2025-05-28 REL RCSB INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY EXPERIMENTAL_SUMMARY em_admin em_software _em_admin.last_update _em_software.name DATABASE_REFERENCES citation citation_author _citation.journal_abbrev _citation.journal_id_CSD _citation.journal_id_ISSN _citation.journal_volume _citation.page_first _citation.page_last _citation.pdbx_database_id_DOI _citation.pdbx_database_id_PubMed _citation.title _citation.year STRUCTURE_SUMMARY chem_comp_atom chem_comp_bond em_admin pdbx_entry_details pdbx_modification_feature _em_admin.last_update _pdbx_entry_details.has_protein_modification DATA_COLLECTION em_admin em_software _em_admin.last_update _em_software.name RCSB RCSB 2021-03-26 2022-08-03 2022-08-03 2025-05-28 American Heart Association 20POST35210394 United States National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) R35GM134896 United States Full length alpha1 Glycine receptor in presence of 32uM Tetrahydrocannabinol Kumar A Chakrapani S Ions Ligands Receptors, Glycine receptor Recombinant Proteins, MEMBRANE PROTEIN Kumar A Kindig K Rao S Zaki AM Basak S Sansom MSP Biggin PC Chakrapani S Structural basis for cannabinoid-induced potentiation of alpha1-glycine receptors in lipid nanodiscs. Nat Commun UK 13 4862 4862 2022 35982060 doi:10.1038/s41467-022-32594-5 2041-1723 Kumar A Basak S Rao S Gicheru Y Mayer ML Sansom MSP Chakrapani S Mechanisms of activation and desensitization of full-length glycine receptor in lipid nanodiscs. Nat Commun UK 11 3752 2020 32719334 doi:10.1038/s41467-020-17364-5 2041-1723 7m6m FULLOVERLAP Glycine receptor subunit alpha Z1 Glycine receptor subunit alpha Z1 0 1 Danio rerio 250 Glycine receptor subunit alphaZ1 Danio rerio 0.050821711 5 Spodoptera frugiperda LEVO MFALGIYLWETIVFFSLAASQQAAARKAASPMPPSEFLDKLMGKVSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTM DYRVNIFLRQQWNDPRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRISKNGNVLYSIRITLVL ACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWDEKGAVQVADGLTLPQFILKEEKDLRYCTKHYNTGKFTCIEARFHL ERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFS ALLEYAAVNFIARQHKELLRFQRRRRHLKEDEAGDGRFSFAAYGMGPACLQAKDGMAIKGNNNNAPTSTNPPEKTVEEMR KLFISRAKRIDTVSRVAFPLVFLIFNIFYWITYKIIRSEDIHKQ O93430 (6aR,10aR)-6,6,9-trimethyl-3-pentyl-6a,7,8,10a-tetrahydro-6H-benzo[c]chromen-1-ol 0.000314462 5 TCI singleParticle particle 0.1 8.0 50.0 4H11NO3 Tris 200.0 NaCl Sodium Chloride ETHANE 100 4 FEI VITROBOT MARK IV
3.5 ul of 0.1 mg/ml protein solution was applied on a grid in the Vitrobot MkIV chamber set to 100% RH at 4 degC for 30s and then blotted for 2 s and plunged.
Full length Zebrafish GlyR alpha1 homopentamer reconsituted in Nanodisc
 FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 100.0 2.7 1.0 2.5 130000.0 FEI TITAN KRIOS AUTOGRID HOLDER NITROGEN GIF Bioquantum 20 GATAN K3 BIOQUANTUM (6k x 4k) SUPER-RESOLUTION 8 9700 9.0 40.0 1 PHASE FLIPPING AND AMPLITUDE CORRECTION 6UBS C5 3.09 FSC 0.143 CUT-OFF RELION 3.1 25539 ANGULAR RECONSTITUTION ANGULAR RECONSTITUTION emd_23700.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 300 300 300 0 0 0 300 300 300 317.99997 317.99997 317.99997 90.0 90.0 90.0 X Y Z -0.0011166513 2.003801 0.0026874833 0.041466072 1.06 1.06 1.06 0.016 AUTHOR Primary Map emd_23700_additional_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 300 300 300 0 0 0 300 300 300 317.99997 317.99997 317.99997 90.0 90.0 90.0 X Y Z -0.0317567 0.08416483 0.00025156836 0.0024209265 1.06 1.06 1.06 AUTHOR postprocessing maps generated ysing half maps and softmask in relion 3.1 emd_23700_additional_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 300 300 300 0 0 0 300 300 300 317.99997 317.99997 317.99997 90.0 90.0 90.0 X Y Z -0.015588957 0.055750992 0.00021074747 0.0019998772 1.06 1.06 1.06 AUTHOR maps generated in the final rounds of 3D-autorefinement in relion 3.1 emd_23700_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 300 300 300 0 0 0 300 300 300 317.99997 317.99997 317.99997 90.0 90.0 90.0 X Y Z -0.018366732 0.056517456 0.00023703036 0.002107417 1.06 1.06 1.06 AUTHOR maps reconstructed independently each using half of the experimental data emd_23700_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 300 300 300 0 0 0 300 300 300 317.99997 317.99997 317.99997 90.0 90.0 90.0 X Y Z -0.017488565 0.058470972 0.00026610636 0.0021176483 1.06 1.06 1.06 AUTHOR maps reconstructed independently each using half of the experimental data