REL PDBe PDBe PDBe 2014-05-27 2014-06-18 2014-07-09 2014-08-20 Structure of SMG1C complex, comprising SMG1 kinase, SMG8 and SMG9 Melero R Uchiyama A Castano R Kataoka N Kurosawa H Ohno S Yamashita A Llorca O NMD, SMG1, SMG8, SMG9, PIKK, RNA degradation Melero R Uchiyama A Castano R Kataoka N Kurosawa H Ohno S Yamashita A Llorca O Structures of SMG1-UPFs complexes: SMG1 contributes to regulate UPF2-dependent activation of UPF1 in NMD STRUCTURE 22 1105 1119 2014 25002321 doi:10.1016/j.str.2014.05.015 SMG1C complex, comprising SMG1 kinase, SMG8 and SMG9 SMG1C complex, comprising SMG1 kinase, SMG8 and SMG9 3 0.58 Serine/threonine-protein kinase SMG1 Homo sapiens Human 0.41 true Homo sapiens 293T cells Q96Q15 GO:0006281 GO:0016070 GO:0000184 GO:0005524 SMG8 Homo sapiens Human 0.109 true Homo sapiens 293T cells Q8ND04 GO:0000184 IPR028802 SMG9 Homo sapiens Human 0.06 true Homo sapiens 293T cells Q9H0W8 GO:0000184 IPR027417 IPR019354 singleParticle particle 0.01 7.5
10 mM HEPES-KOH, 150 mM NaCl, 20% glycerol, 10 mM MgCl2
 NEGATIVE
1% uranyl formate
400 mesh grid with thin carbon support, glow discharged
 NONE OTHER JEOL 1230 FLOOD BEAM BRIGHT FIELD TUNGSTEN HAIRPIN 100 2.9 1.5 2.5 40000.0 54926.0 JEOL Objective lens astigmatism was corrected using a TVIPS F416 CMOS and the EM-MENU software (TVIPS) 2012-04-05 TVIPS TEMCAM-F416 (4k x 4k) 15.6 542 15
Using a TVIPS F416 CMOS and the EM-TOOLS software (TVIPS)
16.
Each micrograph using BSOFT
 C1 OTHER 20.8 OTHER EMAN, EMAN2, Xmipp 21020 490 emd_2663.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 144 144 144 0 0 0 144 144 144 408.96 408.96 408.96 90.0 90.0 90.0 X Y Z -2.93224406 11.791925429999999 -0.00040864 0.72179729 2.84 2.84 2.84 3.4 AUTHOR Recosntruction of the SMG1C complex, comprising SMG1, SMG8 and SMG9
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 4JSP RIGID BODY FIT Chimera
The structure was separately fitted using Chimera
Correlation coefficient REAL 3KGV RIGID BODY FIT Chimera
HEAT repeat regions from DNA-PKcs were separately fitted into SMG1 using Chimera
Correlation coefficient REAL