<emd xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" emdb_id="EMD-2414" version="3.0.1.1" xsi:schemaLocation="https://github.com/emdb-empiar/emdb-schemas/blob/master/v3/v3_0_1_1/emdb_relaxed.xsd">
   <admin>
      <current_status>
         <code>REL</code>
         <processing_site>PDBe</processing_site>
      </current_status>
      <sites>
         <deposition>PDBe</deposition>
         <last_processing>PDBe</last_processing>
      </sites>
      <key_dates>
         <deposition>2013-07-09</deposition>
         <header_release>2013-07-17</header_release>
         <map_release>2013-07-17</map_release>
         <update>2014-03-26</update>
      </key_dates>
      <title>Signaling in Chemoreceptor Arrays Through Mobility Control of Kinase Domains - kinase activity state locked off - tsr mutant M222R</title>
      <authors_list>
         <author>Briegel A</author>
         <author>Ames P</author>
         <author>Gumbart JC</author>
         <author>Oikonomou CM</author>
         <author>Parkinson JS</author>
         <author>Jensen GJ</author>
      </authors_list>
      <keywords>chemotaxis, E.coli, CheA</keywords>
   </admin>
   <crossreferences>
      <citation_list>
         <primary_citation>
            <journal_citation published="true">
               <author order="1">Briegel A</author>
               <author order="2">Ames P</author>
               <author order="3">Gumbart JC</author>
               <author order="4">Oikonomou CM</author>
               <author order="5">Parkinson JS</author>
               <author order="6">Jensen GJ</author>
               <title>The mobility of two kinase domains in the Escherichia coli chemoreceptor array varies with signalling state.</title>
               <journal>MOL.MICROBIOL.</journal>
               <volume>89</volume>
               <first_page>831</first_page>
               <last_page>841</last_page>
               <year>2013</year>
               <external_references type="PUBMED">23802570</external_references>
               <external_references type="DOI">doi:10.1111/mmi.12309</external_references>
            </journal_citation>
         </primary_citation>
      </citation_list>
   </crossreferences>
   <sample>
      <name>chemoreceptor array with receptor variant tsr M222R</name>
      <supramolecule_list>
         <sample_supramolecule supramolecule_id="1000">
            <name>chemoreceptor array with receptor variant tsr M222R</name>
            <number_unique_components>3</number_unique_components>
         </sample_supramolecule>
      </supramolecule_list>
      <macromolecule_list>
         <protein_or_peptide macromolecule_id="1">
            <name>tsr M222R</name>
            <natural_source database="NCBI">
               <organism ncbi="562">Escherichia coli</organism>
            </natural_source>
            <recombinant_exp_flag>true</recombinant_exp_flag>
            <recombinant_expression database="NCBI">
               <recombinant_organism ncbi="562">Escherichia coli</recombinant_organism>
            </recombinant_expression>
            <sequence>
               </sequence>
         </protein_or_peptide>
         <protein_or_peptide macromolecule_id="2">
            <name>CheW</name>
            <natural_source database="NCBI">
               <organism ncbi="562">Escherichia coli</organism>
            </natural_source>
            <recombinant_exp_flag>false</recombinant_exp_flag>
            <recombinant_expression database="NCBI">
               </recombinant_expression>
            <sequence>
               </sequence>
         </protein_or_peptide>
         <protein_or_peptide macromolecule_id="3">
            <name>CheA</name>
            <natural_source database="NCBI">
               <organism ncbi="562">Escherichia coli</organism>
            </natural_source>
            <oligomeric_state>dimer</oligomeric_state>
            <recombinant_exp_flag>false</recombinant_exp_flag>
            <recombinant_expression database="NCBI">
               </recombinant_expression>
            <sequence>
               </sequence>
         </protein_or_peptide>
      </macromolecule_list>
   </sample>
   <structure_determination_list>
      <structure_determination structure_determination_id="1">
         <method>subtomogramAveraging</method>
         <aggregation_state>cell</aggregation_state>
         <specimen_preparation_list>
            <subtomogram_averaging_preparation preparation_id="1">
               <buffer>
                  <details>Tryptone Broth (10 g/L Tryptone, 5 g/L NaCl). Cells were incubated with penicillin for 1 hour prior to freezing.</details>
               </buffer>
               <grid>
                  <details>R 2/2 copper/rhodium grids, glow discharged</details>
               </grid>
               <vitrification>
                  <cryogen_name>ETHANE-PROPANE MIXTURE</cryogen_name>
                  <chamber_humidity units="percentage">100</chamber_humidity>
                  <instrument>FEI VITROBOT MARK III</instrument>
               </vitrification>
            </subtomogram_averaging_preparation>
         </specimen_preparation_list>
         <microscopy_list>
            <subtomogram_averaging_microscopy microscopy_id="1">
               <microscope>FEI POLARA 300</microscope>
               <illumination_mode>FLOOD BEAM</illumination_mode>
               <imaging_mode>BRIGHT FIELD</imaging_mode>
               <electron_source>FIELD EMISSION GUN</electron_source>
               <acceleration_voltage units="kV">300</acceleration_voltage>
               <nominal_cs units="mm">2.2</nominal_cs>
               <nominal_defocus_min units="&#181;m">10.0</nominal_defocus_min>
               <nominal_magnification>34000.0</nominal_magnification>
               <specimen_holder_model>OTHER</specimen_holder_model>
               <specialist_optics>
                  <energy_filter>
                     <name>FEI</name>
                     <lower_energy_threshold units="eV">0.0</lower_energy_threshold>
                     <upper_energy_threshold units="eV">20.0</upper_energy_threshold>
                  </energy_filter>
               </specialist_optics>
               <date>2011-11-01</date>
               <image_recording_list>
                  <image_recording>
                     <average_electron_dose_per_image units="e/&#8491;^2">150</average_electron_dose_per_image>
                  </image_recording>
               </image_recording_list>
               <tilt_series>
                  <axis1>
                     <min_angle units="deg">-66.93</min_angle>
                     <max_angle units="deg">59.52</max_angle>
                  </axis1>
               </tilt_series>
            </subtomogram_averaging_microscopy>
         </microscopy_list>
         <subtomogram_averaging_processing image_processing_id="1">
            <details>CTF-corrected. Average number of tilts used in the 3D reconstructions: 128. Average tomographic tilt angle increment: 1.</details>
            <final_reconstruction>
               <applied_symmetry>
                  <point_group>C3</point_group>
               </applied_symmetry>
               <resolution res_type="BY AUTHOR" units="&#8491;">30.0</resolution>
               <resolution_method>OTHER</resolution_method>
               <software_list>
                  <software>
                     <name>IMOD, tomo3D</name>
                  </software>
               </software_list>
               <number_subtomograms_used>96</number_subtomograms_used>
            </final_reconstruction>
            <ctf_correction>
               <details>IMOD</details>
            </ctf_correction>
         </subtomogram_averaging_processing>
      </structure_determination>
   </structure_determination_list>
   <map format="CCP4" size_kbytes="845">
      <file>emd_2414.map.gz</file>
      <symmetry>
         <space_group>1</space_group>
      </symmetry>
      <data_type>IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES)</data_type>
      <dimensions>
         <col>60</col>
         <row>60</row>
         <sec>60</sec>
      </dimensions>
      <origin>
         <col>0</col>
         <row>0</row>
         <sec>0</sec>
      </origin>
      <spacing>
         <x>60</x>
         <y>60</y>
         <z>60</z>
      </spacing>
      <cell>
         <a units="&#8491;">386.4</a>
         <b units="&#8491;">386.4</b>
         <c units="&#8491;">386.4</c>
         <alpha units="deg">90.0</alpha>
         <beta units="deg">90.0</beta>
         <gamma units="deg">90.0</gamma>
      </cell>
      <axis_order>
         <fast>X</fast>
         <medium>Y</medium>
         <slow>Z</slow>
      </axis_order>
      <statistics>
         <minimum>1.28919983</minimum>
         <maximum>4.03999996</maximum>
         <average>2.81754231</average>
         <std>0.32731485</std>
      </statistics>
      <pixel_spacing>
         <x units="&#8491;">6.44</x>
         <y units="&#8491;">6.44</y>
         <z units="&#8491;">6.44</z>
      </pixel_spacing>
      <contour_list>
         <contour primary="true">
            <level>3.05</level>
            <source>AUTHOR</source>
         </contour>
      </contour_list>
      <annotation_details>subvolume average of receptor array of tsr variant M222R</annotation_details>
      <details>::::EMDATABANK.org::::EMD-2414::::</details>
   </map>
</emd>