The Cryo-EM Structure of Alcohol Dehyrogenase from Yeast in complex with NAD+ and Trifluoro Ethanol (TFE)

2024-10-16 REL RCSB RCSB RCSB 2020-10-05 2021-03-31 2021-03-31 2024-10-16 The Cryo-EM Structure of Alcohol Dehyrogenase from Yeast in complex with NAD+ and Trifluoro Ethanol (TFE) Subramanian R Chang L Guntupalli SR Alcohol dehydrogenase, holo-enzyme complex, OXIDOREDUCTASE Guntupalli SR Li Z Chang L Plapp BV Subramanian R Cryo-Electron Microscopy Structures of Yeast Alcohol Dehydrogenase. Biochemistry US 60 663 677 2021 33620215 doi:10.1021/acs.biochem.0c00921 0006-2960 0033 BICHAW Plapp BV Charlier HA Ramaswamy S Yeast alcohol dehydrogenase structure and catalysis. Biochemistry US 53 5791 5803 2014 25157460 doi:10.1021/bi5006442 1520-4995 0033 BICHAW 7kcb FULLOVERLAP Alcohol Dehydrogenase NAD+ Pyrazole complex Alcohol Dehydrogenase NAD+ Pyrazole complex 0 1 Saccharomyces cerevisiae 0.37 ADH1 isoform 1 Saccharomyces cerevisiae 0.036759906 4 LEVO SIPETQKGVIFYESHGKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVGMGENVK GWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYTHDGSFQQYATADAVQAAHIPQGTDLAQVAPILCAGITVYK ALKSANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAH GVINVSVSEAAIEASTRYVRANGTTVLVGMPAGAKCCSDVFNQVVKSISIVGSYVGNRADTREALDFFARGLVKSPIKVV GLSTLPEIYEKMEKGQIVGRYVVDTSK A0A6A5Q6H9 ZINC ION 6.5409e-05 8 ZN NICOTINAMIDE-ADENINE-DINUCLEOTIDE 0.0006634249999999999 4 NAD TRIFLUOROETHANOL 0.00010004 4 ETF singleParticle particle 5 8.199999999999999 50.0 C4H11NO3 Tris

Tris HCl buffer 5mM with 200mM KCl adjusted to pH 8.2.

Quantifoil GOLD 300 GLOW DISCHARGE 60 AIR ETHANE 100 298 FEI VITROBOT MARK II

Purified by Size Exclusion chromatography

FEI TITAN KRIOS OTHER BRIGHT FIELD FIELD EMISSION GUN 300 100.0 2.7 0.8 2.0 NITROGEN GATAN K3 BIOQUANTUM (6k x 4k) 54.0 1 BACK PROJECTION 2.77 FSC 0.143 CUT-OFF cryoSPARC 2 1284904 RANDOM ASSIGNMENT MAXIMUM LIKELIHOOD emd_22807.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 180 180 180 0 0 0 180 180 180 188.99998 188.99998 188.99998 90.0 90.0 90.0 X Y Z -6.826809 9.113795 0.0041356995 0.37798807 1.05 1.05 1.05 1.5 AUTHOR ::::EMDATABANK.org::::EMD-22807:::: Cryo-EM Structure of Alcohol Dehyrogenase from Yeast in complex with NAD+ and Pyrazole 5ENV A 1-347 PDB experimental model RIGID BODY FIT Correlation Coefficient REAL 39.299999999999997