<?xml version="1.0" encoding="UTF-8"?>
<emd xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="https://ftp.ebi.ac.uk/pub/databases/em_ebi/emdb_related/emdb-schemas/emdb_schemas/v3/v3_0_9_3/emdb.xsd" version="3.0.9.3" emdb_id="EMD-23391">
    <admin>
        <current_status>
            <date>2024-10-30</date>
            <code>REL</code>
            <processing_site>RCSB</processing_site>
        </current_status>
        <sites>
            <deposition>RCSB</deposition>
            <last_processing>RCSB</last_processing>
        </sites>
        <key_dates>
            <deposition>2021-01-28</deposition>
            <header_release>2021-03-03</header_release>
            <map_release>2021-03-03</map_release>
            <update>2024-10-30</update>
        </key_dates>
        <grant_support>
            <grant_reference>
                <funding_body>National Natural Science Foundation of China (NSFC)</funding_body>
                <code>81922071</code>
                <country>China</country>
            </grant_reference>
            <grant_reference>
                <funding_body>National Natural Science Foundation of China (NSFC)</funding_body>
                <code>31770796</code>
                <country>China</country>
            </grant_reference>
            <grant_reference>
                <funding_body>National Institutes of Health/National Institute of Mental Health (NIH/NIMH)</funding_body>
                <code>RO1MH112205</code>
                <country>United States</country>
            </grant_reference>
            <grant_reference>
                <funding_body>National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)</funding_body>
                <code>R35GM128641</code>
                <country>United States</country>
            </grant_reference>
        </grant_support>
        <title>Allosteric modulator LY3154207 binding to dopamine-bound dopamine receptor 1 in complex with miniGs protein</title>
        <authors_list>
            <author>Zhuang Y</author>
            <author>Krumm B</author>
        </authors_list>
        <keywords>Dopamine receptor 2, Gs protein, PAM, LY3154207, SIGNALING PROTEIN</keywords>
    </admin>
    <crossreferences>
        <citation_list>
            <primary_citation>
                <journal_citation published="true">
                    <author order="1">Zhuang Y</author>
                    <author ORCID="0000-0001-6039-4767" order="2">Krumm B</author>
                    <author order="3">Zhang H</author>
                    <author order="4">Zhou XE</author>
                    <author order="5">Wang Y</author>
                    <author order="6">Huang XP</author>
                    <author order="7">Liu Y</author>
                    <author ORCID="0000-0003-3735-645X" order="8">Cheng X</author>
                    <author order="9">Jiang Y</author>
                    <author ORCID="0000-0003-0656-6315" order="10">Jiang H</author>
                    <author ORCID="0000-0001-9042-4007" order="11">Zhang C</author>
                    <author order="12">Yi W</author>
                    <author ORCID="0000-0002-0561-6520" order="13">Roth BL</author>
                    <author ORCID="0000-0003-2189-0244" order="14">Zhang Y</author>
                    <author ORCID="0000-0002-6829-8144" order="15">Xu HE</author>
                    <title>Mechanism of dopamine binding and allosteric modulation of the human D1 dopamine receptor.</title>
                    <journal_abbreviation>Cell Res.</journal_abbreviation>
                    <country>CN</country>
                    <volume>31</volume>
                    <first_page>593</first_page>
                    <last_page>596</last_page>
                    <year>2021</year>
                    <external_references type="PUBMED">33750903</external_references>
                    <external_references type="DOI">doi:10.1038/s41422-021-00482-0</external_references>
                    <external_references type="ISSN">1001-0602</external_references>
                </journal_citation>
            </primary_citation>
            <secondary_citation>
                <journal_citation published="true">
                    <author order="16">Zhuang Y</author>
                    <author order="17">Krumm B</author>
                    <author order="18">Zhang H</author>
                    <author order="19">Zhou XE</author>
                    <author order="20">Wang Y</author>
                    <author order="21">Guo J</author>
                    <author order="22">Huang X-P</author>
                    <author order="23">Liu Y</author>
                    <author order="24">Wang L</author>
                    <author order="25">Cheng X</author>
                    <author order="26">Jiang Y</author>
                    <author order="27">Jiang H</author>
                    <author order="28">Melcher K</author>
                    <author order="29">Zhang C</author>
                    <author order="30">Yi W</author>
                    <author order="31">Roth BL</author>
                    <author order="32">Zhang Y</author>
                    <author order="33">Xu HE</author>
                    <title>Mechanism of dopamine binding and allosteric modulation of the human D1 dopamine receptor</title>
                    <journal_abbreviation>Biorxiv</journal_abbreviation>
                    <country>US</country>
                    <year>2021</year>
                    <external_references type="DOI">doi:10.1101/2021.02.07.430101</external_references>
                    <external_references type="ISSN">2692-8205</external_references>
                </journal_citation>
            </secondary_citation>
        </citation_list>
        <pdb_list>
            <pdb_reference>
                <pdb_id>7ljd</pdb_id>
                <relationship>
                    <in_frame>FULLOVERLAP</in_frame>
                </relationship>
            </pdb_reference>
        </pdb_list>
    </crossreferences>
    <sample>
        <name>LY3154207 and dopamine-bound dopamine receptor 1 in complex with Gs protein</name>
        <supramolecule_list>
            <complex_supramolecule supramolecule_id="1">
                <name>LY3154207 and dopamine-bound dopamine receptor 1 in complex with Gs protein</name>
                <parent>0</parent>
                <macromolecule_list>
                    <macromolecule>
                        <macromolecule_id>1</macromolecule_id>
                    </macromolecule>
                    <macromolecule>
                        <macromolecule_id>2</macromolecule_id>
                    </macromolecule>
                    <macromolecule>
                        <macromolecule_id>3</macromolecule_id>
                    </macromolecule>
                    <macromolecule>
                        <macromolecule_id>4</macromolecule_id>
                    </macromolecule>
                    <macromolecule>
                        <macromolecule_id>5</macromolecule_id>
                    </macromolecule>
                </macromolecule_list>
                <natural_source database="NCBI">
                    <organism ncbi="9606">Homo sapiens</organism>
                </natural_source>
            </complex_supramolecule>
        </supramolecule_list>
        <macromolecule_list>
            <protein_or_peptide macromolecule_id="1">
                <name>D(1A) dopamine receptor</name>
                <natural_source database="NCBI">
                    <organism ncbi="9606">Homo sapiens</organism>
                </natural_source>
                <molecular_weight>
                    <theoretical units="MDa">0.055668707</theoretical>
                </molecular_weight>
                <number_of_copies>1</number_of_copies>
                <recombinant_expression database="NCBI">
                    <recombinant_organism ncbi="7108">Spodoptera frugiperda</recombinant_organism>
                </recombinant_expression>
                <enantiomer>LEVO</enantiomer>
                <sequence>
                    <string>DYKDDDDVDMGQPGNGSAFLLAPNGSHAPDHDVTQQRDEENLYFQGASMRTLNTSAMDGTGLVVERDFSVRILTACFLSL
LILSTLLGNTLVCAAVIRFRHLRSKVTNFFVISLAVSDLLVAVLVMPWKAVAEIAGFWPFGSFCNIWVAFDIMCSTASIL
NLCVISVDRYWAISSPFRYERKMTPKAAFILISVAWTLSVLISFIPVQLSWHKAKPTSPSDGNATSLAETIDNCDSSLSR
TYAISSSVISFYIPVAIMIVTYTRIYRIAQKQIRRIAALERAAVHAKNCQTTTGNGKPVECSQPESSFKMSFKRETKVLK
TLSVIMGVFVCCWLPFFILNCILPFCGSGETQPFCIDSNTFDVFVWFGWANSSLNPIIYAFNADFRKAFSTLLGCYRLCP
ATNNAIETVSINNNGAAMFSSHHEPRGSISKECNLVYLIPHAVGSSEDLKKEEAAGIARPLEKLSPALSVILDYDTDVSL
EKIQPITQNGQHPTHHHHHHHH</string>
                    <external_references type="UNIPROTKB">P21728</external_references>
                </sequence>
            </protein_or_peptide>
            <protein_or_peptide macromolecule_id="2">
                <name>Engineered Gs protein alpha subunit</name>
                <natural_source database="NCBI">
                    <organism ncbi="9606">Homo sapiens</organism>
                </natural_source>
                <molecular_weight>
                    <theoretical units="MDa">0.029020916</theoretical>
                </molecular_weight>
                <number_of_copies>1</number_of_copies>
                <recombinant_expression database="NCBI">
                    <recombinant_organism ncbi="7108">Spodoptera frugiperda</recombinant_organism>
                </recombinant_expression>
                <enantiomer>LEVO</enantiomer>
                <sequence>
                    <string>MGCLGNSKTEDQRNEEKAQREANKMIEKQLQKDKQVYRATHRLLLLGADNSGKSTIVKQMRIYHVNSGIFETKFQVDKVN
FHMFDVGAQRDERRKWIQCFNDVTAIIFVVDSSDYNRLQEALNDFKSIWNNKWLRTISVILFLNKQDLLAEKVLAGKSKI
EDYFPEFARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCSVDTENARRIFNDCRDIIQRMHL
RQYELL</string>
                </sequence>
            </protein_or_peptide>
            <protein_or_peptide macromolecule_id="3">
                <name>Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1</name>
                <natural_source database="NCBI">
                    <organism ncbi="10116">Rattus norvegicus</organism>
                </natural_source>
                <molecular_weight>
                    <theoretical units="MDa">0.039020664</theoretical>
                </molecular_weight>
                <number_of_copies>1</number_of_copies>
                <recombinant_expression database="NCBI">
                    <recombinant_organism ncbi="7108">Spodoptera frugiperda</recombinant_organism>
                </recombinant_expression>
                <enantiomer>LEVO</enantiomer>
                <sequence>
                    <string>HHHHHHHHMGSLLQSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDS
RLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLS
CCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHES
DINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGV
LAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN</string>
                    <external_references type="UNIPROTKB">P54311</external_references>
                </sequence>
            </protein_or_peptide>
            <protein_or_peptide macromolecule_id="4">
                <name>Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2</name>
                <natural_source database="NCBI">
                    <organism ncbi="9913">Bos taurus</organism>
                </natural_source>
                <molecular_weight>
                    <theoretical units="MDa">0.007432554</theoretical>
                </molecular_weight>
                <number_of_copies>1</number_of_copies>
                <recombinant_expression database="NCBI">
                    <recombinant_organism ncbi="7108">Spodoptera frugiperda</recombinant_organism>
                </recombinant_expression>
                <enantiomer>LEVO</enantiomer>
                <sequence>
                    <string>ASNNTASIAQARKLVEQLKMEANIDRIKVSKAAADLMAYCEAHAKEDPLLTPVPASENPFREKKFFC</string>
                    <external_references type="UNIPROTKB">P63212</external_references>
                </sequence>
            </protein_or_peptide>
            <protein_or_peptide macromolecule_id="5">
                <name>Nanobody 35</name>
                <natural_source database="NCBI">
                    <organism ncbi="9844">Lama glama</organism>
                </natural_source>
                <molecular_weight>
                    <theoretical units="MDa">0.014845516</theoretical>
                </molecular_weight>
                <number_of_copies>1</number_of_copies>
                <recombinant_expression database="NCBI">
                    <recombinant_organism ncbi="562">Escherichia coli</recombinant_organism>
                </recombinant_expression>
                <enantiomer>LEVO</enantiomer>
                <sequence>
                    <string>MQVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTL
YLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSHHHHHH</string>
                </sequence>
            </protein_or_peptide>
            <ligand macromolecule_id="6">
                <name>L-DOPAMINE</name>
                <molecular_weight>
                    <theoretical units="MDa">0.000153178</theoretical>
                </molecular_weight>
                <number_of_copies>1</number_of_copies>
                <formula>LDP</formula>
            </ligand>
            <ligand macromolecule_id="7">
                <name>2-[2,6-bis(chloranyl)phenyl]-1-[(1S,3R)-3-(hydroxymethyl)-1-methyl-5-(3-methyl-3-oxidanyl-butyl)-3,4-dihydro-1H-isoquinolin-2-yl]ethanone</name>
                <molecular_weight>
                    <theoretical units="MDa">0.000450398</theoretical>
                </molecular_weight>
                <number_of_copies>1</number_of_copies>
                <formula>G4C</formula>
            </ligand>
            <ligand macromolecule_id="8">
                <name>CHOLESTEROL</name>
                <molecular_weight>
                    <theoretical units="MDa">0.000386654</theoretical>
                </molecular_weight>
                <number_of_copies>5</number_of_copies>
                <formula>CLR</formula>
            </ligand>
            <ligand macromolecule_id="9">
                <name>PALMITIC ACID</name>
                <molecular_weight>
                    <theoretical units="MDa">0.00025642399999999994</theoretical>
                </molecular_weight>
                <number_of_copies>4</number_of_copies>
                <formula>PLM</formula>
            </ligand>
        </macromolecule_list>
    </sample>
    <structure_determination_list>
        <structure_determination structure_determination_id="1">
            <method>singleParticle</method>
            <aggregation_state>particle</aggregation_state>
            <specimen_preparation_list>
                <single_particle_preparation preparation_id="1">
                    <buffer>
                        <ph>7.2</ph>
                    </buffer>
                    <vitrification>
                        <cryogen_name>ETHANE</cryogen_name>
                    </vitrification>
                </single_particle_preparation>
            </specimen_preparation_list>
            <microscopy_list>
                <single_particle_microscopy microscopy_id="1">
                    <microscope>FEI TITAN KRIOS</microscope>
                    <illumination_mode>FLOOD BEAM</illumination_mode>
                    <imaging_mode>BRIGHT FIELD</imaging_mode>
                    <electron_source>FIELD EMISSION GUN</electron_source>
                    <acceleration_voltage units="kV">300</acceleration_voltage>
                    <image_recording_list>
                        <image_recording image_recording_id="1">
                            <film_or_detector_model>GATAN K2 SUMMIT (4k x 4k)</film_or_detector_model>
                            <average_electron_dose_per_image units="e/Å^2">64.0</average_electron_dose_per_image>
                        </image_recording>
                    </image_recording_list>
                </single_particle_microscopy>
            </microscopy_list>
            <singleparticle_processing image_processing_id="1">
                <image_recording_id>1</image_recording_id>
                <startup_model type_of_model="PDB ENTRY">
                    <pdb_model>
                        <pdb_id>3SN6</pdb_id>
                    </pdb_model>
                </startup_model>
                <final_reconstruction>
                    <resolution units="Å" res_type="BY AUTHOR">3.2</resolution>
                    <resolution_method>FSC 0.143 CUT-OFF</resolution_method>
                    <number_images_used>249418</number_images_used>
                </final_reconstruction>
                <initial_angle_assignment>
                    <type>NOT APPLICABLE</type>
                </initial_angle_assignment>
                <final_angle_assignment>
                    <type>NOT APPLICABLE</type>
                </final_angle_assignment>
            </singleparticle_processing>
        </structure_determination>
    </structure_determination_list>
    <map format="CCP4" size_kbytes="28312">
        <file>emd_23391.map.gz</file>
        <symmetry>
            <space_group>1</space_group>
        </symmetry>
        <data_type>IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES)</data_type>
        <dimensions>
            <col>192</col>
            <row>192</row>
            <sec>192</sec>
        </dimensions>
        <origin>
            <col>0</col>
            <row>0</row>
            <sec>0</sec>
        </origin>
        <spacing>
            <x>192</x>
            <y>192</y>
            <z>192</z>
        </spacing>
        <cell>
            <a units="Å">194.68802</a>
            <b units="Å">194.68802</b>
            <c units="Å">194.68802</c>
            <alpha units="deg">90.0</alpha>
            <beta units="deg">90.0</beta>
            <gamma units="deg">90.0</gamma>
        </cell>
        <axis_order>
            <fast>X</fast>
            <medium>Y</medium>
            <slow>Z</slow>
        </axis_order>
        <statistics>
            <minimum>-0.3297025</minimum>
            <maximum>0.522096</maximum>
            <average>-0.00026958805</average>
            <std>0.013466031</std>
        </statistics>
        <pixel_spacing>
            <x units="Å">1.014</x>
            <y units="Å">1.014</y>
            <z units="Å">1.014</z>
        </pixel_spacing>
        <contour_list>
            <contour primary="true">
                <level>0.022</level>
                <source>AUTHOR</source>
            </contour>
        </contour_list>
        <label>::::EMDATABANK.org::::EMD-23391::::</label>
    </map>
</emd>
