REL PDBe PDBe PDBe 2012-12-11 2013-01-09 2013-02-13 2013-03-27 The Cryo-EM structure of Arabis mosaic virus Lai-Kee-Him J Schellenberger P Dumas C Richard E Trapani S Komar V Demangeat G Ritzenthaler C Bron P Arabis mosaic virus, Nepovirus, cryo-electron microscopy, image processing, molecular dynamics flexible fitting, nematode transmission Lai-Kee-Him J Schellenberger P Dumas C Richard E Trapani S Komar V Demangeat G Ritzenthaler C Bron P The backbone model of the Arabis mosaic virus reveals new insights into functional domains of Nepovirus capsid. J.STRUCT.BIOL. 182 1 9 2013 23376736 doi:10.1016/j.jsb.2013.01.007 Purified ArMV particle containing its RNA Purified ArMV particle containing its RNA 2 Arabis mosaic virus
The virion is purified from infected plants and contains its RNA
Arabis mosaic virus Chenopodium quinoa PLANTAE(HIGHER PLANTS) 300 3 VIRION SPECIES false false ArMV singleParticle particle 2 7.0
15 mM sodium phosphate and 5 mM potassium phosphate pH 7.0
Quantifoil R 2/2 grids (Quantifoil Micro Tools GmbH, Jena, Germany)
 ETHANE 98 103.15 GATAN CRYOPLUNGE 3 blotted for 1s and then flash frozen in liquid ethane JEOL 2200FS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 200 2 1.2 2.5 50000.0 46980.0 GATAN LIQUID NITROGEN 93.15 Objective lens astigmatism was corrected at 200,000 times magnification omega 0.0 20.0 2011-09-01 KODAK SO-163 FILM NIKON SUPER COOLSCAN 9000 7 400 18 8. gatan 626 0 0
Image processing was performed using AUTO3DEM package
Each particle
 I 6.5 FSC 0.5 CUT-OFF BOXER, CTFFIND3, CTFMIX, AUTO3DEM 7009 emd_2242.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 281 281 281 0 0 0 281 281 281 418.69 418.69 418.69 90.0 90.0 90.0 X Y Z 0.0 100.0 38.964431759999997 7.54202795 1.49 1.49 1.49 50.299999999999997 AUTHOR 3D cryo-EM map of ArMV
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