2024-10-23 REL RCSB RCSB RCSB 2021-10-04 2022-03-16 2022-03-16 2024-10-23 National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID) U19 AI142790 United States CryoEM structure of Venezuelan Equine Encephalitis virus (VEEV) TC-83 strain VLP Binshtein E Crowe JE VLP, VEEV, viral protein, VIRUS Kafai NM Williamson LE Binshtein E Sukupolvi-Petty S Gardner CL Liu J Mackin S Kim AS Kose N Carnahan RH Jung A Droit L Reed DS Handley SA Klimstra WB Crowe JE Diamond MS Neutralizing antibodies protect mice against Venezuelan equine encephalitis virus aerosol challenge. J.Exp.Med. US 219 2022 35297953 doi:10.1084/jem.20212532 1540-9538 0774 JEMEAV EMD-25103 other EM volume
VEEV vlp with Fab 63
 7sfu FULLOVERLAP Venezuelan equine encephalitis virus (strain TC-83) Venezuelan equine encephalitis virus (strain TC-83) 0 1 2 3 Venezuelan equine encephalitis virus (strain TC-83) VIRUS-LIKE PARTICLE OTHER true true Spike glycoprotein E1 Venezuelan equine encephalitis virus (strain TC-83) TC-83 0.047952065999999995 4 Homo sapiens LEVO YEHATTMPSQAGISYNTIVNRAGYAPLPISITPTKIKLIPTVNLEYVTCHYKTGMDSPAIKCCGSQECTPTYRPDEQCKV FTGVYPFMWGGAYCFCDTENTQVSKAYVMKSDDCLADHAEAYKAHTASVQAFLNITVGEHSIVTTVYVNGETPVNFNGVK ITAGPLSTAWTPFDRKIVQYAGEIYNYDFPEYGAGQPGAFGDIQSRTVSSSDLYANTNLVLQRPKAGAIHVPYTQAPSGF EQWKKDKAPSLKFTAPFGCEIYTNPIRAENCAVGSIPLAFDIPDALFTRVSETPTLSAAECTLNECVYSSDFGGIATVKY SASKSGKCAVHVPSGTATLKEAAVELTEQGSATIHFSTANIHPEFRLQICTSYVTCKGDCHPPKDHIVTHPQYHAQTFTA AVSKTAWTWLTSLLGGSAVIIIIGLVLATIVAMYVLTNQKHN P05674 Spike glycoprotein E2 Venezuelan equine encephalitis virus (strain TC-83) TC-83 0.047113746 4 Homo sapiens LEVO STEELFNEYKLTRPYMARCIRCAVGSCHSPIAIEAVKSDGHDGYVRLQTSSQYGLDSSGNLKGRTMRYDMHGTIKEIPLH QVSLYTSRPCHIVDGHGYFLLARCPAGDSITMEFKKDSVRHSCSVPYEVKFNPVGRELYTHPPEHGVEQACQVYAHDAQN RGAYVEMHLPGSEVDSSLVSLSGSSVTVTPPDGTSALVECECGGTKISETINKTKQFSQCTKKEQCRAYRLQNDKWVYNS DKLPKAAGATLKGKLHVPFLLADGKCTVPLAPEPMITFGFRSVSLKLHPKNPTYLITRQLADEPHYTHELISEPAVRNFT VTEKGWEFVWGNHPPKRFWAQETAPGNPHGLPHEVITHYYHRYPMSTILGLSICAAIATVSVAASTWLFCRSRVACLTPY RLTPNARIPFCLAVLCCARTARA P05674 Capsid protein Venezuelan equine encephalitis virus (strain TC-83) TC-83 0.018195839999999998 4 Homo sapiens LEVO KRQRMVMKLESDKTFPIMLEGKINGYACVVGGKLFRPMHVEGKIDNDVLAALKTKKASKYDLEYADVPQNMRADTFKYTH EKPQGYYSWHHGAVQYENGRFTVPKGVGAKGDSGRPILDNQGRVVAIVLGGVNEGSRTALSVVMWNEKGVTVKYTPENCE QW P05674 3.4.21.90 2-acetamido-2-deoxy-beta-D-glucopyranose 0.000221208 12 NAG singleParticle particle 7.5 COPPER 300 GLOW DISCHARGE AIR ETHANE 100 293.15 FEI VITROBOT MARK IV
Lacey Carbon.
FEI TITAN KRIOS OTHER BRIGHT FIELD FIELD EMISSION GUN 300 2.7 0.5 1.6 75000.0 FEI TITAN KRIOS AUTOGRID HOLDER NITROGEN FEI FALCON IV (4k x 4k) COUNTING 1 5939 8.14 40.05 1 13537 1 I 4.2 FSC 0.143 CUT-OFF RELION 3.1 7514 MAXIMUM LIKELIHOOD RELION 3.1 MAXIMUM LIKELIHOOD RELION 3.1 RELION 3.1 emd_25102.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 512 512 512 0 0 0 512 512 512 924.928 924.928 924.928 90.0 90.0 90.0 X Y Z -0.031853583 0.0626783 0.000074965086 0.005625205 1.8065 1.8065 1.8065 0.015 AUTHOR RIGID BODY FIT REAL emd_25102_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 512 512 512 0 0 0 512 512 512 924.928 924.928 924.928 90.0 90.0 90.0 X Y Z -0.016744385 0.029368646 0.00034074904 0.0031755634 1.8065 1.8065 1.8065 AUTHOR emd_25102_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 512 512 512 0 0 0 512 512 512 924.928 924.928 924.928 90.0 90.0 90.0 X Y Z -0.017084619 0.029891014 0.00032690956 0.0031680996 1.8065 1.8065 1.8065 AUTHOR