REL PDBe PDBe PDBe 2014-09-21 2014-10-29 2015-02-04 2015-03-04 Plaschka C Lariviere L Wenzeck L Hemann M Tegunov D Petrotchenko EV Borchers CH Baumeister W Herzog F Villa E Cramer P transcription, transcription initiation, RNA polymerase II, General Transcription Factors Plaschka C Lariviere L Wenzeck L Hemann M Tegunov D Petrotchenko EV Borchers CH Baumeister W Herzog F Villa E Cramer P NATURE 518 376 380 2015 25652824 doi:10.1038/nature14229 4v1n FULLOVERLAP cITC cITC 19 0.75 DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1 Saccharomyces cerevisiae BJ5464 Rpb3 His-Bio Baker's yeast Nucleus 0.192 0.192 1 false P04050 DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2 Saccharomyces cerevisiae BJ5464 Rpb3 His-Bio Baker's yeast Nucleus 0.139 0.139 1 false P08518 DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB3 Saccharomyces cerevisiae BJ5464 Rpb3 His-Bio Baker's yeast Nucleus 0.035 0.035 1 false P16370 DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 Saccharomyces cerevisiae BJ5464 Rpb3 His-Bio Baker's yeast Nucleus 0.025 0.025 1 false P20433 DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC 1 Saccharomyces cerevisiae BJ5464 Rpb3 His-Bio Baker's yeast Nucleus 0.025 0.025 1 false P20434 DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC 2 Saccharomyces cerevisiae BJ5464 Rpb3 His-Bio Baker's yeast Nucleus 0.018 0.018 1 false P20435 DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB7 Saccharomyces cerevisiae BJ5464 Rpb3 His-Bio Baker's yeast Nucleus 0.019 0.019 1 false P34087 DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC 3 Saccharomyces cerevisiae BJ5464 Rpb3 His-Bio Baker's yeast Nucleus 0.017 0.017 1 false P20436 DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB9 Saccharomyces cerevisiae BJ5464 Rpb3 His-Bio Baker's yeast Nucleus 0.014 0.014 1 false P27999 DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC 5 Saccharomyces cerevisiae BJ5464 Rpb3 His-Bio Baker's yeast Nucleus 0.008 0.008 1 false P22139 DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11 Saccharomyces cerevisiae BJ5464 Rpb3 His-Bio Baker's yeast Nucleus 0.013 0.013 1 false P38902 DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC 4 Saccharomyces cerevisiae BJ5464 Rpb3 His-Bio Baker's yeast Nucleus 0.008 0.008 1 false P40422 TRANSCRIPTION INITIATION FACTOR IIB Saccharomyces cerevisiae Baker's yeast 0.038 0.038 1 true Escherichia coli P29055 TATA-box-binding protein Saccharomyces cerevisiae 0.020 0.020 1 true Escherichia coli P13393 Transcription initiation factor IIF subunit alpha Saccharomyces mikatae 0.082 0.082 1 true Escherichia coli P29055 Transcription initiation factor IIF subunit beta Saccharomyces cerevisiae 0.047 0.047 1 true Escherichia coli P41896 template DNA synthetic construct CGAGAACAGTAGCACGCTGTGTATATAATAGTGTGTTGTACATAGCGGAGGTCGGTGGGGCACAACTGCGCT DNA SINGLE STRANDED true nontemplate DNA synthetic construct AGCGCAGTTGTGCTATGATATTTTTATGTATGTACAACACACTATTATATACACAGCGTGCTACTGTTCTCG DNA SINGLE STRANDED true RNA synthetic construct AUAUCA OTHER SINGLE STRANDED true singleParticle particle 0.15 7.5

25 mM HEPES-KOH pH 7.5, 180 mM Potassium acetate, 5 % Glycerol, 5 mM DTT

ETHANE OTHER Grids were glow-discharged for 20 s before deposition of 4 microliters sample and incubated for 30 s. Grids were washed twice with 4 microliters distilled water, blotted, and then vitrified. FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 2 1.0 2.5 37000.0 37169.0 FEI TITAN KRIOS AUTOGRID HOLDER GATAN K2 (4k x 4k) 2972 25

Particles were picked using EMAN2 and were processed using RELION 1.2.

Each particle

C1 OTHER 7.8 OTHER RELION, 1.2

The density was filtered according to local resolution and further a temperature factor of minus 340 A2 was applied.

4439

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