2025-05-28 REL RCSB INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY EXPERIMENTAL_SUMMARY em_admin em_software _em_admin.last_update _em_software.name DATABASE_REFERENCES citation _citation.journal_volume _citation.page_first _citation.page_last STRUCTURE_SUMMARY chem_comp_atom chem_comp_bond em_admin pdbx_entry_details pdbx_modification_feature pdbx_struct_oper_list _em_admin.last_update _pdbx_entry_details.has_protein_modification _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.type DATA_COLLECTION em_admin em_software _em_admin.last_update _em_software.name RCSB RCSB 2021-05-27 2021-10-13 2021-10-13 2025-05-28 National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID) HHSN272201700060C United States CryoEM structure of Venezuelan equine encephalitis virus VLP Basore K Nelson CA Fremont DH viral envelope, encephalitic alphavirus, VLP, Structural Genomics, Center for Structural Genomics of Infectious Diseases, CSGID, VIRUS LIKE PARTICLE, VEEV Basore K Ma H Kafai NM Mackin S Kim AS Nelson CA Diamond MS Fremont DH Structure of Venezuelan equine encephalitis virus in complex with the LDLRAD3 receptor. Nature UK 598 672 676 2021 34646020 doi:10.1038/s41586-021-03963-9 1476-4687 0006 NATUAS EMD-24394 other EM volume
CryoEM structure of LDLRAD3 domains 1 and 2
 7n1i FULLOVERLAP Venezuelan equine encephalitis virus Venezuelan equine encephalitis virus 0 1 2 3
Virus like particle produce in HEK293F cells by recombinant expression of structural proteins.
Venezuelan equine encephalitis virus TC-83 Mosquito VIRUS-LIKE PARTICLE STRAIN true true E1 envelope glycoprotein Venezuelan equine encephalitis virus 0.047952065999999995 4 Homo sapiens LEVO YEHATTMPSQAGISYNTIVNRAGYAPLPISITPTKIKLIPTVNLEYVTCHYKTGMDSPAIKCCGSQECTPTYRPDEQCKV FTGVYPFMWGGAYCFCDTENTQVSKAYVMKSDDCLADHAEAYKAHTASVQAFLNITVGEHSIVTTVYVNGETPVNFNGVK ITAGPLSTAWTPFDRKIVQYAGEIYNYDFPEYGAGQPGAFGDIQSRTVSSSDLYANTNLVLQRPKAGAIHVPYTQAPSGF EQWKKDKAPSLKFTAPFGCEIYTNPIRAENCAVGSIPLAFDIPDALFTRVSETPTLSAAECTLNECVYSSDFGGIATVKY SASKSGKCAVHVPSGTATLKEAAVELTEQGSATIHFSTANIHPEFRLQICTSYVTCKGDCHPPKDHIVTHPQYHAQTFTA AVSKTAWTWLTSLLGGSAVIIIIGLVLATIVAMYVLTNQKHN A0A0C4MX98 E2 envelope glycoprotein Venezuelan equine encephalitis virus 0.047113746 4 Homo sapiens LEVO STEELFNEYKLTRPYMARCIRCAVGSCHSPIAIEAVKSDGHDGYVRLQTSSQYGLDSSGNLKGRTMRYDMHGTIKEIPLH QVSLYTSRPCHIVDGHGYFLLARCPAGDSITMEFKKDSVRHSCSVPYEVKFNPVGRELYTHPPEHGVEQACQVYAHDAQN RGAYVEMHLPGSEVDSSLVSLSGSSVTVTPPDGTSALVECECGGTKISETINKTKQFSQCTKKEQCRAYRLQNDKWVYNS DKLPKAAGATLKGKLHVPFLLADGKCTVPLAPEPMITFGFRSVSLKLHPKNPTYLITRQLADEPHYTHELISEPAVRNFT VTEKGWEFVWGNHPPKRFWAQETAPGNPHGLPHEVITHYYHRYPMSTILGLSICAAIATVSVAASTWLFCRSRVACLTPY RLTPNARIPFCLAVLCCARTARA A0A0C4MX98 Capsid Venezuelan equine encephalitis virus 0.018195839999999998 4 Homo sapiens LEVO KRQRMVMKLESDKTFPIMLEGKINGYACVVGGKLFRPMHVEGKIDNDVLAALKTKKASKYDLEYADVPQNMRADTFKYTH EKPQGYYSWHHGAVQYENGRFTVPKGVGAKGDSGRPILDNQGRVVAIVLGGVNEGSRTALSVVMWNEKGVTVKYTPENCE QW A0A0C4MX98 2-acetamido-2-deoxy-beta-D-glucopyranose 0.000221208 8 NAG singleParticle particle 7.4 ETHANE FEI TITAN KRIOS SPOT SCAN BRIGHT FIELD FIELD EMISSION GUN 300 GATAN K2 SUMMIT (4k x 4k) 35.0 1 19516 PHASE FLIPPING ONLY 3J0C I 4.2 FSC 0.143 CUT-OFF RELION 3.1 7993 MAXIMUM LIKELIHOOD MAXIMUM LIKELIHOOD emd_24117.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 700 700 700 -349 -349 -349 700 700 700 770.0 770.0 770.0 90.0 90.0 90.0 X Y Z -0.030688863 1.9192786 0.010417176 0.071753666 1.1 1.1 1.1 0.1 AUTHOR Sharpened cryo-electron microscopy map of Venezuelan equine encephalitis VLP emd_24117_additional_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 700 700 700 -349 -349 -349 700 700 700 770.0 770.0 770.0 90.0 90.0 90.0 X Y Z -0.0028917918 0.013852683 0.00045487596 0.0022084215 1.1 1.1 1.1 AUTHOR Unsharpened cryo-electron microscopy map of Venezuelan equine encephalitis VLP emd_24117_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 700 700 700 -349 -349 -349 700 700 700 770.0 770.0 770.0 90.0 90.0 90.0 X Y Z -0.011770094 0.019282747 0.0004531168 0.0026838295 1.1 1.1 1.1 AUTHOR Unsharpened half map 1. emd_24117_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 700 700 700 -349 -349 -349 700 700 700 770.0 770.0 770.0 90.0 90.0 90.0 X Y Z -0.016251186 0.019565871 0.00045668607 0.002694726 1.1 1.1 1.1 AUTHOR Unsharpened half map 2.