2024-05-15 REL RCSB RCSB RCSB 2020-08-09 2020-09-09 2020-09-09 2024-05-15 Howard Hughes Medical Institute (HHMI) United States National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) F32GM129923 United States National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) GM45436 United States Jaremko MJ Joshua-Tor L replication, AAA+, ORC, DNA-binding, cryoEM, replication-DNA complex Jaremko MJ On KF Thomas DR Stillman B Joshua-Tor L Elife US 9 2020 32808929 doi:10.7554/eLife.58622 2050-084X 7jps FULLOVERLAP ORC-DNA ORC-DNA 0 1 2 3 4 5 6 7

5 subunit ORC complex with DNA bound in the core

Homo sapiens .29653 Origin recognition complex subunit 1 Homo sapiens 0.044310887 1 Spodoptera frugiperda LEVO MAPQIRSRSLAAQEPASVLEEARLRLHVSAVPESLPCREQEFQDIYNFVESKLLDHTGGCMYISGVPGTGKTATVHEVIR CLQQAAQANDVPPFQYIEVNGMKLTEPHQVYVQILQKLTGQKATANHAAELLAKQFCTRGSPQETTVLLVDELDLLWTHK QDIMYNLFDWPTHKEARLVVLAIANTMDLPERIMMNRVSSRLGLTRMCFQPYTYSQLQQILRSRLKHLKAFEDDAIQLVA RKVAALSGDARRCLDICRRATEICEFSQQKPDSPGLVTIAHSMEAVDEMFSSSYITAIKNSSVLEQSFLRAILAEFRRSG LEEATFQQIYSQHVALCRMEGLPYPTMSETMAVCSHLGSCRLLLVEPSRNDLLLRVRLNVSQDDVLYALKDE Q13415 Origin recognition complex subunit 2 Homo sapiens 0.066063375 1 Spodoptera frugiperda LEVO MSKPELKEDKMLEVHFVGDDDVLNHILDREGGAKLKKERAQLLVNPKKIIKKPEYDLEEDDQEVLKDQNYVEIMGRDVQE SLKNGSATGGGNKVYSFQNRKHSEKMAKLASELAKTPQKSVSFSLKNDPEITINVPQSSKGHSASDKVQPKNNDKSEFLS TAPRSLRKRLIVPRSHSDSESEYSASNSEDDEGVAQEHEEDTNAVIFSQKIQAQNRVVSAPVGKETPSKRMKRDKTSDLV EEYFEAHSSSKVLTSDRTLQKLKRAKLDQQTLRNLLSKVSPSFSAELKQLNQQYEKLFHKWMLQLHLGFNIVLYGLGSKR DLLERFRTTMLQDSIHVVINGFFPGISVKSVLNSITEEVLDHMGTFRSILDQLDWIVNKFKEDSSLELFLLIHNLDSQML RGEKSQQIIGQLSSLHNIYLIASIDHLNAPLMWDHAKQSLFNWLWYETTTYSPYTEETSYENSLLVKQSGSLPLSSLTHV LRSLTPNARGIFRLLIKYQLDNQDNPSYIGLSFQDFYQQCREAFLVNSDLTLRAQLTEFRDHKLIRTKKGTDGVEYLLIP VDNGTLTDFLEKEEEEA Q13416 Origin recognition complex subunit 3 Homo sapiens 0.082436133 1 Spodoptera frugiperda LEVO MATSSMSKGCFVFKPNSKKRKISLPIEDYFNKGKNEPEDSKLRFETYQLIWQQMKSENERLQEELNKNLFDNLIEFLQKS HSGFQKNSRDLGGQIKLREIPTAALVLGVNVTDHDLTFGSLTEALQNNVTPYVVSLQAKDCPDMKHFLQKLISQLMDCCV DIKSKEEESVHVTQRKTHYSMDSLSSWYMTVTQKTDPKMLSKKRTTSSQWQSPPVVVILKDMESFATKVLQDFIIISSQH LHEFPLILIFGIATSPIIIHRLLPHAVSSLLCIELFQSLSCKEHLTTVLDKLLLTTQFPFKINEKVLQVLTNIFLYHDFS VQNFIKGLQLSLLEHFYSQPLSVLCCNLPEAKRRINFLSNNQCENIRRLPSFRRYVEKQASEKQVALLTNERYLKEETQL LLENLHVYHMNYFLVLRCLHKFTSSLPKYPLGRQIRELYCTCLEKNIWDSEEYASVLQLLRMLAKDELMTILEKCFKVFK SYCENHLGSTAKRIEEFLAQFQSLDAETKEEEDASGSQPKGLQKTDLYHLQKSLLEMKELRRSKKQTKFEVLRENVVNFI DCLVREYLLPPETQPLHEVVYFSAAHALREHLNAAPRIALHTALNNPYYYLKNEALKSEEGCIPNIAPDICIAYKLHLEC SRLINLVDWSEAFATVVTAAEKMDANSATSEEMNEIIHARFIRAVSELELLGFIKPTKQKTDHVARLTWGGC Q9UBD5 Origin recognition complex subunit 4 Homo sapiens 0.050443266 1 Spodoptera frugiperda LEVO MSSRKSKSNSLIHTECLSQVQRILRERFCRQSPHSNLFGVQVQYKHLSELLKRTALHGESNSVLIIGPRGSGKTMLINHA LKELMEIEEVSENVLQVHLNGLLQINDKIALKEITRQLNLENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDE FDLFAHHKNQTLLYNLFDISQSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFPQYVKIFKEQLSLPAEF PDKVFAEKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNRVTASHPFMTAVDLMEASQLCSMDSKANIVHG LSVLEICLIIAMKHLNDIYEEEPFNFQMVYNEFQKFVQRKAHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQ LMKLLLDNTQIMNALQKYPNCPTDVRQWATSSLSWL O43929 Origin recognition complex subunit 5 Homo sapiens 0.050349934 1 Spodoptera frugiperda LEVO MPHLENVVLCRESQVSILQSLFGERHHFSFPSIFIYGHTASGKTYVTQTLLKTLELPHVFVNCVECFTLRLLLEQILNKL NHLSSSEDGCSTEITCETFNDFVRLFKQVTTAENLKDQTVYIVLDKAEYLRDMEANLLPGFLRLQELADRNVTVLFLSEI VWEKFRPNTGCFEPFVLYFPDYSIGNLQKILSHDHPPEYSADFYAAYINILLGVFYTVCRDLKELRHLAVLNFPKYCEPV VKGEASERDTRKLWRNIEPHLKKAMQTVYLREISSSQWEKLQKDDTDPGQLKGLSAHTHVELPYYSKFILIAAYLASYNP ARTDKRFFLKHHGKIKKTNFLKKHEKTSNHLLGPKPFPLDRLLAILYSIVDSRVAPTANIFSQITSLVTLQLLTLVGHDD QLDGPKYKCTVSLDFIRAIARTVNFDIIKYLYDFL O43913 DNA (5'-D(*AP*TP*AP*TP*AP*TP*AP*TP*AP*TP*AP*AP*T)-3') Spodoptera frugiperda 0.003972647 1 (DA)(DT)(DA)(DT)(DA)(DT)(DA)(DT)(DA)(DT)(DA)(DA)(DT) DNA DNA (5'-D(*AP*TP*TP*AP*TP*AP*TP*AP*TP*AP*TP*AP*T)-3') Spodoptera frugiperda 0.003963632999999999 1 (DA)(DT)(DT)(DA)(DT)(DA)(DT)(DA)(DT)(DA)(DT)(DA)(DT) DNA ADENOSINE-5'-TRIPHOSPHATE 0.000507181 3 ATP MAGNESIUM ION 2.4305e-05 3 MG POTASSIUM ION 3.9098e-05 1 K singleParticle particle 0.8 7.5 25.0 C8H18N2O4S HEPES 80.0 NaCl sodium chloride 3.3 C4H10O2S2 DTT 0.8 C10H16N5O13P3 ATP 0.05 C47H88O22 Lauryl Maltose Neopentyl Glycol Quantifoil R2/2 COPPER 300 GLOW DISCHARGE ETHANE LEICA EM GP TFS KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 100.0 2.7 1.0 2.4 GATAN K2 SUMMIT (4k x 4k) COUNTING 1 9068 6.0 66.0 1 2097508 5UJM C1 4.4 FSC 0.143 CUT-OFF RELION 3.0 37734 ANGULAR RECONSTITUTION cryoSPARC 2

Utilized Cryosparc to generate initial model, then 3D classification in Relion using the Cryosparc initial m

ANGULAR RECONSTITUTION RELION 3.0 5UJM A PDB experimental model 5UJM B PDB experimental model 5UJM C PDB experimental model 5UJM D PDB experimental model 5UJM E PDB experimental model RIGID BODY FIT Correlation Coefficient REAL 231.0 BACKBONE TRACE REAL