2024-12-25 REL RCSB RCSB RCSB 2021-03-17 2021-05-12 2021-05-12 2024-12-25 Howard Hughes Medical Institute (HHMI) David Agard United States National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) R01 GM031627 United States National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) R35 GM118099 United States National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) P01 GM105537 United States National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) P41 GM103533 United States National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) GM083960 United States National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) GM109824 United States National Science Foundation (NSF, United States) 1144247 United States National Institutes of Health/Office of the Director 1S10OD020054 United States National Institutes of Health/Office of the Director 1S10OD021741 United States National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) R01 GM124149 United States National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) P30 GM124169 United States Department of Energy (DOE, United States) DE-AC02-05CH11231 United States Engineered disulfide cross-linked closed conformation of the Yeast gamma-TuRC(SS) Brilot AF Lyon AS microtubule nucleation, CELL CYCLE Brilot AF Lyon AS Zelter A Viswanath S Maxwell A MacCoss MJ Muller EG Sali A Davis TN Agard DA CM1-driven assembly and activation of yeast gamma-tubulin small complex underlies microtubule nucleation. Elife US 10 2021 33949948 doi:10.7554/eLife.65168 2050-084X EMD-23639 other EM volume EMD-23638 other EM volume EMD-23637 other EM volume EMD-23636 other EM volume 7m2w FULLOVERLAP Engineered disulfide cross-linked closed conformation of the Yeast gamma-TuRC(SS) Engineered disulfide cross-linked closed conformation of the Yeast gamma-TuRC(SS) 0 1 2 3 4 Saccharomyces cerevisiae Nucleus Spindle Pole Body Tubulin gamma chain Saccharomyces cerevisiae (strain ATCC 204508 / S288c) ATCC 204508 / S288c 0.05273334 4 Spodoptera frugiperda LEVO MGGEIITLQAGQCGNHVGKFLWSQLAKEHAIGTDGLSQLPDSSTERDDDTKPFFRENCRNKFTPRAIMMDSEPSVIADVE NTFRGFFDPRNTWVASDGASAGNSWANGYDIGTRNQDDILNKIDKEIDSTDNFEGFQLLHSVAGGTGSGLGSNLLEALCD RYPKKILTTYSVFPARSSEVVVQSYNTILALRRLIEDSDATVVFDNASLLNISGKVFRNPNIDLQHTNQLISTIISSVTN SIRFPSYMYSSMSSIYSTLIPSPELHFLSPSFTPFTSDYIHDDIAHKCHSSYDVMLDLLDPSNSLVSTAMNNPTYFNVYN TIIGNVEPRQISRAMTKLQQRIKFPSWSSSAMHVNIGRRSPYLPLQPNENEVSGMMLSNMSTVVNVFENACNTFDKVFAK GAFLNNYNVGDLFQSMQNVQDEFAESREVVQSLMEDYVAAEQDSYLDDVLVDDENMVGELEEDLDADGDHKLV P53378 Spindle pole body component SPC97 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) ATCC 204508 / S288c 0.09694059399999999 2 Spodoptera frugiperda LEVO MEIKEVDDRAELLRYTNNIPLLGKLVNHQPLWSTNPKLKSFSLEKISAPDQRRVQEALVVKDLLNVLIGLEGTYIRYFND YEPSDPETPIEFKIAKKMDPSFKTFSRRIVRYGKQYMILTRAYEKWSDTSFGMVLQRFAYEIRRFLEDVYLKTLVERLER DFNKVPNFSIRELEQIINETEVNKQMELLYNIYEEIFREIEERRTNQSSQEDFNNFMDSMKNESSLHLRLMVAFDTTVYP VPKGGAILKIFQQKILENLGDRSSVMFLKKLLNNISQDYCTMLYEWLTQGILNDPYQEFMTYDDLEGKTDNIFDTRDRAW DTQYFIRKDVLLRDCDSEEDKNLLFKMLRTGILLKVVRASLQIPTIPSNSSDITIQEINDFADLMEGSNLELYVDKCYSR ANEIFLKLFFQGYDLINVLKHLQQIFLGYQSGHNVLKFLTKNMGELTKHYRNDNNANYDKLLQNFELERQSENPNNLMRQ LLMIQFDTETLPQVLSHYLQIYPEVPENNSANDDSDPLMHANNFKNMNAILFDELSKERTGAYHGSNLELYTPKSAIYHL KFDINIPYPLNIIISRTCMIKYQIILRYQLVLQYHSRLLDETWMDLNKTPSWKYRGYSHTVKRRIVRATRVLHAKMNHFI KTIMEYFNQNVIDKEVYSLEKCYRNPTLAVAIQNELEGGLTNIMTNRCLSDLIPLQLQIFDIVYKFCKFIKSMRAKLCQL DPVLYEKHKSGMMKTLNEGYRTNNGGQEDVGYQEDAALELIQKLIEYISNASSIFRKCLINFTQELSTEKFDFYDSSSVD AAGIERVLYSIVPPRSASASSQR P38863 Spindle pole body component SPC98 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) ATCC 204508 / S288c 0.09833621099999999 2 Spodoptera frugiperda LEVO MELEPTLFGIIEALAPQLLSQSHLQTFVSDVVNLLRSSTKSATQLGPLIDFYKLQSLDSPETTIMWHKIEKFLDALFGIQ NTDDMVKYLSVFQSLLPSNYRAKIVQKSSGLNMENLANHEHLLSPVRAPSIYTEASFENMDRFSERRSMVSSPNRYVPSS TYSSVTLRQLSNPYYVNTIPEEDILKYVSYTLLATTSALFPFDHEQIQIPSKIPNFESGLLHLIFEAGLLYQSLGYKVEK FRMLNISPMKKALIIEISEELQNYTAFVNNLVSSGTVVSLKSLYREIYENIIRLRIYCRFTEHLEELSGDTFLIELNIFK SHGDLTIRKIATNLFNSMISLYYEYLMNWLTKGLLRATYGEFFIAENTDTNGTDDDFIYHIPIEFNQERVPAFIPKELAY KIFMIGKSYIFLEKYCKEVQWTNEFSKKYHVLYQSNSYRGISTNFFEIINDQYSEIVNHTNQILNQKFHYRDVVFALKNI LLMGKSDFMDALIEKANDILATPSDSLPNYKLTRVLQEAVQLSSLRHLMNSPRNSSVINGLDARVLDLGHGSVGWDVFTL DYILYPPLSLVLNVNRPFGRKEYLRIFNFLWRFKKNNYFYQKEMLKSNDIIRSFKKIRGYNPLIRDIINKLSRISILRTQ FQQFNSKMESYYLNCIIEENFKEMTRKLQRTENKSQNQFDLIRLNNGTIELNGILTPKAEVLTKSSSSKPQKHAIEKTLN IDELESVHNTFLTNILSHKLFATNTSEISVGDYSGQPYPTSLVLLLNSVYEFVKVYCNLNDIGYEIFIKMNLNDHEASNG LLGKFNTNLKEIVSQYKNFKDRLYIFRADLKNDGDEELFLLSKSLR P53540 Spindle pole body component 110 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) ATCC 204508 / S288c 0.025449555 4 Spodoptera frugiperda LEVO MDEASHLPNGSLKNMEFTPVGFIKSKRNTTQTQVVSPTKVPNANNGDENEGPVKKRQRRSIDDTIDSTRLFSEASQFDDS FPEIKANIPPSPRSGNVDKSRKRNLIDDLKKDVPMSQPLKEQEVREHQMKKERFDRALESKLLGKRHITYANSDISNKEL YINEIKSLKHEIKELRKEKNDTLNNYDTLEEETDDLKNRLQALEKELDAKNKIVNSRKVD P32380 GUANOSINE-5'-TRIPHOSPHATE 0.0005231799999999999 4 GTP helical helicalArray 7.5 40.0 HEPES-KOH 100.0 Potassium Chloride 2.0 Magnesium Chloride 1.0 EGTA 1.0 Oxidized Glutathione 0.5 GTP 2.5 Glycerol Quantifoil R1.2/1.3 COPPER CARBON HOLEY ARRAY GLOW DISCHARGE ETHANE 100 293 FEI VITROBOT MARK IV
Whatman #1 Filter papers used..
FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 70.0 2.7 0.6 0.5 2.0 2.5 47214.0 FEI TITAN KRIOS AUTOGRID HOLDER NITROGEN GATAN K2 SUMMIT (4k x 4k) SUPER-RESOLUTION 1 3024 12.0 72.0 1 4 0.1 0 C1 FOURIER SPACE 3.0 FSC 0.143 CUT-OFF cisTEM 1.0 Beta
Final reconstruction is on symmetry expanded particles.
148911 175500 EMAN2 e2helixboxer.py
Boxed approximately every 3 asymmetric units using a rise of 21 Angstroms, with a box size of 600 pixels (635.4A).
 NOT APPLICABLE cisTEM 1.0 Beta
Projection matching in cisTEM
 emd_23635.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 600 600 600 0 0 0 600 600 600 635.4 635.4 635.4 90.0 90.0 90.0 X Y Z -18.019939999999998 32.981194000000002 0.003294716 0.6316574 1.059 1.059 1.059 4.5 AUTHOR Unmasked unsharpened gamma-TuRC(SS) main map OTHER REAL 60.0 emd_23635_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 600 600 600 0 0 0 600 600 600 635.4 635.4 635.4 90.0 90.0 90.0 X Y Z -14.698657000000001 26.158580000000001 -0.017595539 0.66709405 1.059 1.059 1.059 AUTHOR gamma-TuRC(SS) half map 1 emd_23635_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 600 600 600 0 0 0 600 600 600 635.4 635.4 635.4 90.0 90.0 90.0 X Y Z -14.457879 26.738354000000001 -0.01839197 0.6707473 1.059 1.059 1.059 AUTHOR gamma-TuRC(SS) half map 2