2024-11-13 REL RCSB RCSB RCSB 2022-03-26 2022-06-08 2022-06-08 2024-11-13 National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) SSGCID United States SARS-CoV-2 spike in complex with AHB2-2GS-SB175 (local refinement of the RBD and AHB2) Park YJ Seattle Structural Genomics Center for Infectious Disease (SSGCID) Veesler D SARS-CoV-2, COVID-19, spike glycoprotein, fusion protein, neutralizing antibodies, Structural Genomics, Seattle Structural Genomics Center for Infectious Disease, SSGCID, Inhibitor, VIRAL PROTEIN Hunt AC Case JB Park YJ Cao L Wu K Walls AC Liu Z Bowen JE Yeh HW Saini S Helms L Zhao YT Hsiang TY Starr TN Goreshnik I Kozodoy L Carter L Ravichandran R Green LB Matochko WL Thomson CA Vogeli B Kruger A VanBlargan LA Chen RE Ying B Bailey AL Kafai NM Boyken SE Ljubetic A Edman N Ueda G Chow CM Johnson M Addetia A Navarro MJ Panpradist N Gale Jr M Freedman BS Bloom JD Ruohola-Baker H Whelan SPJ Stewart L Diamond MS Veesler D Jewett MC Baker D Multivalent designed proteins neutralize SARS-CoV-2 variants of concern and confer protection against infection in mice. Sci Transl Med US 14 eabn1252 eabn1252 2022 35412328 doi:10.1126/scitranslmed.abn1252 1946-6242 7uhb FULLOVERLAP SARS-CoV-2 spike in complex with AHB2-2GS-SB175 (local refinement of the RBD and AHB2) SARS-CoV-2 spike in complex with AHB2-2GS-SB175 (local refinement of the RBD and AHB2) 0 1 2 Severe acute respiratory syndrome coronavirus 2 SARS-CoV-2 spike 1 1 Severe acute respiratory syndrome coronavirus 2 AHB2-2GS-SB175 1 2 Synthetic construct Spike glycoprotein Severe acute respiratory syndrome coronavirus 0.142427438 1 Homo sapiens LEVO MFVFLVLLPLVSSQCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFD NPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVY SSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALEPLVDLPIGINITRFQT LLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRV QPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSF VIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPC NGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFL PFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQDVNCTEVPVAIHADQLTPTWRVYSTGS NVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPGSASSVASQSIIAYTMSLGAENSVAYSNNSIAIPTNFTI SVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGF NFSQILPDPSKPSKRSPIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAG TITSGWTFGAGPALQIPFPMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLSSTPSALGKLQDVVNQNAQALN TLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRV DFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNT FVSGNCDVVIGIVNNTVYDPLQPELDSFKEELDKYFKNHTSPDVDLGDISGINASVVNIQKEIDRLNEVAKNLNESLIDL QELGKYEQGSGYIPEAPRDGQAYVRKDGEWVLLSTFLGRSLEVLFQGPGHHHHHHHHSAWSHPQFEKGGGSGGGGSGGSA WSHPQFEK P0DTC2 Multivalent miniprotein inhibitor AHB2-2GS-SB175 synthetic construct 0.017565787 1 Escherichia coli LEVO ELEEQVMHVLDQVSELAHELLHKLTGEELERAAYFNWWATEMMLELIKSDDEREIREIEEEARRILEHLEELARKGGSEA LEELEKALRELKKSTDELERSTEELEKNPSEDALVENNRLIVENNKIIVEVLRIIAKVLKLEHHHHHH singleParticle particle 8.0 ETHANE FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 2.7 0.5 2.5 GATAN K3 (6k x 4k) 60.0 1
cryoSPARC ab initio
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