2024-10-16 REL RCSB RCSB RCSB 2020-10-27 2020-11-11 2020-11-11 2024-10-16 Other private United States Schoof MS Faust BF Complex, Nanobody, VHH, VIRAL PROTEIN-IMMUNE SYSTEM complex Schoof M Faust B Saunders RA Sangwan S Rezelj V Hoppe N Boone M Billesbolle CB Puchades C Azumaya CM Kratochvil HT Zimanyi M Deshpande I Liang J Dickinson S Nguyen HC Chio CM Merz GE Thompson MC Diwanji D Schaefer K Anand AA Dobzinski N Zha BS Simoneau CR Leon K White KM Chio US Gupta M Jin M Li F Liu Y Zhang K Bulkley D Sun M Smith AM Rizo AN Moss F Brilot AF Pourmal S Trenker R Pospiech T Gupta S Barsi-Rhyne B Belyy V Barile-Hill AW Nock S Liu Y Krogan NJ Ralston CY Swaney DL Garcia-Sastre A Ott M Vignuzzi M QCRG Structural Biology Consortium Walter P Manglik A Science US 370 1473 1479 2020 33154106 doi:10.1126/science.abe3255 1095-9203 0038 SCIEAS EMD-22909 other EM volume EMD-22908 other EM volume EMD-22911 other EM volume EMD-22910 other EM volume 7kkk FULLOVERLAP Complex of Spike S2P glycoprotein with synthetic nanobody Nb6 Complex of Spike S2P glycoprotein with synthetic nanobody Nb6 0 1 2 Spike S2P glycoprotein 1 1 Severe acute respiratory syndrome coronavirus 2 synthetic nanobody Nb6 1 2 synthetic construct Spike glycoprotein Severe acute respiratory syndrome coronavirus 2 0.142399375 3 Cricetulus griseus LEVO MFVFLVLLPLVSSQCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFD NPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVY SSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALEPLVDLPIGINITRFQT LLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRV QPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSF VIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPC NGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFL PFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQDVNCTEVPVAIHADQLTPTWRVYSTGS NVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPGSASSVASQSIIAYTMSLGAENSVAYSNNSIAIPTNFTI SVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGF NFSQILPDPSKPSKRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAG TITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALN TLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRV DFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNT FVSGNCDVVIGIVNNTVYDPLQPELDSFKEELDKYFKNHTSPDVDLGDISGINASVVNIQKEIDRLNEVAKNLNESLIDL QELGKYEQGSGYIPEAPRDGQAYVRKDGEWVLLSTFLGRSLEVLFQGPGHHHHHHHHSAWSHPQFEKGGGSGGGGSGGSA WSHPQFEK P0DTC2 Synthetic nanobody Nb6 synthetic construct 0.012696165999999998 3 Escherichia coli BL21(DE3) LEVO QVQLVESGGGLVQAGGSLRLSCAASGIIFGRNAMGWYRQAPGKERELVAGITRRGSITYYADSVKGRFTISRDNAKNTVY LQMNSLKPEDTAVYYCAADPASPAPGDYWGQGTQVTVSS 2-acetamido-2-deoxy-beta-D-glucopyranose 0.000221208 30 NAG singleParticle particle 8.0 Quantifoil GOLD 300 CARBON HOLEY GLOW DISCHARGE 30 ETHANE 100 FEI VITROBOT MARK IV FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 2.7 105000.0 FEI TITAN KRIOS AUTOGRID HOLDER GIF Bioquantum 20 GATAN K3 BIOQUANTUM (6k x 4k) 5317 66.0 1 2033067 1 C3 3.03 FSC 0.143 CUT-OFF cisTEM 1.0.0 58493 MAXIMUM LIKELIHOOD MAXIMUM LIKELIHOOD cisTEM 1.0.0 6VXX PDB experimental model FLEXIBLE FIT REAL emd_22907_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 512 512 512 0 0 0 512 512 512 427.008 427.008 427.008 90.0 90.0 90.0 X Y Z -6.480391 9.304879 0.000008548698 0.4058413 0.834 0.834 0.834 AUTHOR ::::EMDATABANK.org::::EMD-22907:::: emd_22907_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 512 512 512 0 0 0 512 512 512 427.008 427.008 427.008 90.0 90.0 90.0 X Y Z -6.57633 9.388323 -0.0005914212 0.40366137 0.834 0.834 0.834 AUTHOR ::::EMDATABANK.org::::EMD-22907::::