REL PDBe PDBe PDBe 2013-11-26 2013-12-18 2014-01-22 2016-02-17 Structure of the mammalian oligosaccharyl-transferase complex in the native ER protein translocon Pfeffer S Dudek J Gogala M Schorr S Linxweiler J Lang S Becker T Beckmann R Zimmermann F Co-translational protein translocation, N-Glycosylation Gogala M Becker T Beatrix B Barrio-Garcia C Berninghausen O Beckmann R Zimmermann R Foerster F Structure of the mammalian oligosaccharyl-transferase complex in the native ER protein translocon. NAT.COMMUN. 5 3072 3072 2014 24407213 doi:10.1038/ncomms4072 Canis familiaris Sec61, OST and TRAP bound to a translocating wheat germ 80S ribosome Canis familiaris Sec61, OST and TRAP bound to a translocating wheat germ 80S ribosome One 80S ribosome binds one Sec61, one OST and one TRAP 4 Triticum aestivum 80S ribosome
Data-subset resulted from computational sorting
false Triticum aestivum Wheat Germ ribosome-eukaryote: ALL Sec61 Canis lupus familiaris Dog false Oligosaccharyltransferase Canis lupus familiaris Dog false Translocon-Associated Protein omplex Canis lupus familiaris Dog false singleParticle particle 7.6
30 mM Hepes/KOH 7.6, 10 mM Mg(OAc)2, 180 mM KOAC/HAc pH 7.6, 0.3 % Digitonin, 1 mM DTT
Quantifoil grids pre-coated with 2 nm carbon on top
 ETHANE 95 FEI VITROBOT MARK IV Blot for 3 seconds before plunging FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 200 2.7 1.3 4.0 148721.0 FEI TITAN KRIOS AUTOGRID HOLDER 2011-07-17 TVIPS TEMCAM-F416 (4k x 4k) 6119 25 16.
The particles were selected using SIGNATURE, classified using MAPPOS and processed with SPIDER
On 3D-volume (SPIDER)
 C1 9.3 OTHER SPIDER, Signature, MAPPOS
This datasubset resulted from computational sorting.
15705 emd_2523.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 600 600 600 -300 -300 -299 600 600 600 742.44006 742.44006 742.44006 90.0 90.0 90.0 Y X Z -0.41137141 0.9818064 0.00244991 0.03538019 1.2374 1.2374 1.2374 0.01 AUTHOR Reconstruction was masked
::::EMDATABANK.org::::EMD-2523::::
 2WWB FLEXIBLE FIT Chimera, Coot, MDFF REAL