<emd xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" emdb_id="EMD-2900" version="3.0.1.1" xsi:schemaLocation="https://github.com/emdb-empiar/emdb-schemas/blob/master/v3/v3_0_1_1/emdb_relaxed.xsd">
   <admin>
      <current_status>
         <code>REL</code>
         <processing_site>PDBe</processing_site>
      </current_status>
      <sites>
         <deposition>PDBe</deposition>
         <last_processing>PDBe</last_processing>
      </sites>
      <key_dates>
         <deposition>2015-02-10</deposition>
         <header_release>2015-04-01</header_release>
         <map_release>2015-04-29</map_release>
         <update>2015-05-13</update>
      </key_dates>
      <title>Structures of the CRISPR-Cmr complex reveal mode of RNA target positioning</title>
      <authors_list>
         <author>Taylor DW</author>
         <author>Zhu Y</author>
         <author>Staals RHJ</author>
         <author>Kornfeld JE</author>
         <author>Shinkai A</author>
         <author>van der Oost J</author>
         <author>Nogales E</author>
         <author>Doudna JA</author>
      </authors_list>
      <keywords>CRISPR-Cas</keywords>
   </admin>
   <crossreferences>
      <citation_list>
         <primary_citation>
            <journal_citation published="true">
               <author order="1">Taylor DW</author>
               <author order="2">Zhu Y</author>
               <author order="3">Staals RH</author>
               <author order="4">Kornfeld JE</author>
               <author order="5">Shinkai A</author>
               <author order="6">van der Oost J</author>
               <author order="7">Nogales E</author>
               <author order="8">Doudna JA</author>
               <title>Structures of the CRISPR-Cmr complex reveal mode of RNA target positioning.</title>
               <journal>SCIENCE</journal>
               <volume>348</volume>
               <first_page>581</first_page>
               <last_page>585</last_page>
               <year>2015</year>
               <external_references type="PUBMED">25837515</external_references>
               <external_references type="DOI">doi:10.1126/science.aaa4535</external_references>
            </journal_citation>
         </primary_citation>
      </citation_list>
   </crossreferences>
   <sample>
      <name>target-bound CRISPR-Cmr complex</name>
      <supramolecule_list>
         <sample_supramolecule supramolecule_id="1000">
            <name>target-bound CRISPR-Cmr complex</name>
            <number_unique_components>13</number_unique_components>
            <molecular_weight>
               <experimental units="MDa">0.381</experimental>
               <method>MS/MS</method>
            </molecular_weight>
         </sample_supramolecule>
      </supramolecule_list>
      <macromolecule_list>
         <protein_or_peptide macromolecule_id="1">
            <name synonym="Cmr6, TTHB165">CRISPR-associated protein TM1791</name>
            <natural_source database="NCBI">
               <organism ncbi="274">Thermus thermophilus</organism>
            </natural_source>
            <molecular_weight>
               <experimental units="MDa">0.038</experimental>
               <theoretical units="MDa">0.038</theoretical>
            </molecular_weight>
            <number_of_copies>1</number_of_copies>
            <recombinant_exp_flag>false</recombinant_exp_flag>
            <recombinant_expression database="NCBI">
               </recombinant_expression>
            <sequence>
               <external_references type="UNIPROTKB">Q53W04</external_references>
               <external_references type="INTERPRO">IPR010172</external_references>
            </sequence>
         </protein_or_peptide>
         <rna macromolecule_id="2">
            <name>target RNA</name>
            <natural_source database="NCBI">
               <organism ncbi="274">Thermus thermophilus</organism>
            </natural_source>
            <molecular_weight>
               <theoretical units="MDa">0.0162</theoretical>
            </molecular_weight>
            <details>50 nucleotide target RNA</details>
            <classification>OTHER</classification>
            <structure>SINGLE STRANDED</structure>
            <synthetic_flag>true</synthetic_flag>
         </rna>
         <rna macromolecule_id="3">
            <name synonym="crRNA">CRISPR RNA</name>
            <natural_source database="NCBI">
               <organism ncbi="274">Thermus thermophilus</organism>
            </natural_source>
            <details>46 nucleotide endogenous crRNA bound to complex</details>
            <classification>OTHER</classification>
            <structure>SINGLE STRANDED</structure>
            <synthetic_flag>false</synthetic_flag>
         </rna>
         <protein_or_peptide macromolecule_id="4">
            <name synonym="Cmr5, CRISPR type III-B/RAMP module-associated protein Cmr5">CRISPR system Cmr subunit Cmr5</name>
            <natural_source database="NCBI">
               <organism ncbi="274">Thermus thermophilus</organism>
            </natural_source>
            <molecular_weight>
               <experimental units="MDa">0.012</experimental>
               <theoretical units="MDa">0.012</theoretical>
            </molecular_weight>
            <number_of_copies>3</number_of_copies>
            <recombinant_exp_flag>false</recombinant_exp_flag>
            <recombinant_expression database="NCBI">
               </recombinant_expression>
            <sequence>
               <external_references type="UNIPROTKB">Q53W05</external_references>
               <external_references type="GO">GO:0050688</external_references>
               <external_references type="INTERPRO">IPR010160</external_references>
            </sequence>
         </protein_or_peptide>
         <protein_or_peptide macromolecule_id="5">
            <name synonym="Cmr3, TTHB160">CRISPR-associated protein Cmr3</name>
            <natural_source database="NCBI">
               <organism ncbi="274">Thermus thermophilus</organism>
            </natural_source>
            <molecular_weight>
               <experimental units="MDa">0.039</experimental>
               <theoretical units="MDa">0.039</theoretical>
            </molecular_weight>
            <number_of_copies>1</number_of_copies>
            <recombinant_exp_flag>false</recombinant_exp_flag>
            <recombinant_expression database="NCBI">
               </recombinant_expression>
            <sequence>
               <external_references type="UNIPROTKB">Q53W08</external_references>
               <external_references type="INTERPRO">IPR019117</external_references>
            </sequence>
         </protein_or_peptide>
         <protein_or_peptide macromolecule_id="6">
            <name synonym="Cmr2, TTHB160">CRISPR-associated protein Crm2</name>
            <natural_source database="NCBI">
               <organism ncbi="274">Thermus thermophilus</organism>
            </natural_source>
            <molecular_weight>
               <experimental units="MDa">0.065</experimental>
               <theoretical units="MDa">0.065</theoretical>
            </molecular_weight>
            <number_of_copies>1</number_of_copies>
            <recombinant_exp_flag>false</recombinant_exp_flag>
            <recombinant_expression database="NCBI">
               </recombinant_expression>
            <sequence>
               <external_references type="UNIPROTKB">Q53W09</external_references>
               <external_references type="INTERPRO">IPR013407</external_references>
            </sequence>
         </protein_or_peptide>
         <protein_or_peptide macromolecule_id="7">
            <name synonym="Cmr4, TTHB163">CRISPR-associated RAMP Cmr4</name>
            <natural_source database="NCBI">
               <organism ncbi="274">Thermus thermophilus</organism>
            </natural_source>
            <molecular_weight>
               <experimental units="MDa">0.037</experimental>
               <theoretical units="MDa">0.037</theoretical>
            </molecular_weight>
            <number_of_copies>4</number_of_copies>
            <recombinant_exp_flag>false</recombinant_exp_flag>
            <recombinant_expression database="NCBI">
               </recombinant_expression>
            <sequence>
               <external_references type="UNIPROTKB">Q53W06</external_references>
               <external_references type="INTERPRO">IPR013410</external_references>
            </sequence>
         </protein_or_peptide>
         <protein_or_peptide macromolecule_id="8">
            <name synonym="Cmr1, TTHB162">CRISPR-associated protein TM1795</name>
            <natural_source database="NCBI">
               <organism ncbi="274">Thermus thermophilus</organism>
            </natural_source>
            <molecular_weight>
               <experimental units="MDa">0.044</experimental>
            </molecular_weight>
            <number_of_copies>1</number_of_copies>
            <recombinant_exp_flag>false</recombinant_exp_flag>
            <recombinant_expression database="NCBI">
               </recombinant_expression>
            <sequence>
               <external_references type="UNIPROTKB">Q53W07</external_references>
               <external_references type="INTERPRO">IPR007522</external_references>
            </sequence>
         </protein_or_peptide>
      </macromolecule_list>
   </sample>
   <structure_determination_list>
      <structure_determination structure_determination_id="1">
         <method>singleParticle</method>
         <aggregation_state>particle</aggregation_state>
         <specimen_preparation_list>
            <single_particle_preparation preparation_id="1">
               <concentration units="mg/mL">1.0</concentration>
               <buffer>
                  <ph>8.0</ph>
                  <details>20 mM Tris-HCl, pH 8.0, 150 mM NaCl</details>
               </buffer>
               <grid>
                  <details>4/2 C-flat grids with a thin-layer of carbon over the holes</details>
               </grid>
               <vitrification>
                  <cryogen_name>ETHANE</cryogen_name>
                  <chamber_humidity units="percentage">100</chamber_humidity>
                  <chamber_temperature units="K">100</chamber_temperature>
                  <instrument>FEI VITROBOT MARK IV</instrument>
                  <method>Grids were rapidly plunged into liquid ethane using an FEI Vitrobot MarkIV maintained at 4 degrees C after being blotted for 4-4.5 seconds with a blotting force of 15-20.</method>
               </vitrification>
            </single_particle_preparation>
         </specimen_preparation_list>
         <microscopy_list>
            <single_particle_microscopy microscopy_id="1">
               <microscope>FEI TITAN KRIOS</microscope>
               <illumination_mode>FLOOD BEAM</illumination_mode>
               <imaging_mode>BRIGHT FIELD</imaging_mode>
               <electron_source>FIELD EMISSION GUN</electron_source>
               <acceleration_voltage units="kV">300</acceleration_voltage>
               <nominal_cs units="mm">2.7</nominal_cs>
               <nominal_defocus_min units="&#181;m">-2.0</nominal_defocus_min>
               <nominal_defocus_max units="&#181;m">-4.5</nominal_defocus_max>
               <nominal_magnification>29000.0</nominal_magnification>
               <specimen_holder_model>FEI TITAN KRIOS AUTOGRID HOLDER</specimen_holder_model>
               <alignment_procedure>
                  <legacy>
                     <astigmatism>Objective astigmatism was corrected at 210,000 times magnification</astigmatism>
                  </legacy>
               </alignment_procedure>
               <details>Data acquired using Leginon. We collected a 6 s exposure fractionated into 20, 300 ms frames with a dose of 8 electrons per square Angstrom per second.</details>
               <date>2014-07-31</date>
               <image_recording_list>
                  <image_recording>
                     <film_or_detector_model category="CCD">GATAN K2 (4k x 4k)</film_or_detector_model>
                     <number_real_images>4000</number_real_images>
                     <average_electron_dose_per_image units="e/&#8491;^2">48</average_electron_dose_per_image>
                  </image_recording>
               </image_recording_list>
            </single_particle_microscopy>
         </microscopy_list>
         <singleparticle_processing image_processing_id="1">
            <ctf_correction>
               <details>CTFFind3</details>
            </ctf_correction>
            <final_reconstruction>
               <applied_symmetry>
                  <point_group>C1</point_group>
               </applied_symmetry>
               <algorithm>OTHER</algorithm>
               <resolution res_type="BY AUTHOR" units="&#8491;">4.4</resolution>
               <resolution_method>OTHER</resolution_method>
               <software_list>
                  <software>
                     <name>Relion</name>
                  </software>
               </software_list>
               <number_images_used>175000</number_images_used>
            </final_reconstruction>
         </singleparticle_processing>
      </structure_determination>
   </structure_determination_list>
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      <file>emd_2900.map.gz</file>
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      <details>::::EMDATABANK.org::::EMD-2900::::</details>
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   <interpretation>
      <figure_list>
         <figure>
            <file>emd_2900.png</file>
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