REL PDBe PDBe PDBe 2013-10-23 2013-10-30 2013-12-25 2016-02-17 Substrate Recruitment Pathways in the Yeast Exosome by Electron Microscopy Liu J-J Bratkowski MA Liu XQ Niu C-Y Ke AL Wang H-W exosome, RNA degradation route Liu JJ Bratkowski MA Liu X Niu CY Ke A Wang HW Visualization of distinct substrate-recruitment pathways in the yeast exosome by EM. NAT.STRUCT.MOL.BIOL. 21 95 102 2014 24336220 doi:10.1038/nsmb.2736 Rrp44-Exosome incubated with RNA10 Rrp44-Exosome incubated with RNA10 11 0.350 Mass spectrum Rrp44 Saccharomyces cerevisiae Baker's yeast cytoplasm 0.11 1 false Rrp43 Saccharomyces cerevisiae Baker's yeast cytoplasm 0.04 1 false Rrp4 Saccharomyces cerevisiae Baker's yeast cytoplasm 0.04 1 false Csl4 Saccharomyces cerevisiae yeast cytoplasm 0.03 1 false Rrp45 Saccharomyces cerevisiae Baker's yeast cytoplasm 0.03 1 false Rrp46-TAP Saccharomyces cerevisiae Baker's yeast cytoplasm 0.03 1 true Rrp41 Saccharomyces cerevisiae Baker's yeast cytoplasm 0.03 1 false Rrp42 Saccharomyces cerevisiae Baker's yeast cytoplasm 0.03 1 false Mtr3 Saccharomyces cerevisiae Baker's yeast cytoplasm 0.03 1 false Rrp40 Saccharomyces cerevisiae Baker's yeast cytoplasm 0.03 1 false RNA10 synthetic construct 0.0026 OTHER SINGLE STRANDED true singleParticle particle 1 8.0
150mM NaCl, 50mM Tris-HCL,1mM DTT
 NEGATIVE
All samples were diluted at a final concentration of ~80 nM of the exosome in the non-digestive buffer and negatively stained in 2% (w/v) uranyl acetate solution following the standard deep stain procedure on holey-carbon coated EM copper grids covered with a thin layer of continuous carbon
300 mesh continus carbon
 NONE OTHER FEI TECNAI F20 FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 200 OTHER 2012-10-10 GENERIC GATAN (4k x 4k) 300 30 C1 25.0 FSC 0.5 CUT-OFF Spider 26454
SPIDER: theta 90 degrees, phi 359.9 degrees
 emd_2492.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 90 90 90 0 0 0 90 90 90 396.0 396.0 396.0 90.0 90.0 90.0 X Y Z -10.315519330000001 17.884569169999999 0.0 0.99999928 4.4 4.4 4.4 4.68 EMDB Exosome incubated with ssRNA( 10 nucleotides in length)
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