2023-02-15 REL RCSB RCSB RCSB 2022-04-27 2023-02-15 2023-02-15 2023-02-15 National Institutes of Health/National Heart, Lung, and Blood Institute (NIH/NHLBI) United States National Institutes of Health/National Institute of Arthritis and Musculoskeletal and Skin Diseases (NIH/NIAMS) United States Tomogram of platelet filopodia in presence of SARS-CoV-2 spike protein Kuhn CC Basnet N Bodakuntla S Nichols S Martinez-Sanchez A Agostini L Soh YM Takagi J Biertumpfel C Mizuno N Kuhn CC Basnet N Bodakuntla S Alvarez-Brecht P Nichols S Martinez-Sanchez A Agostini L Soh YM Takagi J Biertumpfel C Mizuno N Direct Cryo-ET observation of platelet deformation induced by SARS-CoV-2 spike protein. Nat Commun UK 14 620 620 2023 36739444 doi:10.1038/s41467-023-36279-5 2041-1723 EMD-26794 associated EM volume Platelet deformation induced by SARS-CoV-2 spike protein Platelet deformation induced by SARS-CoV-2 spike protein 0 1 Homo sapiens platelet 1
isolated from whole blood
 Spike glycoprotein 1 1 Spike glycoprotein Severe acute respiratory syndrome coronavirus 2
"SPIKE_SARS2 Spike glycoprotein(UniProt P0DTC2) RRAR furin cleavage site mutated to GSAGC-terminal Rho1D4-tag(TETSQVAPA) fused with spacer GSSG"
Homo sapiens LEVO MFVFLVLLPLVSSQCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQDVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPGSAGSVASQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSKRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDSFKEELDKYFKNHTSPDVDLGDISGINASVVNIQKEIDRLNEVAKNLNESLIDLQELGKYEQYIKWPWYIWLGFIAGLIAIVMVTIMLCCMTSCCSCLKGCCSCGSCCKFDEDDSEPVLKGVKLHYTGSSGTETSQVAPA tomography cell 7.4 Quantifoil GOLD 200 ETHANE NO SECTIONING FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 3.0 5.0 33000.0 FEI TITAN KRIOS AUTOGRID HOLDER NITROGEN GATAN K3 (6k x 4k) 5760 4096 61 2.0 1 IMOD 61 emd_26794.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 1023 1440 464 76 -76 -84 1023 1440 464 11293.92 15897.6 5122.56 90.0 90.0 90.0 X Y Z -14.314463 10.575753 0.0010638427 0.22624522 11.04 11.04 11.04 AUTHOR Tomogram of platelet filopodia in presence of SARS-CoV-2 spike protein