REL PDBe PDBe PDBe 2013-04-23 2013-05-29 2013-06-05 2013-06-05 Negative-staining electron microscopy structure of the Agrobacterium tumefaciens T-complex, composed of the protein VirE2 coating single-stranded DNA. Abu-Arish A Frenkiel-Krispin D Fricke T Tzfira T Citovsky V Wolf SG Elbaum M T-complex, agrobacterium, helical reconstruction, negative staining Abu-Arish A Frenkiel-Krispin D Fricke T Tzfira T Citovsky V Wolf SG Elbaum M Three-dimensional reconstruction of Agrobacterium VirE2 protein with single-stranded DNA. J.BIOL.CHEM. 279 25359 25363 2004 15054095 doi:10.1074/jbc.M401804200 Negative-staining recosntruction of the Agrobacterium T-complex Negative-staining recosntruction of the Agrobacterium T-complex
Helical assembly
Helical 2 Agrobacterium tumefaciens VirE2 protein Agrobacterium fabrum str. C58 0.058
Negative-staining EM reconstruction of the Agrobacterium T-complex
Helical true Escherichia coli BL21(DE3) short oligomeric 26mer DNA Agrobacterium fabrum str. C58 DNA DOUBLE HELIX true helical helicalArray NEGATIVE
1.5% Uranyl acetate staining
Carbon coated grids
 NONE OTHER
Protein was mixed with M13 circular single-stranded DNA.
 FEI TECNAI F20 FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 200 2 0.6 2.7 OTHER 2004-01-01 GENERIC TVIPS
Helical reconstruction using IHRSR
12.11 84.7 OTHER 25.0 Bsoft, Spider, IHRSR
Phase-flipping
 emd_2368.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 80 80 80 0 0 0 80 80 80 256.0 256.0 256.0 90.0 90.0 90.0 X Y Z -0.00776185 0.04504754 0.00569092 0.0096853 3.2 3.2 3.2 0.0175 AUTHOR Negative-staining EM reconstruction of the Agrobacterium T-complex
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emd_2368.jpg