064 1.064 1.064 AUTHOR SETX-Sen1N domain half map B