2022-11-16 REL RCSB RCSB RCSB 2022-03-01 2022-10-12 2022-10-12 2022-11-16 National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) United States Mouse retromer (VPS26/VPS35/VPS29) dimer of heterotrimers Kendall AK Jackson LP Kendall AK Chandra M Xie B Wan W Jackson LP Improved mammalian retromer cryo-EM structures reveal a new assembly interface. J.Biol.Chem. US 298 102523 102523 2022 36174678 doi:10.1016/j.jbc.2022.102523 1083-351X 0071 JBCHA3 EMD-26342 associated EM volume EMD-26343 other EM volume EMD-26341 other EM volume EMD-26340 other EM volume EMD-26345 other EM volume Mouse retromer (VPS26/VPS35/VPS29) dimer of heterotrimers Mouse retromer (VPS26/VPS35/VPS29) dimer of heterotrimers 0 1 2 3 Mus musculus Escherichia coli Vacuolar protein sorting-associated protein 35 Mus musculus LEVO MPTTQQSPQD EQEKLLDEAI QAVKVQSFQM KRCLDKNKLM DALKHASNML GELRTSMLSP KSYYELYMA ISDELHYLEV YLTDEFAKGR KVADLYELVQ YAGNIIPRLY LLITVGVVYV K SFPQSRKD ILKDLVEMCR GVQHPLRGLF LRNYLLQCTR NILPDEGEPT DEETTGDISD SM DFVLLNF AEMNKLWVRM QHQGHSRDRE KRERERQELR ILVGTNLVRL SQLEGVNVER YKQ IVLTGI LEQVVNCRDA LAQEYLMECI IQVFPDEFHL QTLNPFLRAC AELHQNVNVK NIII ALIDR LALFAHREDG PGIPAEIKLF DIFSQQVATV IQSRQDMPSE DVVSLQVSLI NLAMK CYPD RVDYVDKVLE TTVEIFNKLN LEHIATSSAV SKELTRLLKI PVDTYNNILT VLKLKH FHP LFEYFDYESR KSMSCYVLSN VLDYNTEIVS QDQVDSIMNL VSTLIQDQPD QPVEDPD PE DFADEQSLVG RFIHLLRSDD PDQQYLILNT ARKHFGAGGN QRIRFTLPPL VFAAYQLA F RYKENSQMDD KWEKKCQKIF SFAHQTISAL IKAELAELPL RLFLQGALAA GEIGFENHE TVAYEFMSQA FSLYEDEISD SKAQLAAITL IIGTFERMKC FSEENHEPLR TQCALAASKL LKKPDQGRA VSTCAHLFWS GRNTDKNGEE LHGGKRVMEC LKKALKIANQ CMDPSLQVQL F IEILNRYI YFYEKENDAV TIQVLNQLIQ KIREDLPNLE SSEETEQINK HFHNTLEHLR SR RESPESE GPIYEGLIL Vacuolar protein sorting-associated protein 26A Mus musculus LEVO MSFLGGFFGP ICEIDVALND GETRKMAEMK TEDGKVEKHY LFYDGESVSG KVNLAFKQPG KRLEHQGIR IEFVGQIELF NDKSNTHEFV NLVKELALPG ELTQSRSYDF EFMQVEKPYE S YIGANVRL RYFLKVTIVR RLTDLVKEYD LIVHQLATYP DVNNSIKMEV GIEDCLHIEF EY NKSKYHL KDVIVGKIYF LLVRIKIQHM ELQLIKKEIT GIGPSTTTET ETIAKYEIMD GAP VKGESI PIRLFLAGYD PTPTMRDVNK KFSVRYFLNL VLVDEEDRRY FKQQEIILWR KAPE KLRKQ RTNFHQRFES PDSQASAEQP EM vacuolar protein sorting-associated protein 29 Mus musculus LEVO MLVLVLGDLH IPHRCNSLPA KFKKLLVPGK IQHILCTGNL CTKESYDYLK TLAGDVHIVR GDFDENLNY PEQKVVTVGQ FKIGLIHGHQ VIPWGDMASL ALLQRQFDVD ILISGHTHKF E AFEHENKF YINPGSATGA YNALET singleParticle particle 8.0 ETHANE FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 0.7000000000000001 2.6 GATAN K2 SUMMIT (4k x 4k) 69.0 1 EMD-21117 7.0 FSC 0.143 CUT-OFF 70214 MAXIMUM LIKELIHOOD MAXIMUM LIKELIHOOD emd_26342.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 320 320 320 0 0 0 320 320 320 350.71997 350.71997 350.71997 90.0 90.0 90.0 X Y Z -0.008194809 0.03473376 0.00012336456 0.0011690154 1.096 1.096 1.096 0.0078 AUTHOR dimer emd_26342_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 320 320 320 0 0 0 320 320 320 350.71997 350.71997 350.71997 90.0 90.0 90.0 X Y Z -0.008076028 0.028570333 6.5353335e-05 0.0013306887 1.096 1.096 1.096 AUTHOR dimer half map 1 emd_26342_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 320 320 320 0 0 0 320 320 320 350.71997 350.71997 350.71997 90.0 90.0 90.0 X Y Z -0.0073557585 0.029683847 6.7780515e-05 0.0013326759 1.096 1.096 1.096 AUTHOR dimer half map 2