REL PDBe PDBe PDBe 2013-04-10 2013-04-24 2013-05-08 2013-06-19 Negative staining three-dimensional reconstruction of bacteriophage T7 connector/terminase complex Dauden MI Martin-Benito J Sanchez-Ferrero JC Pulido-Cid M Valpuesta JM Carrascosa JL packaging motor, connector, terminase, bacteriophage, DNA translocation, Packaging, single-particle reconstruction, ATPase. Dauden MI Martin-Benito J Sanchez-Ferrero JC Pulido-Cid M Valpuesta JM Carrascosa JL Large terminase conformational change induced by connector binding in bacteriophage T7. J.BIOL.CHEM. 288 16998 17007 2013 23632014 doi:10.1074/jbc.M112.448951 4bil FULLOVERLAP Connector/terminase complex of bacteriophage T7 Connector/terminase complex of bacteriophage T7 one homododecamer bound to one homopentamer 2 1.0 connector Enterobacteria phage T7 0.7
Each monomer of the connector is a 59 kDa protein.
12 Dodecamer true Escherichia coli BL21(DE3) pLys pET28Aa P03728 GO:0019012 large terminase Enterobacteria phage T7 bacteriophage T7 0.335
Each monomer of the terminase is a 67 kDa protein
5 Pentamer true Escherichia coli BL21(DE3) pLys pET21(+) P03694 GO:0090305 GO:0000166 GO:0004518 GO:0004519 GO:0005524 singleParticle particle 7.4
50 mM Sodium Phosphate buffer pH 7, 300 mM NaCl, 10 mM MgCl2, 1 mM ADP, 5 mM DTT and 20% (v/v) glycerol.
 NEGATIVE
GraFix-fixated proteins stained on 2% w/v uranyl acetate for 1 min.
Cu-collodion grids with thin carbon support, glow discharged.
 NONE OTHER FEI TECNAI F20 FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 200 2.26 1.5 3.2 67000.0 SIDE ENTRY, EUCENTRIC FFT live 2011-07-07 FEI EAGLE (4k x 4k) 15 573 16. GATAN conventional holder
The particles were selected using Maximum Likelihood procedures form an initial set of 10034 particles.
Each plate
 C5 OTHER 29.0 FSC 0.33 CUT-OFF XMIPP, EMAN, Spider 837
SPIDER
 emd_2356.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 112 112 112 0 0 0 112 112 112 470.39996 470.39996 470.39996 90.0 90.0 90.0 X Y Z -0.02651265 0.06766804 -0.00067221 0.00622457 4.2 4.2 4.2 0.0248 AUTHOR Reconstruction of the connector/terminase complex, which presents two different symmetries (c12 and c5 respectively).
::::EMDATABANK.org::::EMD-2356::::
 3CPE A B C D E RIGID BODY FIT Chimera, SITUS
3CPE PDB was used as a model for the generation of the threading model of gp19 in the complex conformation.
REAL