Vigna radiata supercomplex I+III2 (full bridge)

2026-08-12 REL RCSB INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY STRUCTURE_SUMMARY em_admin entity _em_admin.last_update _entity.formula_weight STRUCTURE_SUMMARY chem_comp_atom chem_comp_bond em_admin pdbx_entry_details pdbx_modification_feature pdbx_validate_close_contact struct_conn _em_admin.last_update _pdbx_entry_details.has_protein_modification REMEDIATION REPOSITORY Metalloprotein remediation STRUCTURE_SUMMARY chem_comp chem_comp_atom chem_comp_bond em_admin entity pdbx_modification_feature pdbx_nonpoly_atom_coordination pdbx_nonpoly_atom_coordination_sphere pdbx_nonpoly_atom_coordination_sphere_order pdbx_validate_chiral pdbx_validate_close_contact struct_conn _chem_comp.formula _chem_comp.formula_weight _em_admin.last_update _entity.formula_weight RCSB RCSB 2022-08-23 2023-01-11 2023-01-11 2026-08-12 Department of Energy (DOE, United States) DE-SC0022293 United States Vigna radiata supercomplex I+III2 (full bridge) Maldonado M Letts JA respiratory supercomplex, nadh-cyt c oxidoreductase, membrane complex, ELECTRON TRANSPORT Maldonado M Fan Z Abe KM Letts JA Plant-specific features of respiratory supercomplex I + III 2 from Vigna radiata. Nat.Plants UK 9 157 168 2023 36581760 doi:10.1038/s41477-022-01306-8 2055-0278 EMD-29088 other EM volume

focused refinement around bridge

EMD-29089 other EM volume

focused refinement around complex I heel

EMD-29090 other EM volume

focused refinement around complex I-Pd domain

EMD-29091 other EM volume

focused refinement around complex III2 dimer

EMD-29092 other EM volume

focused refinement around complex I N module

EMD-29093 other EM volume

focused refinement around complex III2 proximal MPP domain

EMD-29094 other EM volume

focused refinement around complex III2 distal MPP domain

EMD-29095 other EM volume

V. radiata respiratory supercomplex I+III2 bridged class 2

EMD-28798 other EM volume

V. radiata SC I+III2 bridge-less class 1

8e73 FULLOVERLAP EMDB EMD-27934 associated EM volume

Vigna radiata supercomplex I+III2 (full bridge)

EMDB EMD-29088 other EM volume

focused refinement around bridge

EMDB EMD-29089 other EM volume

focused refinement around complex I heel

EMDB EMD-29090 other EM volume

focused refinement around complex I-Pd domain

EMDB EMD-29091 other EM volume

focused refinement around complex III2 dimer

EMDB EMD-29092 other EM volume

focused refinement around complex I N module

EMDB EMD-29093 other EM volume

focused refinement around complex III2 proximal MPP domain

EMDB EMD-29094 other EM volume

focused refinement around complex III2 distal MPP domain

EMDB EMD-29095 other EM volume

V. radiata respiratory supercomplex I+III2 bridged class 2

EMDB EMD-28798 other EM volume

V. radiata SC I+III2 bridge-less class 1

Vigna radiata supercomplex I+III2 (full bridge) Vigna radiata supercomplex I+III2 (full bridge) 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59

Higher-order assembly between respiratory complex I and complex III2

Vigna radiata MPP-beta Vigna radiata 0.05871123799999999 2 LEVO MSLNRLLSAARRSDRRASALSSFRSLSASPALAPSAASPPAPPPPTAMIYDRAAEAIKSKLRQLENPDPRFLKHGNPRPA LSDHTRILAAPETRVTTLPNGLRVATESSLAARTATVGVWIDAGSRFETEETNGTAHFLEHMIFKGTERRNARELEEEIE NMGGHLNAYTSREQTTYYAKVTDSDVPQALDILADILQNSRFEENRISRERDVILREMEEVEGQTEEVIFDHLHATAFQY TPLGRTILGPAQNIKTITKAHLQSYIQTHYTAPRMVIAASGAVKHEDIVEQVKKLFTKLSTDATTTAQLVAKEPAIFTGS EVRMLDDDIPLAQFAVAFEGASWKDPDSIALMVMQAMLGSWNKTAGGGKHMGSELAQRVGINEVAESIMAFNTNYKDTGL FGVYAVAKPDCLDDLSYAIMQETTKLVYRVSEDDVTRACNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARI DAVDASTIKRVANRFIYDKDVAIAAMGPIQRLPDYNWFRRRTYWNRY A0A1S3TWG4 MPP-alpha (protomer 1) Vigna radiata 0.05524454299999999 1 LEVO MYRNVASRLRTIRARSCSRLPVRFASSSSSSVATKQSSSGLGGLFGWLTGDRSSSATPLDFPLPGVILSPPLPDYVAPGK TIITTLPNGVKVASETSATPTASIGLYVDCGSIYESPISFGATHLLERMAFKTTRNRSHFRVVREVEAIGGNVQASASRE QMGYTFDALKTYVPEMVELLVDCVRNPAFLDWEVNEQLLKVKAEIGEASKNPQDLLLEAIHSAGFSGALANPLLASESAI NRLNGAILEEFVAENYTAPRIVLAASGVEHEELLSVAEPLLSDLPSVPRPEEPKSVYTGGDYRCQSETGRTHFALAFELP GGWHKLKDAMVLTVLQMLLGGGGSFSAGGPGKGMYSRLYLNVLNQYPQFHSISAFNNIYNDTGIFGIQVTTSSDFISKAI DITANEILAVATHGKVEQLQLDRAKQATKSAILMNLESRMVVSEDIGRQILTYGERKPVEEFLKAVDEVTLKDISSISQK LISSPLTMASYGDVLYVPSYESVSSKFPTK A0A1S3UHF9 COB (cyt b) Vigna radiata 0.044454644999999994 2 LEVO MTIRNQRFSLLKEPISSTLNQHLIDYPTPSNLSYWWGFGSLAGICLVIQIVTGVFLAMHYTPHVDLAFNSVEHVMRDVEG GWLLRYMHANGASMFFIVVYLHIFRGLYYASYSSPREFVWCLGVVIFLLMIVTAFTGYVLPWGQMSFWGATVITSLASAI PVVGDTIVTWLWGGFSVDNATLNRFFSLHYLLPFLLVGASLLHLAALHQYGSNNPLGVHSEMDQISFYPYFYVKDLVGWV AFAIFFSIWIFYAPNVLGHPDNYIPANPMSTPPHIVPEWYFLPIYAILRSIPDKSGGVAAIALVFICLLALPFFKSMYVR SSSFRPIYQGIFWLLLADCLLLGWIGCQPVEAPFVTIGQISSFVFFLFFAITPILGRVGRGIPNSYTTDETEMT CYC1 (cyt c1) Vigna radiata 0.033556188 2 LEVO MTGGVFQLLRRKLHPQFTNSSLLSPIIAKKDGAGSTGSRSLKVLALIGAGVSGFFSFSTVAVADEAEHGLACPSYPWPHK GILSSYDHASIRRGHQVYTEVCASCHSMSLISYRDLVGVAYTEEEVKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPY ANEAAARFANGGAYPPDLSLITKARHNGQNYVFSLLTGYRDPPAGVSIREGLHYNPYFPGGAIAMPKMLNDGAVEYEDGT PATEAQMGKDVVSFLSWAAEPEMEERKLMGFKWIFVLSLALLQAAYYRRLRWSVLKSRKLVLDVVN A0A1S3W199 UCR1 (Rieske iron-sulfur protein subunit) Vigna radiata 0.030051432 2 LEVO MLRVAAKRLSSLSSSAWRANHAASAVLSRNPVAPSLSTEEHRSDPFSLRPEFFLPIRGYATDSLFHPKENSLIPEIPATV AAVKNPSSKIIYDEHNHERFPPGDPSKRAFAYFVLTGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGT TVTVKWRGKPVFIRRRTEDDIKLANSVDVASLRDPQQDAERVKNPEWLIVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHY DISGRIRKGPAPYNLEVPTYTFLEENKLMIG A0A1S3TB49 7.1.1.8 QCR7 Vigna radiata 0.014392697999999999 2 LEVO MASFLQSFLDPKKNWLAAQHMKSLVKRLSKYGLRYDDLYDPYYDLDVKEALNRLPKEVVDARHARLKRAIDLSMKHEYLP EDLQAMQTPFRGYLQDMLALVKRERAEREALGGLPLYQRSIP A0A1S3U9J1 QCR8 Vigna radiata 0.008349831 2 LEVO MGKQIVPVKSVIYALSPFQQKVMTGLWKDLPTKIHHKVSENWISATLLLGPLVGTYAYVQNYLEKEKLHHRY A0A1S3U9S5 QCR6 Vigna radiata 0.008117424 2 LEVO MADEEPVDQKRYLEESCKPKCVKPLLEYQACIKRIHGDDSGQKHCTGQYFDYWFCVDKCVAPKLFTKLK A0A1S3VHC0 QCR9 Vigna radiata 0.00820342 2 LEVO METVARRRGGGIFESLYKVVMRRNSVYVTFVIAGAFLGERAVDYGIHKLWEANNVGKRYEDIPVLGQKLSEE A0A1S3TQD2 QCR10 (UCRY) Vigna radiata 0.008948875 2 LEVO MAGLPARLRIQPADVKAAAMWGVAAATGGLYLVQVSILVLPPVKVVFHFYLVSGFRICLDVKDLRTMPCSAPRIWRLYIL I MPP-alpha (protomer 2) Vigna radiata 0.054537683999999996 1 LEVO MYRAAASSFRRHLKGHGSKLGSTRSSTSAAVAARTSKGGLFSWLTGERSSSLPSLDIPLGGVVLPDPLPDSVEQSKTKIT TLSNGLKIASETSPNPAASIGLYLDCGSIYETPFSSGASHLLERMAFKSTTNRSHFRIVREVEAIGGNIGASASREQMGY TFDALKTYVPQMVELLVDCVRNPAFLDWEVNEELRKVKAELGELSNNPQGLLLEAIHSAGYSGALAYPLLAPEAALNRLD GPSLEEFVAENYTAPRMVLAAAGVEHEELVSIAEPLLSDLPNVPRPDEPKSVYVGGDFRRHGESGGTHVALAFEVPGGWH KEKDAIVLTVLQMLMGGGGSFSAGGPGKGMHSRLYLRVLNEYQQIQSFSAFNSIFNNTGLFGIYASTSPDFAPKAVDIAA KELIAIASPGQVTQVQLDRAKKSTKSAVLMNLESRMIASEDIGRQILTYGERKPLEQFLKAVDEITLNDITKISQKIISS PLTMASYGDVLSVPSYESVNRKFHAK A0A1S3VF71 Nad1 Vigna radiata 0.035771562 1 LEVO MYIAVPAEILGIILPLLLGVAFLVLAERKVMAFVQRRKGPDVVGSFGLLQPLADGLKLILKEPISPSSANFFLFRMAPVA TFMLSLVAWAVVPFDYGMVLSDSNIGLLYLFAISSLGVYGIITAGWSSNSKYAFLGALRSAAQMVSYEVSIGLILITVLI CVGSCNLSEIVMAQKQIWFGIPLFPVLVMFFISCLAETNRAPFDLPEAEAESVAGYNVEYSSMGFALFFLGEYANMILMS GLCTSLSLGGWLPILDLPIFKRIPGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGWKVFLPLSLAWVVAVSGVSVT FPWLP Nad2 Vigna radiata 0.054063019999999996 1 LEVO MFNLFLAVYPEIFIINATFILLIHGVVFSTSKKYDYPPLVSNVGWLGLLSVLITLLLLAAGAPLLTIAHLFRNNFFRRDN FTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVMAASKRKSEF STEAGLKYLILGAFSSGILLFGCSMIYGSTGATHFDQLAKILTGYELAGARSSGIFMGILFIAVGSLFKITAVPFHMWAP DIYEGSPTPVTAFLSIAPKISIFANILRVFIYGSYGATLQQIFCFCSIASMILGALAAMAQTKVKRLLAYSSIGHVGYIC IGFSCGTIEGIQSLLIGIFIYALMTIDAFAIVLALRQTRVKYIADLGALAKTNPILAITFSITMFSYVGIPPLAGFCSKF YLFFAALGCGAYFLASVGVVTSVIGCFYYIRLVKRMFFDTPRTWILYEPMDRDKSLLLAMTSSFITLFFLYPSPLFSVTH QMALSLYL Nad3 Vigna radiata 0.013746171 1 LEVO MLEFAPICIYLVISLLVSLILLGLPFLFASNSSTYPEKLSAYECGFDPFGDARSRFDIRFYLVSILFIIFDLEVTFFFPW AVSLNKIDLFGFWSMMAFLLILTIGFLYEWKRGALDWE G9JLR0 Nad4 Vigna radiata 0.055823391 1 LEVO MLEHFCECYFDLSGLILCPVLGSIILIFIPNSRIRLIRLIGLCASLITFLYSLVLWIQFDPSTAKFQFVESLRWLPYENI NLNLGIDGLSFFFVILTTFLIPICILVGWSGMRSYGKEYIIAFLICEFLMIAVFCMLDLLLFYVFFESVLIPMFIIIGVW GSRQRKIKAAYQFFLYTLLGSVFMLLAILLILFQTGTADLQISLTTEFSERRQIFLWIAFFAAFAVKVPMVPVHIWLPEA HVEAPTAGSVILAGILSKLGTYGFLRFSIPMFPEATLCFTPFIYTLSAIAIIYTSLTTLRQIDLKKIIAYSSVAHMNLVT IGMFSLNIQGIGGSILLMLSHGLVLSALFLCVGVLYDRHKTRLVRYYGGLVSTMPNFSTIFFFFTLANMSLPGTSSFIGE FLISVGAFQRNSLVATLAALGMILGAAYSLWLYNRVVSGNLKADFLHKFSDLNGREVFIFIPFLVGVVRMGVHPKVFLDR MHTYVSNLVQHGKFN Nad4L Vigna radiata 0.011153495000000001 1 LEVO MDLIKYFTFSMIIFILGIWGILLNRRNILIMLMSIELMLLAVNSNFLVFSVSLDDMMGQLFALLVLTVAAAESAIGLAIF VITFRVRGTIAVEFINSIQG Nad5 Vigna radiata 0.074895273 1 LEVO MYLLIVFLPLIGSSFAGFFGRFLGSEGSAIMTTTCVSFSSILSLIAFYEVALGASACYLRIAPWISSEMFDASWGFLFDS LTVVMLIVVTFISSLVHLYSISYMSEDPHSPRFMCYLSILTFFMLMLVTGDNFLQLFLGWEGVGLASYLLIHFWFTRLQA DKAATKAMLVNRVGDFGLALGILGCFTLFQTVDFSTIFACASAPRNSWIRCNMRLNAITLICILLFIGAVGKSAQIGSHT WLPDAMEGPTPVSALIHAATMVTAGVFMIARCSPLFEYSPTALIVITFAGAMTSFLAATTGILQNDLKRVIAYSTCSQLG YMIFACGISNYSVSVFHLMNHAFFKALLFLSAGSVIHAMSDEQDMRKMGGLASSFPFTYAMMLMGSLSLIGFPFLTGFYS KDVILELAYTKYTISGNFAFWLGSVSVLFTSYYSFRSLFLTFLVPTNSFGRDILRCHDAPIPMAIPLILLALGSLFVGYL AKDMMIGLGTNFWANSLFVLPKNEILAESEFAAPTITKLIPILFSTSGASVAYNVNLVADQFQRAFQTSTFCNRLYSFFN KRWFFDQVLNDFLVRSFLRFGYEVSFEALDKGAIEILGPYGISYTFRRLAERISQLQSGFVYHYAFAMLLGLTLFVTFFC MWDSLSSWVDNRSSFILIVSSFFNNKSIIINKN Nad6 Vigna radiata 0.023604368999999997 1 LEVO MILSVLFSLALVSGLMVVRAKNPVHSVLFFILVFCDTSGLLLLLGLDFFAMIFLVVYIGAIAVLFLFVVMMFHIQIAEIH EEVLRYLPVSGIIGLILWWEMFFILDNETIPLLPTQINTTSLIYTVYAGKVRSWTNLETLGNLLYTYYFVWFLVPSLILL VAMIGAIVLTMHRTTKVKRQDVFRRNAIDFRRTIMRRTTDPLTID NDUA1 Vigna radiata 0.007357572 1 LEVO MNLRWMEAVLPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDLWDVAMERRDKKLHEQAASSSN A0A1S3TU57 NDUA2 Vigna radiata 0.010884631999999998 1 LEVO MAWRGQLSKNIKELRFLMCQSSSASASARAFVEKNYKELKTLNPKLPILIRECSGVEPQLWARYDLGVEKAIKLEGLSEA QISKALEDLAKAGQSSKA A0A1S3TVC7 NDUA3 Vigna radiata 0.006695044 1 LEVO MAVMEKLKMFVVQEPVVAASCLIAGFGLFLPAVVRPILDSYQATKQPPQPALSDVVAGMTGKK A0A1S3TCK0 NDUA5 Vigna radiata 0.018977604 1 LEVO MFLRAVARPLMAKVKASTGIVGLEVVPNAREVLIGLYSKTLKEIQKVPEDEGYRKAVESFTKHRLSVCKEEEDWEAIEKR LGCGQVEELIEEAQDELKLISYMIEWDPWGVPDDYECEVIENDAPVPKHVPLHRPPPLPTEFHKTLEALSSQSGKDIPGA SSTESPSKT A0A1S3U023 NDUA6 Vigna radiata 0.014920033999999999 1 LEVO MASALRNVKVLPNSASVEEARQRVFDFFRATCRSLPSVMEIYNLYDVTSVAQLRSTVASEIRKNIGVSDPKVIDMLLFKG MEELMNVVNHSKQRHHIIGQYVVGQQGQVQDSASKDPAISPFLKNFYSSNYF A0A1S3W1K8 NDUA7 Vigna radiata 0.014356375999999999 1 LEVO MAKSASNSLVQTLKRYIKKPWEITGPCADPEYRSAVPLATEYRLQCPATTKEKPCIPNSLPETVYDIKYFSRDQRRNRPP IRRTVLKKADVEKLAKEQTFAVSDFPPVYLNSAVEEDINAIGGGYQG A0A1S3UVC7 NDUA8 Vigna radiata 0.012022893 1 LEVO MASAVDASGNPIPSSSVLMASSKHIGIRCHSENLDFLKCKKKDPNPEKCLDKGRDVTRCVLGLLKDLHQKCTKEMDDYVG CMYYHTNEFDLCRKEQQAFEKKCSLE A0A1S3VVN6 NDUA9 Vigna radiata 0.043781504 1 LEVO MQTIARRLGHQSLKSSTSIRAIYPISDHHYVADHQRYVSTIATKGVGHLVRKGTGGRSSVSGIIATVFGATGFLGRYVVQ QLAKMGSQVLVPFRGSEDCPRHLKLMGDLGQIVPMKYNPRDESSVKAVMAKANVVINLIGRDYETRNYSFEEVHYHMAEN LAKISREHGGILRFIQVSCLGASPSSPSRMLRAKAAAEEVVLRELPEATILKPAVMIGTEDRILNPWAHFAKKYGFIPLF GNGSTKIQPVYVVDVAAALTTVLKDDGTSMGKTYELGGPEIFTVHDLAELMYETIREWPRYVKVPFPIAKALATPREILL NKVPFPLPTPEILNLDKIQALTTDTIVSENALTFNDLGIIPHKLKGYPVEFLISYRKGGPQFGSTISERVTPDAWP A0A1S3V8W7 NDUA11 Vigna radiata 0.017284715 1 LEVO MVDAAERRYLEDEDTPFMKTIKGATTGLVAGTIWGTVVATWYDVPRVERSVALPGLIRTFKMMGNYGLTFAAIGGVYIGV EQLLQNYRMKRDLVNGAVGGFVAGATILGYKGRSIKTALSAGSALAFTSAYIDFGGQTLKHDEGKEYAAYTTKKRTSGDE A0A1S3TLY8 NDUA12 Vigna radiata 0.018192482 1 LEVO MASVVKNVLKSIREKGFGTFLRELKDEGYLRCLPDGNLLQTKIHNIGATLVGVDKFGNKYYEKLGDTQYGRHRWVEYAEK SRYNASQVPPEWHGWLHFITDHTGDELLLLKPKRYGVEHKENLSGEGEQYIYHSKGHALNPGQRDWTRYQPWESKA A0A1S3VNK7 NDUA13 Vigna radiata 0.0161896 1 LEVO MTEAYIRNKPGMVSVKDMPVLQDGPPPGGFAPVRFARRIPNKGPSAVAIFLAAFGTFSWGMYQVGQGNKIRRALKEEKYA ARRSILPVLQAEEDERFVREWHKYLAYEAEVMKDVPGWKVGESVYNSGRWVPPASGELRPDIW A0A1S3UYW0 NDUAB1-beta Vigna radiata 0.013066031999999998 1 LEVO MAVRAAVLRHIRVPLQAVPRLQPWRAMSSHGDDHLSKEEVIQRVLAVVKDFPKVDPSKVTPDVHFQKDLGLDSLDNVEIV MALEEEFKLEIPDKEADKIDSCNLAIEYIANHPMAG A0A0L9U2J6 NDUAB1-alpha Vigna radiata 0.014314355999999999 1 LEVO MAASRSTLPLIKYLRVRVDALPRNSPLTLAPTVFLRRFCEEVRGSFLDKSEVADRVISCVKNFQKVDPAKVTPNAHFQND LGLDSLDAVEIVMALEEEFGFEIPDNEADKINSIKHAVDFIASHPQAK A0A1S3VXS7 NDUB2 Vigna radiata 0.007555608 1 LEVO MGGHGEGTTYKGVTIHQPKRWHTITGKGLCAVMWFWVLYRAKQDGPVVLGWRHPWEGHHDDHGKGH A0A1S3TFG6 NDUB3 Vigna radiata 0.007843885 1 LEVO MGSGKHTAEFFRRRDAWRKHPMLTNQFRHATPGLGIALVAFGFYLVGEQVYDRLNADSHVHVKAENHH A0A1S3UVV0 NDUB4 Vigna radiata 0.008364627 1 LEVO MGGGMEANKNKFIEDWGTARENLEFNFRWTRRNLALVGIFGIAIPVLVYKGIVREFHMQDEDNGRPYRKFM A0A1S3ULL3 NDUB7 Vigna radiata 0.011600553999999999 1 LEVO MEVEGSSKKMIATQEEMVEARVPLAYRDQCAHLLIPLNKCRQAEFYLPWKCENERHSYEKCEYELVMERMLQMQKIREEQ KKADAKQPLILVPKPANA A0A1S3V2B8 NDUB8 Vigna radiata 0.013592655 1 LEVO MAGRLTNAASRILGGNGVVYRSVASSLRLRSGMGLPVGKHYIPDKPLPMNEELLWDNGTPFPEPCIDRIADTVGKYEALA WLCGGLSFFASLGLLAVWNDKASKIPFTPKVYPYDNLRVELGGEP A0A1S3UJ95 NDUB9 Vigna radiata 0.013519021 1 LEVO MASTAAYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYNDAENLRDRFEENKHVEDPDTIDRLIADAEASYNKWRHPD PYIVPWAPGGSKFTRNPAPPQGIEIVYDYGREDNN A0A1S3U1J6 NDUB10 Vigna radiata 0.012587425999999999 1 LEVO MGRKKGYVEFDESPPDDFDPANPYKDPVAMLEMREYIVREKWIQIEKAKIIREKLRWCYRIEGVNHLQKCRHLVNQYLES TRGIGWGKDGRHPSLHAPKVEPVESE A0A1S3VGT1 NDUB11 Vigna radiata 0.013157822999999999 1 LEVO MPPATPFATASATIRRRVLQSLRTRGGAESGPSRWTSPGHEERPKGYLFNRTPPPPGQSRKWEDWELPCYITSFLTIVIL GVGLNAKPDLTIETWAHEKALERLKIENALASNNDSSE A0A1S3V2Z3 NDUFX Vigna radiata 0.017610127 1 LEVO MAVANLQRLSSQVQRLPSLSFFSKSLISRSTATSSSSKKVSDRIVRLSAIDFEGKKHEVVGLAGHTLLKALINTGLIDPD SHRLEEIDACSAHCEVNIAQEWLDKLPPRSYDEEYVLVRNSRARVLNKHSRLGCQVLLDHNLQGMVVALPEPKPWDTS A0A1S3VXN7 NDUC2 Vigna radiata 0.009243669 1 LEVO MVLSATTIGALLGLGTQMYSNALRKLPYMRHPWEHVVGMGLGAVFVNQLLKWEAQVEQDLDKMLEKAKAANERRYIDGDD DI NDUP2 Vigna radiata 0.012172665999999999 1 LEVO MAARVAARYGSRRLFSSGSGKILSEEEKAAENAYFKKAEQDKLEKLARKGPQPEASSGGSVIDAKPSGSGHTGASAERVS TDKHRNYAVVAGTITILGALGWYLKGTAKKPEVQD A0A0L9V7A4 NDUCA1 Vigna radiata 0.029333197 1 LEVO MGTLGRAFYAVGFWIRETGQAIDRLGSRLQGNYLFQEQLSRHRPLMNLFDKYPSVHKDAFVAPSASLLGDVHVGPASSIW YGCVLRGDVNGIVIGSGTNIQDNSLVHVAKSNLTGKVLPTIIGDNVTVGHSAVLQGCTVEDEAFIGMGATLLDGVYVEKH AMVAAGALVRQNTRIPYGEVWGGNPAKFLRKLTEDEMAFFSQSALNYSNLAQAHAAENAKELEETEFVKVLHKKFAPRGE EYDSILDGGQETPAKLNLQDNVLLDKAPKA A0A1S3VT00 NDUCA2 Vigna radiata 0.029780861 1 LEVO MGTLGRAIYSVGFWIRETGQAIDRLGSRLQGGYFFQEQLSRHRTLMNIFDKAPVVDKDVFVAPSASVIGDVQVGRGSSIW YGCVLRGDVNSIRVGSGTNIQDNSLVHVAKSNLSGKVLPTVIGDNVTVGHSAVLHGCTVEDEAFVGMGAVLLDGVVVEKN AMVAAGALVRQNTRIPSGEVWAGNPAKFLRKLSNEEITFISQSAINYTNLAQVHAAENSKSYDEIEFEKVLRKKYARKDE EYDSMLGVVREIPPELILPDNVLPDKAEKALQK A0A1S3U544 NDUCAL2 Vigna radiata 0.028268359 1 LEVO MANLARFSKRALRSAHSLVRHAQSQVQPQLFAEERAFSTEAAKSITPSPDRVKWDYRGQRKIIPLGQWLPKVAVDAYVAP NVVLAGQVTVWDGASVWPGCVLRGDLNKISIGFCSNVQERSVLHAAWTSPTGLPADTSIERYVTIGAYSLLRSCTIEPEC IIGQHSILMEGSLVETQSILEAGSVVPPGRRIPSGELWAGNPARFVRTLTHEEILEIPKLAVAINDLSRDHYSEFLPYST VYLEVEKFKKSLGISV A0A1S3UI49 NDUS1 Vigna radiata 0.08143421899999999 1 LEVO MGFGLLASKALRPTSRLLLSSQNPTIFLRTIVSKPQLCNPEASAAQPAQPPPVDLPPRSPLAGARVHFANPDDAIEVFVD GYPVKIPKGMTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLVEVEKSPKPVASCAMPALPGMKIKTDTPVAKKAREGVM EFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEVKRSVVDKNLGPLVKTVMTRCIQCTRCVRFATEVAGVQDLGM LGRGSGEEIGTYVEKLLTSELSGNVIDICPVGALTSKPFAFKARNWELKGTETIDVTDAVGSNIRIDSRGPEVMRIVPRL NEDINEEWISDKTRFCYDGLKRQRLNDPMIRGPDGRFKAVNWRDALSVIADIAHQVKPEEIVGVAGKLSDAESMIALKDF LNRMGSNDVWGEGIGVNTNADFRSGYIMNTSIAGLEKADVFLLVGTQPRVEAAMVNARIRKTVRSNQAKVGYIGPATDFN YDHKHLGTDPQTLVEIAEGRHPFFKTLSDAKNPVIIVGAGVFERKDQDAIFAAVETIAQKANVVRPDWNGLNVLLLHAAQ AAALDLGLVPQSEKSLESAKFVYLMGADDVNLDKIPDDAFVVYQGHHGDKSVYRANVILPTAAFSEKEGTYQNTEGCTQQ TLPAVPTVGDSRDDWKIIRALSEVAGVRLPYDTIGAVRARIRNVAPNLVNVDEREPATLPSSLRPSFTQKVDTTPFGTVI ENFYMTDAITRASKIMAQCSATLLKK A0A1S3TQ85 NDUS2 Vigna radiata 0.045031637 1 LEVO MTTRNGQIKNFTLNFGPQHPANFGSLRLVLEMNGEVVERAEPHIGLLHRGTEKLIEYKTYLQALPYFDRLDYVSTMAQEH AYSLAVERLLNCEVPLRAQYIRVLFCEITRILNHLLALTTHAMDVGASTPFLWAFEEREKLLEFYERVSGARMHASFIRP GGVAQDLPLGLCRDIDSFTQQFASRIDELEEMLTGNRIWKQRLVDIGTVTAQQAKDWGFSGVMLRGPGVCWDLRRAAPYD VYDQLDFDVPVGTRGDCYDRYCIRIEEMRQSMRIIWQCLNKIPSGMIKADDRKLCPPSRCRMKLSMESSIHHFELYTEGF SVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR NDUS3 Vigna radiata 0.022926971 1 LEVO MDNQFIFKYSWETLPKKWVKKMERSEHGNRFDTKTDYLFQLLCFLKLHTYTRVQVLIDICGVDYPSRKRRFEVVYNLLST RYNSRIRVQTSADEVTRISSVVSLFPSAGWWEREVWDMFGVSFINHPDLRRILTDYGFEGHPLRKDFPLSGYVEVRYDDP EKRVVSEPIEMTQEFRYFDFASPWEQRSDG NDUS4 Vigna radiata 0.016435736 1 LEVO MANTLQRALRATMARRFSTQALVETKPGEIGMVSGIPQEHLRRRVVIYSPARTASQQGSGKVGRWKINFLSTQKWENPLM GWTSTGDPYAHVGDSALTFDSAEAAKAFAEKHGWEYSVKKRHTPLLKVKSYADNFKWKGFPKPAEE A0A1S3UIW7 NDUS5 Vigna radiata 0.009966398 1 LEVO MASGWGITGNKGRCYDFWMDFSECMSRCREPKDCGLLREDYLECLHHSKEFQRRNRIYKEEQRKIRAAAKKAKDDGVVKE HHY A0A1S3TQ33 NDUS6 Vigna radiata 0.011582296 1 LEVO MASSVLRNLMRFSSPRNTSTRSFSLVTSQISNHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDTNPALGHPIEFI CLDLPEPAVCKYCGLRYVQDHHH A0A1S3VYF3 NDUS7 Vigna radiata 0.023710473 1 LEVO MALLSRASSRIYQVHSYQRALSLHTTLPALNASTSTHTPTPYAPPPPPSASSPVGVSKAAEFVISKVDDLMNWARRGSIW PMTFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYY HYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGLLQLQKKINRRKDFLHWWTK A0A1S3U8J5 NDUS8 Vigna radiata 0.025545009999999996 1 LEVO MAAILARKSLLALRARQLAVSGQGLHSSQSYGLRLSAHSFSTKLEDEQREQLAKEISKDWSSVFERSINTLFLTEMVRGL MLTLKYFFETKVTINYPFEKGPLSPRFRGEHALRRYPTGEERCIACKLCEAICPAQAITIEAEEREDGSRRTTRYDIDMT KCIYCGFCQEACPVDAIVEGPNFEFATETHEELLYDKEKLLENGDRWETEIAENLRSESLYR A0A0L9VFH0 NDUP1 Vigna radiata 0.011245802999999999 1 LEVO MGFIMEFAENLVLKLMEDPKERDRRFREHVYRVKDRCEKTKEMWSYPMRPYGFWTFERHNSQLAWDAQISQVPGRRDPYD DLLQHYSTPPK A0A1S3U2B9 NDUP4 Vigna radiata 0.0073164449999999995 1 LEVO MVRVASYFAMTLGAFVFWQSMDKVHVWIALHQDEKQERLEKEAEIRRVREELLKQQANQKG A0A1S3UND4 NDUB6 Vigna radiata 0.009708139 1 LEVO MGGGGGDHGHGNGDFRTKVWSMTGGPYCRPKHWKRNTAIAMFGVVLVCIPIAMKSAELEQRPHHPVRPIPSQLWCKNFGT KDYEQSE A0A1S3TTD7 NDUV1 Vigna radiata 0.05390466 1 LEVO MRGILSLRSALVQHRSEKLGLGLRQFSTQGASTPTSPQPPPPPASPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGLHDPF LKGAMKRGDWYRTKDLVIKGTDWIVNEMKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMR HDPHKLLEGCLIAGVGMRATAAYIYIRGEYVNERKNLEKARQEAYAAGLLGKNACGSGYDFDVHIHFGAGAYICGEETAL LESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFAGFGRKNNAGTKLFCVSGHVNKPCTVEEEM SIPLKELIERHCGGVRGGWDNLLAVIPGGSSVPLLPKSICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSY FYKHESCGQCTPCREGTGWLWTIMERMKVGNAKLEEIDMLQELTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIRE NAERELLQATGS NDUV2 Vigna radiata 0.027992949 1 LEVO MLARLAANRFNEIRHIFRQPSRAFSTALNYHLDSPDNNPNLPWEFTEPNKAKVTEILSHYPSNYKQSAVIPLLDLAQQQH GGWLPVSAMNAVANIIEVPPIRVYEVATFYSMFNRAKVGKYHLLVCGTTPCMIRGSRGIEEALLKHLGVKRNEVTPDGLF SVGEMECMGCCVNAPMITVADYSNGSEGYTYNYYEDVTPEKVVEIVEKLRKGEKPPHGTQNPLRIRSGPEGGNTTLLGEP KPPPCRDLDAC A0A0L9UNZ4 NDUX1 Vigna radiata 0.01094954 1 LEVO MNTDITASTKPEYPVVDRNPPFTKVVGNFSTLDYLRFVTITGVSVTVGYLSGIKPGIRGPSMVTGGLIGVMGGFMYAYQN SAGRLMGFFPNDDEVARHNKK A0A1S3VI15 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE 0.0007901449999999999 8 PC1 CARDIOLIPIN 0.0014640429999999997 8 CDL PROTOPORPHYRIN IX CONTAINING FE 0.000616487 4 HEM 1,2-Distearoyl-sn-glycerophosphoethanolamine 0.000748065 8 3PE HEME C 0.0006205189999999999 2 HEC UBIQUINONE-10 0.0008633429999999999 1 U10 NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE 0.000745421 1 NDP S-[2-({N-[(2S)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl] tetradecanethioate 0.000568704 2 ZMP FE (III) ION 5.5845e-05 1 FE ZINC ION 6.5409e-05 2 ZN IRON/SULFUR CLUSTER 0.00035163999999999996 6 SF4 FE2/S2 (INORGANIC) CLUSTER 0.00017581999999999998 2 FES FLAVIN MONONUCLEOTIDE 0.00045634399999999997 1 FMN singleParticle particle 1.55 7.7

0.2% digitonin, 30 mM HEPES pH 7.7, 150 mM potassium acetate, 1 mM EDTA, 0.002% PMSF

Quantifoil R1.2/1.3 COPPER GLOW DISCHARGE 60 AIR ETHANE 90 LEICA EM GP

4 ul, 20 seconds pre-blot, blot 4 seconds.

Digitonin-extracted, amphipol (A8-35)stabilized

TFS GLACIOS OTHER OTHER FIELD EMISSION GUN 200 0.5 2.5 NITROGEN GATAN K3 (6k x 4k) 2 25712 3.0 60.0 1 CTFFIND NONE 1 C1 3.2 FSC 0.143 CUT-OFF cryoSPARC 123451 NOT APPLICABLE NOT APPLICABLE emd_27934.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 376 269 226 133 180 179 226 269 376 198.88 236.72 330.88 90.0 90.0 90.0 Z Y X -25.093775000000001 59.066498000000003 0.28915003 2.8661964 0.88 0.88 0.88 6.5 AUTHOR ::::EMDATABANK.org::::EMD-27934:::: Vigna radiata supercomplex I III2 (SC I III2) composite map of full supercomplex (bridged class 1). RIGID BODY FIT REAL emd_27934_msk_1.map emd_27934_additional_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 600 600 600 0 0 0 600 600 600 528.0 528.0 528.0 90.0 90.0 90.0 X Y Z -0.5215546 1.6819024 0.00024973418 0.02790356 0.88 0.88 0.88 AUTHOR ::::EMDATABANK.org::::EMD-27934:::: Vigna radiata supercomplex I III2 bridged class 1 emd_27934_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 600 600 600 0 0 0 600 600 600 528.0 528.0 528.0 90.0 90.0 90.0 X Y Z -0.629622 1.1038302 0.0007515371 0.07452021 0.88 0.88 0.88 AUTHOR ::::EMDATABANK.org::::EMD-27934:::: Vigna radiata supercomplex I III2 bridged class 1_half map A emd_27934_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 600 600 600 0 0 0 600 600 600 528.0 528.0 528.0 90.0 90.0 90.0 X Y Z -0.6572409 1.0959245 0.0007441748 0.07466258 0.88 0.88 0.88 AUTHOR ::::EMDATABANK.org::::EMD-27934:::: Vigna radiata supercomplex I III2 bridged class 1_half map B