2021-09-01 REL RCSB RCSB RCSB 2021-05-28 2021-09-01 2021-09-01 2021-09-01 National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) R01GM080139 United States Classification of ribosome assembly intermediates Chen M Ludtke SJ Chen M Ludtke SJ Deep learning-based mixed-dimensional Gaussian mixture model for characterizing variability in cryo-EM. Nat.Methods US 18 930 936 2021 34326541 doi:10.1038/s41592-021-01220-5 1548-7105 EMD-24129 associated EM volume bL17-depleted large ribosomal subunit assembly intermediate bL17-depleted large ribosomal subunit assembly intermediate 0 Escherichia coli singleParticle particle 7.0 ETHANE FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 GATAN K2 SUMMIT (4k x 4k) 34.0 1 EMD-8452 6 FOURIER SPACE 8.0 OTHER
Classified by the location of particles in the conformational space. The particle count in the six classes are 16640, 23307, 1409, 3766, 10095, and 6701 correspondingly. The maps are filtered to 8A for display.
61918 PROJECTION MATCHING PROJECTION MATCHING EMAN 2.91 emd_24129.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 128 128 128 -64 -64 -64 128 128 128 335.36 335.36 335.36 90.0 90.0 90.0 X Y Z -8.184823 11.081097 7.0259594e-09 0.9999997 2.62 2.62 2.62 2.5 AUTHOR Classification of ribosome assembly intermediates. emd_24129_additional_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 128 128 128 -64 -64 -64 128 128 128 335.36 335.36 335.36 90.0 90.0 90.0 X Y Z -9.231271 15.361552 -4.375248e-09 0.99999976 2.62 2.62 2.62 AUTHOR Classification of ribosome assembly intermediates. Class 3. emd_24129_additional_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 128 128 128 -64 -64 -64 128 128 128 335.36 335.36 335.36 90.0 90.0 90.0 X Y Z -9.351235 13.862186 3.162809e-09 0.9999998 2.62 2.62 2.62 AUTHOR Classification of ribosome assembly intermediates. Class 0. emd_24129_additional_3.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 128 128 128 -64 -64 -64 128 128 128 335.36 335.36 335.36 90.0 90.0 90.0 X Y Z -8.117545 12.97736 1.4680264e-09 0.9999998 2.62 2.62 2.62 AUTHOR Classification of ribosome assembly intermediates. Class 5. emd_24129_additional_4.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 128 128 128 -64 -64 -64 128 128 128 335.36 335.36 335.36 90.0 90.0 90.0 X Y Z -8.83625 12.635991 -1.3589794e-09 0.99999976 2.62 2.62 2.62 AUTHOR Classification of ribosome assembly intermediates. Class 1. emd_24129_additional_5.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 128 128 128 -64 -64 -64 128 128 128 335.36 335.36 335.36 90.0 90.0 90.0 X Y Z -9.582778 14.295932 5.049231e-09 0.99999976 2.62 2.62 2.62 AUTHOR Classification of ribosome assembly intermediates. Class 4. emd_24129_additional_6.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 128 128 128 -64 -64 -64 128 128 128 335.36 335.36 335.36 90.0 90.0 90.0 X Y Z -8.184823 11.081097 7.0259594e-09 0.9999997 2.62 2.62 2.62 AUTHOR Classification of ribosome assembly intermediates. Class 2.