2023-10-04 REL RCSB RCSB RCSB 2022-11-04 2023-09-20 2023-09-20 2023-10-04 National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) R01GM113164 United States Apo KIF20A[1-565] class-2 in complex with a microtubule Benoit MPMH Asenjo AB Crozet V Ranaivoson FM Houdusse A Sosa H KIF20A, kinesin, motility, microtubule, tubulin, MOTOR PROTEIN Ranaivoson FM Crozet V Benoit MPMH Abdalla Mohammed Khalid A Kikuti C Sirkia H El Marjou A Miserey-Lenkei S Asenjo AB Sosa H Schmidt CF Rosenfeld SS Houdusse A Nucleotide-free structures of KIF20A illuminate atypical mechanochemistry in this kinesin-6. Open Biology UK 13 230122 230122 2023 37726093 doi:10.1098/rsob.230122 2046-2441 8f18 FULLOVERLAP KIF20A[1-565] apo in complex with a microtubule - class 2 KIF20A[1-565] apo in complex with a microtubule - class 2 0 1 2 3 KIF20A[1-565] apo 1 3 Mus musculus 15R Microtubule 1 1 2 Sus scrofa Brain Tubulin alpha-1B chain Sus scrofa Brain 0.050204445 1 LEVO MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRT GTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVD YGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYR GDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYA KRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGVDSVEGEGEEEGEEY Q2XVP4 Tubulin beta-2B chain Sus scrofa Brain 0.049999887 1 LEVO MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYVPRAILVDLEPGTMDSVRSGP FGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYP DRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGR MSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTG EGMDEMEFTEAESNMNDLVSEYQQYQDATADEQGEFEEEEGEDEA A0A287AGU7 Kinesin-like protein KIF20A Mus musculus 0.064088211 1 Escherichia coli LEVO MSHRILSPPAGLLSDEDVVDSPILESTAADLRSVVRKDLLSDCSVISASLEDKQALLEDTSEKVKVYLRIRPFLTSELDR QEDQGCVCIENTETLVLQAPKDSFALKSNERGVGQATHKFTFSQIFGPEVGQVAFFNLTMKEMVKDVLKGQNWLIYTYGV TNSGKTYTIQGTSKDAGILPQSLALIFNSLQGQLHPTPDLKPLLSNEVIWLDSKQIRQEEMKKLSLLIGGLQEEELSTSV KKRVHTESRIGASNSFDSGVAGLSSTSQFTSSSQLDETSQLWAQPDTVPVSVPADIRFSVWISFFEIYNELLYDLLEPPS HQHKRQTLRLCEDQNGNPYVKDLNWIHVRDVEEAWKLLKVGRKNQSFASTHMNQQSSRSHSIFSIRILHLQGEGDIVPKI SELSLCDLAGSERCKHQKSGERLKEAGNINTSLHTLGRCIAALRQNQQNRSKQNLIPFRDSKLTRVFQGFFTGRGRSCMI VNVNPCASTYDETLHAAKFSALASQLVHAPPVHLGIPSLHSFIKKHSPQVGPGLEKEDKADSDLEDSPEDEADVSVYGKE ELLQVLEHHHHHH P97329 MAGNESIUM ION 2.4305e-05 1 MG GUANOSINE-5'-TRIPHOSPHATE 0.0005231799999999999 1 GTP GUANOSINE-5'-DIPHOSPHATE 0.000443201 1 GDP TAXOL 0.0008539059999999999 1 TA1 helical filament 6.8 40.0 K-PIPES 20.0 Paclitaxel 1.0 Magnesium chloride 1.0 EGTA UltrAuFoil R1.2/1.3 GOLD GOLD HOLEY ETHANE FEI VITROBOT MARK IV FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 0.6 3.4 FEI TITAN KRIOS AUTOGRID HOLDER NITROGEN GATAN K3 (6k x 4k) COUNTING 1-40 56.1 1 5.62 168.09 C1 3.2 FSC 0.143 CUT-OFF RELION 3.1
Number of asymmetric units used is reported in "number of segments used", due to the local processing strategy employed.
119232
manual picking of filaments
 NOT APPLICABLE RELION 3.1 emd_28787.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 416 416 416 0 0 0 416 416 416 351.104 351.104 351.104 90.0 90.0 90.0 X Y Z -0.02461302 0.048413083 -0.00035328016 0.0028070756 0.844 0.844 0.844 0.0106 AUTHOR Primary map, locally refined on the central asymmetric unit FLEXIBLE FIT REAL emd_28787_msk_1.map emd_28787_msk_2.map emd_28787_msk_3.map emd_28787_msk_4.map emd_28787_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 416 416 416 0 0 0 416 416 416 351.104 351.104 351.104 90.0 90.0 90.0 X Y Z -0.029068714 0.04359484 -0.00035266473 0.00402831 0.844 0.844 0.844 AUTHOR Half map from the gold Standard refinement emd_28787_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 416 416 416 0 0 0 416 416 416 351.104 351.104 351.104 90.0 90.0 90.0 X Y Z -0.027255183 0.040650893 -0.00035389562 0.0039966307 0.844 0.844 0.844 AUTHOR Half map from the gold Standard refinement