Structure of a ribosome with tethered subunits

2026-09-23 REL RCSB INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY EXPERIMENTAL_SUMMARY em_admin _em_admin.last_update EXPERIMENTAL_SUMMARY em_admin struct_ref _em_admin.last_update _struct_ref.pdbx_seq_one_letter_code EXPERIMENTAL_SUMMARY em_admin _em_admin.last_update DATABASE_REFERENCES atom_site chem_comp_atom chem_comp_bond em_admin struct_ref _atom_site.auth_atom_id _atom_site.label_atom_id _chem_comp_atom.atom_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _em_admin.last_update _struct_ref.pdbx_seq_one_letter_code DATA_COLLECTION em_admin _em_admin.last_update RCSB RCSB 2022-04-15 2022-08-17 2022-08-17 2026-09-23 National Science Foundation (NSF, United States) MCB-1716766 United States Other private RGP0015/2017 Other private W911NF-16-1-0372 National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) GM122579 United States Structure of a ribosome with tethered subunits Kim DS Watkins A Bidstrup E Lee J Topkar VV Kofman C Schwarz KJ Liu Y Pintilie G Roney E Das R Jewett MC Engineered, Tethered, Synthetic, RIBOSOME Kim DS Watkins A Bidstrup E Lee J Topkar V Kofman C Schwarz KJ Liu Y Pintilie G Roney E Das R Jewett MC Three-dimensional structure-guided evolution of a ribosome with tethered subunits. Nat.Chem.Biol. US 18 990 998 2022 35836020 doi:10.1038/s41589-022-01064-w 1552-4469 Pettersen EF Goddard TD Huang CC Meng EC Couch GS Croll TI Morris JH Ferrin TE UCSF ChimeraX: Structure visualization for researchers, educators, and developers. Protein Sci US 30 70 82 2021 doi:10.1002/pro.3943 1469-896X 0795 PRCIEI Punjani A Rubinstein JL Fleet DJ Brubaker MA cryoSPARC: algorithms for rapid unsupervised cryo-EM structure determination. Nat Methods US 14 290 296 2017 doi:10.1038/nmeth.4169 1548-7105 Liebschner D Afonine PV Baker ML Bunkoczi G Chen VB Croll TI Hintze B Hung LW Jain S McCoy AJ Moriarty NW Oeffner RD Poon BK Prisant MG Read RJ Richardson JS Richardson DC Sammito MD Sobolev OV Stockwell DH Terwilliger TC Urzhumtsev AG Videau LL Williams CJ Adams PD Macromolecular structure determination using X-rays, neutrons and electrons: recent developments in Phenix. Acta Crystallogr D Struct Biol 75 861 877 2019 31588918 doi:10.1107/S2059798319011471 2059-7983 7uph FULLOVERLAP EMDB EMD-26666 associated EM volume

Ribosome with tethered subunits Ribosome with tethered subunits 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 Escherichia coli 30S ribosomal protein S14 Escherichia coli 0.011475363999999998 1 Escherichia coli LEVO AKQSMKAREVKRVALADKYFAKRAELKAIISDVNASDEDRWNAVLKLQTLPRDSSPSRQRNRCRQTGRPHGFLRKFGLSR IKVREAAMRGEIPGLKKASW A0A829E173 30S ribosomal protein S15 Escherichia coli 0.010159620999999999 1 Escherichia coli LEVO SLSTEATAKIVSEFGRDANDTGSTEVQVALLTAQINHLQGHFAEHKKDHHSRRGLLRMVSQRRKLLDYLKRKDVARYTQL IERLGLRR D7XN21 30S ribosomal protein S16 Escherichia coli 0.009207571999999999 1 Escherichia coli LEVO MVTIRLARHGAKKRPFYQVVVADSRNARNGRFIERVGFFNPIASEKEEGTRLDLDRIAHWVGQGATISDRVAALIKEVNK AA C3SYP2 30S ribosomal protein S17 Escherichia coli 0.009263946 1 Escherichia coli LEVO KIRTLQGRVVSDKMEKSIVVAIERFVKHPIYGKFIKRTTKLHVHDENNECGIGDVVEIRECRPLSKTKSWTLVRVVEKAV A0A080IK26 30S ribosomal protein S18 Escherichia coli 0.006466477 1 Escherichia coli LEVO EIDYKDIATLKNYITESGKIVPSRITGTRAKYQRQLARAIKRARYLSLLPYTDRH W1EY92 30S ribosomal protein S19 Escherichia coli 0.009057626 1 Escherichia coli LEVO RSLKKGPFIDLHLLKKVEKAVESGDKKPLRTWSRRSTIFPNMIGLTIAVHNGRQHVPVFVTDEMVGHKLGEFAPTRTYR A0A7U9LGZ0 30S ribosomal protein S20 Escherichia coli 0.00950619 1 Escherichia coli LEVO NIKSAKKRAIQSEKARKHNASRRSMMRTFIKKVYAAIEAGDKAAAQKAFNEMQPIVDRQAAKGLIHKNKAARHKANLTAQ INKLA C3TRH7 30S ribosomal protein S21 Escherichia coli 0.006629743999999999 1 Escherichia coli LEVO PVIKVRENEPFDVALRRFKRSCEKAGVLAEVRRREFYEKPTTERKRAKASAVKRHA A0A5C9AJ78 Tethered rRNA Escherichia coli 1.439279875 1 AAUUGAAGAGUUUGAUCAUGGCUCAGAUUGAACGCUGGCGGCAGGCCUAACACAUGCAAGUCGAACGGUAACAGGAAGAA GCUUGCUUCUUUGCUGACGAGUGGCGGACGGGUGAGUAAUGUCUGGGAAACUGCCUGAUGGAGGGGGAUAACUACUGGAA ACGGUAGCUAAUACCGCAUAACGUCGCAAGACCAAAGAGGGGGACCUUCGGGCCUCUUGCCAUCGGAUGUGCCCAGAUGG GAUUAGCUAGUAGGUGGGGUAACGGCUCACCUAGGCGACGAUCCCUAGCUGGUCUGAGAGGAUGACCAGCCACACUGGAA CUGAGACACGGUCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUAUUGCACAAUGGGCGCAAGCCUGAUGCAGCCAUGCC GCGUGUAUGAAGAAGGCCUUCGGGUUGUAAAGUACUUUCAGCGGGGAGGAAGGGAGUAAAGUUAAUACCUUUGCUCAUUG ACGUUACCCGCAGAAGAAGCACCGGCUAACUCCG(PSU)GCCAGCAGCC(G7M)CGGUAAUACGGAGGGUGCAAGCGUUA AUCGGAAUUACUGGGCGUAAAGCGCACGCAGGCGGUUUGUUAAGUCAGAUGUGAAAUCCCCGGGCUCAACCUGGGAACUG CAUCUGAUACUGGCAAGCUUGAGUCUCGUAGAGGGGGGUAGAAUUCCAGGUGUAGCGGUGAAAUGCGUAGAGAUCUGGAG GAAUACCGGUGGCGAAGGCGGCCCCCUGGACGAAGACUGACGCUCAGGUGCGAAAGCGUGGGGAGCAAACAGGAUUAGAU ACCCUGGUAGUCCACGCCGUAAACGAUGUCGACUUGGAGGUUGUGCCCUUGAGGCGUGGCUUCCGGAGCUAACGCGUUAA GUCGACCGCCUGGGGAGUACGGCCGCAAGGUUAAAACUCAAAUGAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGUG GUUUAAUUCGAU(2MG)(5MC)AACGCGAAGAACCUUACCUGGUCUUGACAUCCACGGAAGUUUUCAGAGAUGAGAAUGU GCCUUCGGGAACCGUGAGACAGGUGCUGCAUGGCUGUCGUCAGCUCGUGUUGUGAAAUGUUGGGUUAAGUCCCGCAACGA GCGCAACCCUUAUCCUUUGUUGCCAGCGGUCCGGCCGGGAACUCAAAGGAGACUGCCAGUGAUAAACUGGAGGAAGGUGG GGAUGACGUCAAGUCAUCAUG(2MG)CCCUUACGACCAGGGCUACACACGUGCUACAAUGGCGCAUACAAAGAGAAGCGA CCUCGCGAGAGCAAGCGGACCUCAUAAAGUGCGUCGUAGUCCGGAUUGGAGUCUGCAACUCGACUCCAUGAAGUCGGAAU CGCUAGUAAUCGUGGAUCAGAAUGCCACGGUGAAUACGUUCCCGGGCCUUGUACACACCG(4OC)CCGU(5MC)ACACCA UGGGAGUGGGUUGCAAAAGAAGUAGGUAGCUUAACCAGUCAAUAAGUCUUGAGCUAACCGGUACUAAUGAACCGUGAGGC UUAACCUUGGUUAAGCGACUAAGCGUACACGGUGGAUGCCCUGGCAGUCAGAGGCGAUGAAGGACGUGCUAAUCUGCGAU AAGCGUCGGUAAGGUGAUAUGAACCGUUAUAACCGGCGAUUUCCGAAUGGGGAAACCCAGUGUGUUUCGACACACUAUCA UUAACUGAAUCCAUAGGUUAAUGAGGCGAACCGGGGGAACUGAAACAUCUAAGUACCCCGAGGAAAAGAAAUCAACCGAG AUUCCCCCAGUAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCUGAAUCAGUGUGUGUGUUAGUGGAAGCGUCUGGAAAG GCGCGCGAUACAGGGUGACAGCCCCGUACACAAAAAUGCACAUGCUGUGAGCUCGAUGAGUAGGGCGGGACACGUGGUAU CCUGUCUGAAUAUGGGGGGACCAUCCUCCAAGGCUAAAUACUCCUGACUGACCGAUAGUGAACCAGUACCGUGAGGGAAA GGCGAAAAGAACCCCGGCGAGGGGAGUGAAAAAGAACCUGAAACCGUGUACGUACAAGCAGUGGGAGCACGCUUAGGCGU GUGACUGCGUACCUUUUGUAUAAUGGGUCAGCGACUUAUAUUCUGUAGCAAGGUUAACCGAAUAGGGGAGCCGAAGGGAA ACCGAGUCUUAACUGGGCGUUAAGUUGCAGGGUAUAGACCCGAAACCCGGUGAUCUAGCCAUGGGCAGGUUGAAGGUUGG GUAACACUAACUGGAGGACCGAACCGACUAAU(1MG)(PSU)(5MU)GAAAAAUUAGCGGAUGACUUGUGGCUGGGGGUG AAAGGCCAAUCAAACCGGGAGAUAGCUGGUUCUCCCCGAAAGCUAUUUAGGUAGCGCCUCGUGAAUUCAUCUCCGGGGGU AGAGCACUGUUUCGGCAAGGGGGUCACUUACCAACCCGAUGCAAACUGCGAAUACCGGAGAAUGUUAUCACGGGAGACAC ACGGCGGG(PSU)GCUAACGUCCGUCGUGAAGAGGGAAACAACCCAGACCGCCAGCUAAGGUCCCAAAGUCAUGGUUAAG UGGGAAACGAUGUGGGAAGGCCCAGACAGCCAGGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAGAAAGCGUAAUAGCUC ACUGGUCGAGUCGGCCUGCGCGGAAGAUGUAACGGGGCUAAACCAUGCACCGAAGCUGCGGCAGCGACGCUUAUGCGUUG UUGGGUAGGGGAGCGUUCUGUAAGCCUGCGAAGGUGUGCUGUGAGGCAUGCUGGAGGUAUCAGAAGUGCGAAUGCUGACA UAAGUAACGAUAAAGCGGGUGAAAAGCCCGCUCGCCGGAAGACCAAGGGUUCCUGUCCAACGUUAAUCGGGGCAGGGUGA GUCGACCCCUAAGGCGAGGCCGAAAGGCGUAGUCGAUGGGAAACAGGUUAAUAUUCCUGUACUUGGUGUUACUGCGAAGG GGGGACGGAGAAGGCUAUGUUGGCCGGGCGACGGUUGUCCCGGUUUAAGCGUGUAGGCUGGUUUUCCAGGCAAAUCCGGA AAAUCAAGGCUGAGGCGUGAUGACGAGGCACUACGGUGCUGAAGCAACAAAUGCCCUGCUUCCAGGAAAAGCCUCUAAGC AUCAGGUAACAUCAAAUCGUACCCCAAACCGACAC(6MZ)GGUGGUCAGGUAGAGAAUACCAAGGCGCUUGAGAGAACUC GGGUGAAGGAACUAGGCAAAAUGGUGCCGUAACUUCGGGAGAAGGCACGCUGAUAUGUAGGUGAGGUCCCUCGCGGAUGG AGCUGAAAUCAGUCGAAGAUACCAGCUGGCUGCAACUGUUUAUUAAAAACACAGCACUGUGCAAACACGAAAGUGGACGU AUACGGUGUGACGCCU(2MG)CCCGGUGCCGGAAGGUUAAUUGAUGGGGUUAGCGCAAGCGAAGCUCUUGAUCGAAGCCC CGGUAAACGGCGGCCG(PSU)AAC(3TD)A(PSU)AACGGUCCUAAGGUAGCGAAA(5MU)UCCUUGUCGGGUAAGUUCC GAC(5MC)UGCACGAAUGGCGUAAUGAUGGCCAGGCUGUCUCCACCCGAGACUCAGUGAAAUUGAACUCGCUGUG(6MZ) AGAUGCAGUGUACCCGCGGCAAGACGGAAAGACCCCGU(G7M)AACCUUUACUAUAGCUUGACACUGAACAUUGAGCCUU GAUGUGUAGGAUAGGUGGGAGGCUUUGAAGUGUGGACGCCAGUCUGCAUGGAGCCGACCUUGAAAUACCACCCUUUAAUG UUUGAUGUUCUAACGUUGACCCGUAAUCCGGGUUGCGGACAGUGUCUGGUGGGUAGUUUGACUG(OMG)GGCGGUCUCCU CCUAAAGAGUAACGGAGGAGCACGAAGGUUGGCUAAUCCUGGUCGGACAUCAGGAGGUUAGUGCAAUGGCAUAAGCCAGC UUGACUGCGAGCGUGACGGCGCGAGCAGGUGCGAAAGCAGGUCAUAGUGAUCCGGUGGUUCUGAAUGGAAGGGCCAUCGC UCAACGGAUAAAAGGUACUCCG(2MG)GGAUAACAGGC(PSU)GAUACCGCCCAAGAGUUCAUAUCGACGGCGGUGUUUG GCA(OMC)CUCG(2MA)(PSU)GUCGGCUCAUCACAUCCUGGGGCUGAAGUAGGUCCCAAGGGUAUGGC(OMU)GUUCGC CAUUUAAAGUGGUACGCGAGC(PSU)GGGUUUAGAACGUCGUGAGACAGU(PSU)CGGUCCCUAUCUGCCGUGGGCGCUG GAGAACUGAGGGGGGCUGCUCCUAGUACGAGAGGACCGGAGUGGACGCAUCACUGGUGUUCGGGUUGUCAUGCCAAUGGC ACUGCCCGGUAGCUAAAUGCGGAAGAGAUAAGUGCUGAAAGCAUCUAAGCACGAAACUUGCCCCGAGAUGAGUUCUCCCU GACCCUUUAAGGGUCCUGAAGGAACGUUGAAGACGACGACGUUGAUAGGCCGGGUGUGUAAGGACGACCUUCGGGAGGGC GCUUACCACUUUGUGAUUCAUGACUGGGGUGAAGUCG(UR3)AACAAGGUAACCGUAGG(2MG)G(MA6)(MA6)CCUGC GGUUGGAUCA 5S rRNA Escherichia coli 0.038177762000000004 1 GCCUGGCGGCCGUAGCGCGGUGGUCCCACCUGACCCCAUGCCGAACUCAGAAGUGAAACGCCGUAGCGCCGAUGGUAGUG UGGGGUCUCCCCAUGCGAGAGUAGGGAACUGCCAGGCA CP023870.1 50S ribosomal protein L2 Escherichia coli 0.029663244 1 Escherichia coli LEVO AVVKCKPTSPGRRHVVKVVNPELHKGKPFAPLLEKNSKSGGRNNNGRITTRHIGGGHKQAYRIVDFKRNKDGIPAVVERL EYDPNRSANIALVLYKDGERRYILAPKGLKAGDQIQSGVDAAIKPGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTY VQIVARDGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGRNFG KHPVTPWGVQTKGKKTRSNKRTDKFIVRRRS P60422 50S ribosomal protein L3 Escherichia coli 0.022277534999999998 1 Escherichia coli LEVO MIGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRVTKPEAGHFAKAGVEAGRGLW EFRLAEGEEFTVGQSISVELFADVKKVDVTGTSKGKGFAGTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKK MAGQMGNERVTVQSLDVVRVDAERNLLLVKGAVPGATGSDLIVKPAVKA P60438 50S ribosomal protein L4 Escherichia coli 0.022121566 1 Escherichia coli LEVO MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRS GGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALEDVLIITGELDENLFLA ARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEMLA A0A7U9FY55 50S ribosomal protein L5 Escherichia coli 0.020073234 1 Escherichia coli LEVO AKLHDYYKDEVVKKLMTEFNYNSVMQVPRVEKITLNMGVGEAIADKKLLDNAAADLAAISGQKPLITKARKSVAGFKIRQ GYPIGCKVTLRGERMWEFFERLITIAVPRIRDFRGLSAKSFDGRGNYSMGVREQIIFPEIDYDKVDRVRGLDITITTTAK SDEEGRALLAAFDFPFR A0A4P8BX24 50S ribosomal protein L6 Escherichia coli 0.018801598 1 Escherichia coli LEVO SRVAKAPVVVPAGVDVKINGQVITIKGKNGELTRTLNDAVEVKHADNTLTFGPRDGYADGWAQAGTARALLNSMVIGVTE GFTKKLQLVGVGYRAAVKGNVINLSLGFSHPVDHQLPAGITAECPTQTEIVLKGADKQVIGQVAADLRAYRRPEPYKGKG VRYADEVVRTKEAKKK A0A8E0IYC4 50S ribosomal protein L13 Escherichia coli 0.016050606 1 Escherichia coli LEVO MKTFTAKPETVKRDWYVVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVLNADKVAVTGNKRTDKVYYHHTGH IGGIKQATFEEMIARRPERVIEIAVKGMLPKGPLGRAMFRKLKVYAGNEHNHAAQQPQVLDI S1EW51 50S ribosomal protein L14 Escherichia coli 0.01345191 1 Escherichia coli LEVO MIQEQTMLNVADNSGARRVMCIKVLGGSHRRYAGVGDIIKITIKEAIPRGKVKKGDVLKAVVVRTKKGVRRPDGSVIRFD GNACVLLNNNSEQPIGTRIFGPVTRELRSEKFMKIISLAPEV S1NW45 50S ribosomal protein L15 Escherichia coli 0.015008470999999999 1 Escherichia coli LEVO MRLNTLSPAEGSKKAGKRLGRGIGSGLGKTGGRGHKGQKSRSGGGVRRGFEGGQMPLYRRLPKFGFTSRKAAITAEIRLS DLAKVEGGVVDLNTLKAANIIGIQIEFAKVILAGEVTTPVTVRGLRVTKGARAAIEAAGGKIEE A0A037Y8L6 50S ribosomal protein L16 Escherichia coli K-12 0.015327261 1 Escherichia coli LEVO MLQPKRTKFRKMHKGRNRGLAQGTDVSFGSFGLKAVGRGRLTARQIEAARRAMTRAVKRQGKIWIRVFPDKPITEKPLAV (4D4)MGKGKGNVEYWVALIQPGKVLYEMDGVPEELAREAFKLAAAKLPIKTTFVTKTVM P0ADY7 50S ribosomal protein L17 Escherichia coli 0.013721938 1 Escherichia coli LEVO MRHRKSGRQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAFARTRDNEIVAKLF NELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRSE A0A829CNM8 30S ribosomal protein S2 Escherichia coli 0.024971763999999997 1 Escherichia coli LEVO VSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKIASRKGKILFVGTKRAASEAVKDA ALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGTFDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFV IDADHEHIAIKEANNLGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREGRSQ P0A7V0 30S ribosomal protein S3 Escherichia coli 0.023078784999999997 1 Escherichia coli LEVO GQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKG EDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAE IARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEI A0A376HTV6 30S ribosomal protein S4 Escherichia coli 0.023383002 1 Escherichia coli LEVO ARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGARKPRLSDYGVQLREKQKVRRIYGVLERQFRNYYKEAAR LKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLVSHKAIMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALEL AEQREKPTWLEVDAGKMEGTFKRKPERSDLSADINEHLIVELYSK L3PZ69 30S ribosomal protein S5 Escherichia coli 0.015804282 1 Escherichia coli LEVO ELQEKLIAVNRVSKTVKGGRIFSFTALTVVGDGNGRVGFGYGKAREVPAAIQKAMEKARRNMINVALNNGTLQHPVKGVH TGSRVFMQPASEGTGIIAGGAMRAVLEVAGVHNVLAKAYGSTNPINVVRATIDGLENMNSPEMVAAKRGK F4TL26 30S ribosomal protein S6 Escherichia coli 0.011669370999999998 1 Escherichia coli LEVO MRHYEIVFMVHPDQSEQVPGMIERYTAAITGAEGKIHRLEDWGRRQLAYPINKLHKAHYVLMNVEAPQEVIDELETTFRF NDAVIRSMVMRTKHAVTEAS P02358 30S ribosomal protein S7 Escherichia coli 0.016861523 1 Escherichia coli LEVO PRRRVIGQRKILPDPKFGSELLAKFVNILMVDGKKSTAESIVYSALETLAQRSGKSELEAFEVALENVRPTVEVKSRRVG GSTYQVPVEVRPVRRNALAMRWIVEAARKRGDKSMALRLANELSDAAENKGTAVKKREDVHRMAEANKAFA P02359 30S ribosomal protein S8 Escherichia coli 0.014015361 1 Escherichia coli LEVO SMQDPIADMLTRIRNGQAANKAAVTMPSSKLKVAIANVLKEEGFIEDFKVEGDTKPELELTLKYFQGKAVVESIQRVSRP GLRIYKRKDELPKVMAGLGIAVVSTSKGVMTDRAARQAGLGGEIICYVA A0A828U358 30S ribosomal protein S9 Escherichia coli 0.014554881999999998 1 Escherichia coli LEVO NQYYGTGRRKSSAARVFIKPGNGKIVINQRSLEQYFGRETARMVVRQPLELVDMVEKLDLYITVKGGGISGQAGAIRHGI TRALMEYDESLRSELRKAGFVTRDARQVERKKVGLRKARRRPQFSKR V0A2W7 30S ribosomal protein S10 Escherichia coli 0.011196988 1 Escherichia coli LEVO RIRIRLKAFDHRLIDQATAEIVETAKRTGAQVRGPIPLPTRKERFTVLISPHVNKDARDQYEIRTHLRLVDIVEPTEKTV DALMRLDLAAGVDVQISL A0A0H3EQD3 30S ribosomal protein S11 Escherichia coli 0.0124872 1 Escherichia coli LEVO RKQVSDGVAHIHASFNNTIVTITDRQGNALGWATAGGSGFRGSRKSTPFAAQVAAERCADAVKEYGIKNLEVMVKGPGPG RESTIRALNAAGFRITNITDVTPIPHNGCRPPKKRRV P0A7R9 30S ribosomal protein S12 Escherichia coli 0.013683052999999999 1 Escherichia coli LEVO ATVNQLVRKPRARKVAKSNVPALEACPQKRGVCTRVYTTTPKKPNSALRKVCRVRLTNGFEVTSYIGGEGHNLQEHSVIL IRGGRVK(D2T)LPGVRYHTVRGALDCSGVKDRKQARSKYGVKRPKA I2UHF1 30S ribosomal protein S13 Escherichia coli 0.012625753 1 Escherichia coli LEVO ARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAKFVVEGDLRREISMSIKRLM DLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKP S1P5F8 50S ribosomal protein L32 Escherichia coli 0.006332249 1 Escherichia coli LEVO AVQQNKPTRSKRGMRRSHDALTAVTSLSVDKTSGEKHLRHHITADGYYRGRKVIAK A0A828UBL8 50S ribosomal protein L33 Escherichia coli 0.005814842 1 Escherichia coli LEVO GIREKIKLVSSAGTGHFYTTTKNKRTKPEKLELKKFDPVVRQHVIYKEAK A0A080IDV9 50S ribosomal protein L34 Escherichia coli 0.005397463 1 Escherichia coli LEVO MKRTFQPSVLKRNRSHGFRARMATKNGRQVLARRRAKGRARLTVSK B7MGC4 50S ribosomal protein L35 Escherichia coli 0.007181835 1 Escherichia coli LEVO PKIKTVRGAAKRFKKTGKGGFKHKHANLRHILTKKATKRKRHLRPKAMVSKGDLGLVIACLPYA E9XJC8 50S ribosomal protein L36 Escherichia coli 0.00437739 1 Escherichia coli LEVO MKVRASVKKLCRNCKIVKRDGVIRVICSAEPKHKQRQG A0A0E2L017 50S ribosomal protein L18 Escherichia coli 0.012663470999999999 1 Escherichia coli LEVO DKKSARIRRATRARRKLQELGATRLVVHRTPRHIYAQVIAPNGSEVLVAASTVEKAIAEQLKYTGNKDAAAAVGKAVAER ALEKGIKDVSFDRSGFQYHGRVQALADAAREAGLQF A0A1X3KXD9 50S ribosomal protein L19 Escherichia coli 0.013028082 1 Escherichia coli LEVO SNIIKQLEQEQMKQDVPSFRPGDTVEVKVWVVEGSKKRLQAFEGVVIAIRNRGLHSAFTVRKISNGEGVERVFQTHSPVV DSISVKRRGAVRKAKLYYLRERTGKAARIKERLN S1PSA3 50S ribosomal protein L20 Escherichia coli 0.013396828 1 Escherichia coli LEVO ARVKRGVIARARHKKILKQAKGYYGARSRVYRVAFQAVIKAGQYAYRDRRQRKRQFRQLWIARINAAARQNGISYSKFIN GLKKASVEIDRKILADIAVFDKVAFTALVEKAKAALA L4J8J1 50S ribosomal protein L21 Escherichia coli 0.011586374 1 Escherichia coli LEVO MYAVFQSGGKQHRVSEGQTVRLEKLDIATGETVEFAEVLMIANGEEVKIGVPFVDGGVIKAEVVAHGRGEKVKIVKFRRR KHYRKQQGHRQWFTDVKITGISA A0A8E0K7J3 50S ribosomal protein L22 Escherichia coli 0.012253359 1 Escherichia coli LEVO METIAKHRHARSSAQKVRLVADLIRGKKVSQALDILTYTNKKAAVLVKKVLESAIANAEHNDGADIDDLKVTKIFVDEGP SMKRIMPRAKGRADRILKRTSHITVVVSDR P61175 50S ribosomal protein L23 Escherichia coli 0.010546472 1 Escherichia coli LEVO MIREERLLKVLRAPHVSEKASTAMEKSNTIVLKVAKDATKAEIKAAVQKLFEVEVEVVNTLVVKGKVKRHGQRIGRRSDW KKAYVTLKEGQNL A0A8E0K1Q0 50S ribosomal protein L24 Escherichia coli 0.011078873999999999 1 Escherichia coli LEVO AAKIRRDDEVIVLTGKDKGKRGKVKNVLSSGKVIVEGINLVKKHQKPVPALNQPGGIVEKEAAIQVSNVAIFNAATGKAD RVGFRFEDGKKVRFFKSNSETI A0A8E0FZY0 50S ribosomal protein L25 Escherichia coli 0.010713465 1 Escherichia coli LEVO MFTINAEVRKEQGKGASRRLRAANKFPAIIYGGKEAPLAIELDHDKVMNMQAKAEFYSEVLTIVVDGKEIKVKAQDVQRH PYKPKLQHIDFVRA D7XH79 50S ribosomal protein L27 Escherichia coli 0.008174394 1 Escherichia coli LEVO RNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTKFHAGANVGCGRDHTLFAKADGKVKFEVKGPKNRKFISIEAE A0A1X3JCC7 50S ribosomal protein L28 Escherichia coli 0.008896353999999999 1 Escherichia coli LEVO SRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDKKGIDTVLAELRARGEKY A0A0E2KZD0 50S ribosomal protein L29 Escherichia coli 0.007155267 1 Escherichia coli LEVO KAKELREKSVEELNTELLNLLREQFNLRMQAASGQLQQSHLLKQVRRDVARVKTLLNEKAGA D7Y3D2 50S ribosomal protein L30 Escherichia coli 0.006423625 1 Escherichia coli LEVO AKTIKITQTRSAIGRLPKHKATLLGLGLRRIGHTVEREDTPAIRGMINAVSFMVKVEE A0A7U9B9V2 singleParticle particle 7.5 Quantifoil R2/1 COPPER GLOW DISCHARGE ETHANE TFS TALOS SPOT SCAN BRIGHT FIELD FIELD EMISSION GUN 200 1.2 2.2 GATAN K3 (6k x 4k) 1.35 50.0 1 102279 NONE 4YBB 4.18 FSC 0.143 CUT-OFF cryoSPARC 3.1 34852 NOT APPLICABLE NOT APPLICABLE emd_26666.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 500 500 500 0 0 0 500 500 500 430.0 430.0 430.0 90.0 90.0 90.0 X Y Z -0.2099422 1.0729445 0.004683353 0.058097534 0.86 0.86 0.86 0.1 AUTHOR ::::EMDATABANK.org::::EMD-26666:::: Cryo-EM structure of the RiboTv3 tethered ribosome. Raw micrograph acquisition was done with a Talos Arctica (200kV) microscope at 100,000X magnification. Map generation was done with CryoSPARC. 4YBB PDB experimental model AB INITIO MODEL emd_26666_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 500 500 500 0 0 0 500 500 500 430.0 430.0 430.0 90.0 90.0 90.0 X Y Z -2.0911973 2.007942 0.004423724 0.24701211 0.86 0.86 0.86 AUTHOR ::::EMDATABANK.org::::EMD-26666:::: D_1000263105_em-volume Half Map A emd_26666_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 500 500 500 0 0 0 500 500 500 430.0 430.0 430.0 90.0 90.0 90.0 X Y Z -2.1367896 2.1251562 0.0044404855 0.24666558 0.86 0.86 0.86 AUTHOR ::::EMDATABANK.org::::EMD-26666:::: D_1000263105_em-volume Half Map B