2024-10-30 REL RCSB RCSB RCSB 2021-02-22 2021-06-16 2021-06-16 2024-10-30 Prefusion RSV F glycoprotein bound by neutralizing site V-directed antibody ADI-14442 Gilman MSA McLellan JS fusion, immunoglobulin, public clonotype, convergent recognition, VIRAL PROTEIN, VIRAL PROTEIN-IMMUNE SYSTEM complex Mukhamedova M Wrapp D Shen CH Gilman MSA Ruckwardt TJ Schramm CA Ault L Chang L Derrien-Colemyn A Lucas SAM Ransier A Darko S Phung E Wang L Zhang Y Rush SA Madan B Stewart-Jones GBE Costner PJ Holman LA Hickman SP Berkowitz NM Doria-Rose NA Morabito KM DeKosky BJ Gaudinski MR Chen GL Crank MC Misasi J Sullivan NJ Douek DC Kwong PD Graham BS McLellan JS Mascola JR Vaccination with prefusion-stabilized respiratory syncytial virus fusion protein induces genetically and antigenically diverse antibody responses. Immunity US 54 769 780.e6 2021 33823129 doi:10.1016/j.immuni.2021.03.004 1074-7613 2048 IUNIEH 7lue FULLOVERLAP Trimeric prefusion RSV F glycoprotein bound by three molecules of Fab ADI-14442. Trimeric prefusion RSV F glycoprotein bound by three molecules of Fab ADI-14442. 0 1 2 3
Single molecule of trimeric respiratory syncytial virus fusion protein ectodomain (RSV F) stabilized in the prefusion conformation and fused to the T4 fibritin (foldon) trimerization motif is bound by three molecules of Fab ADI-14442.
Respiratory syncytial virus A2 Trimeric prefusion RSV F glycoprotein 1 1
Single molecule of trimeric respiratory syncytial virus fusion protein ectodomain (RSV F) stabilized in the prefusion conformation and fused to the T4 fibritin (foldon) trimerization motif.
Respiratory syncytial virus A2 Fab ADI-14442 1 2 3
Three molecules of Fab ADI-14442, each composed of a heavy and a light chain, are bound to a single molecule of trimeric respiratory syncytial virus fusion protein ectodomain (RSV F) stabilized in the prefusion conformation and fused to the T4 fibritin (foldon) trimerization motif.
Homo sapiens Fusion glycoprotein F0 Respiratory syncytial virus A2 0.061132672 3 Homo sapiens LEVO QNITEEFYQSTCSAVSKGYLSALRTGWYTSVITIELSNIKEIKCNGTDAKVKLIKQELDKYKNAVTELQLLMQSTPATNN RARRELPRFMNYTLNNAKKTNVTLSKKRKRRFLGFLLGVGSAIASGVAVSKVLHLEGEVNKIKSALLSTNKAVVSLSNGV SVLTSKVLDLKNYIDKQLLPIVNKQSCSIPNIETVIEFQQKNNRLLEITREFSVNAGVTTPVSTYMLTNSELLSLINDMP ITNDQKKLMSNNVQIVRQQSYSIMSIIKEEVLAYVVQLPLYGVIDTPCWKLHTSPLCTTNTKEGSNICLTRTDRGWYCDN AGSVSFFPQAETCKVQSNRVFCDTMNSLTLPSEVNLCNVDIFNPKYDCKIMTSKTDVSSSVITSLGAIVSCYGKTKCTAS NKNRGIIKTFSNGCDYVSNKGVDTVSVGNTLYYVNKQEGKSLYVKGEPIINFYDPLVFPSDEFDASISQVNEKINQSLAF IRKSDELLSAIGGYIPEAPRDGQAYVRKDGEWVLLSTFLGSLEVLFQGPGHHHHHHHHSAWSHPQFEK W8RJF9 Heavy chain of human antibody Fab ADI-14442 Homo sapiens 0.023805615000000002 3 Homo sapiens LEVO QVQLVQSGSEVKKPGASVKVSCKASGYRFSNYGISWVRQAPGQGLEWMGWISAYNGNIKYGNNLQGRVTVTTDTSTATAY MEVRSLTSDDTAVYYCARDVPADGVHFMDVWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTV SWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD Light chain of human antibody Fab ADI-14442 Homo sapiens 0.024100821999999997 3 Homo sapiens LEVO DVVMTQSPLSLPVTLGQPASISCRSSQSLVHSDTNTYLNWFQQRPGQSPRRLIYKVSNRDSGVPDRFSGSGSGTTFTLKI SRVEAEDVGIYYCMQGSHWAPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQ SGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC singleParticle particle 0.8 8.0 200.0 NaCl Sodium chloride 2.0 NH2C(CH2OH)3HCl TRIS hydrochloride 0.02 NaN3 Sodium azide C-flat-1.2/1.3 PLASMA CLEANING ETHANE 100 277 FEI VITROBOT MARK IV FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 2.7 1.5 2.5 22500.0 GATAN K2 SUMMIT (4k x 4k) 9.0 48.0 1
Ab initio model generated using stochastic gradient descent
 C3 2.9 FSC 0.143 CUT-OFF RELION 3 beta 371323 RANDOM ASSIGNMENT RELION 3 beta
Ab initio model generated using stochastic gradient descent
 MAXIMUM LIKELIHOOD RELION 3 beta emd_23521.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 300 300 300 0 0 0 300 300 300 322.5 322.5 322.5 90.0 90.0 90.0 X Y Z -0.16903993 0.24221794 0.00013314525 0.004291453 1.075 1.075 1.075 0.04 AUTHOR Trimeric prefusion RSV F protein bound by three copies of Fab ADI-14442