2024-03-06 REL RCSB RCSB RCSB 2020-07-18 2020-08-19 2020-08-19 2024-03-06 Canadian Institutes of Health Research (CIHR) PJT162186 Canada Canadian Institutes of Health Research (CIHR) PJT156261 Canada Cryo-EM structure of bedaquiline-saturated Mycobacterium smegmatis ATP synthase rotational state 2 Guo H Courbon GM Bedaquiline, Sirturo, TMC207, T207910, ATP synthase, mycobacteria, tuberculosis, HYDROLASE Guo H Courbon GM Bueler SA Mai J Liu J Rubinstein JL Structure of mycobacterial ATP synthase bound to the tuberculosis drug bedaquiline. Nature UK 589 143 147 2021 33299175 doi:10.1038/s41586-020-3004-3 1476-4687 0006 NATUAS Guo H Courbon GM Bueler SA Mai J Liu J Rubinstein JL Structure of mycobacterial ATP synthase with the TB drug bedaquiline Biorxiv US 2020 doi:10.1101/2020.08.06.225375 2692-8205 EMD-22311 other EM volume EMD-22312 other EM volume EMD-22313 other EM volume EMD-22314 other EM volume EMD-22316 other EM volume EMD-22317 other EM volume EMD-22318 other EM volume EMD-22319 other EM volume EMD-22320 other EM volume EMD-22321 other EM volume EMD-22322 other EM volume 7jg9 FULLOVERLAP ATP synthase from Mycobacterium smegmatis ATP synthase from Mycobacterium smegmatis 0 1 2 3 4 5 6 7 8 Mycolicibacterium smegmatis 0.55 ATP synthase subunit alpha Mycolicibacterium smegmatis 0.058951461000000004 3 LEVO MAELTISAADIEGAIEDYVSSFSADTEREEIGTVIDAGDGIAHVEGLPSVMTQELLEFPGGVLGVALNLDEHSVGAVILG EFEKIEEGQQVKRTGEVLSVPVGDAFLGRVVNPLGQPIDGQGDIAAETRRALELQAPSVVQRQSVSEPLQTGIKAIDAMT PIGRGQRQLIIGDRKTGKTAVCVDTILNQREAWLTGDPKQQVRCVYVAIGQKGTTIASVKRALEEGGAMEYTTIVAAPAS DAAGFKWLAPYTGSAIGQHWMYNGKHVLIVFDDLSKQADAYRAISLLLRRPPGREAFPGDVFYLHSRLLERCAKLSDELG GGSMTGLPIIETKANDISAFIPTNVISITDGQCFLESDLFNQGVRPAINVGVSVSRVGGAAQIKAMKEVAGSLRLDLSQY RELEAFAAFASDLDAASKAQLDRGARLVELLKQPQYSPLAVEEQVVAIFLGTQGHLDSVPVEDVQRFESELLEHVKASHS DIFDGIRETKKLSEEAEEKLVSVINEFKKGFQASDGSSVVVSENAEALDPEDLEKESVKVRKPAPKKA A0A0D6IV93 7.1.2.2 ATP synthase subunit beta Mycolicibacterium smegmatis 0.051670453 3 LEVO MTATAEKTAGRVVRITGPVVDVEFPRGSVPELFNALHAEITFGALAKTLTLEVAQHLGDSLVRCISMQPTDGLVRGVEVT DTGASISVPVGDGVKGHVFNALGDCLDDPGYGKDFEHWSIHRKPPAFSDLEPRTEMLETGLKVVDLLTPYVRGGKIALFG GAGVGKTVLIQEMINRIARNFGGTSVFAGVGERTREGNDLWVELADANVLKDTALVFGQMDEPPGTRMRVALSALTMAEF FRDEQGQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSTRGRSITSMQAVYVPADDYTDPAP ATTFAHLDATTELSRAVFSKGIFPAVDPLASSSTILDPAIVGDEHYRVAQEVIRILQRYKDLQDIIAILGIDELSEEDKQ LVNRARRIERFLSQNMMAAEQFTGQPGSTVPLKETIEAFDKLTKGEFDHLPEQAFFLIGGLDDLAKKAESLGAKL A0A0D6IU77 7.1.2.2 ATP synthase gamma chain Mycolicibacterium smegmatis 0.033439836 1 LEVO MAATLRELRGRIRSAGSIKKITKAQELIATSRIAKAQARVEAARPYAAEITNMLTELAGASALDHPLLVERKQPKRAGVL VVSSDRGLCGAYNANVLRRAEELFSLLRDEGKDPVLYVVGRKALGYFSFRQRTVVESWTGFSERPTYENAREIADTLVNA FMAGADDEGDDAGADGILGVDELHIVFTEFRSMLSQTAVARRAAPMEVEYVGEVETGPRTLYSFEPDPETLFDALLPRYI ATRVYAALLEAAASESASRRRAMKSATDNADDLIKALTLAANRERQAQITQEISEIVGGANALAGSK A0A0D6IUE3 ATP synthase epsilon chain Mycolicibacterium smegmatis 0.013277741 1 LEVO MADLNVEIVAVERELWSGPATFVFTRTTAGEIGILPRHIPLVAQLVDDAMVRVEREGEDDLRIAVDGGFLSVTEETVRIL VENAQFESEIDADAAKEDAASDDERTAAWGRARLRALGQID A0A0D6IU73 ATP synthase subunit a Mycolicibacterium smegmatis 0.027568482 1 LEVO MLAAEEGGAAIHVGHHTLVFELFGMTFNGDTILATAVTAVIVIALAFYLRAKVTSTGVPSGVQLFWEALTIQMRQQIEGS IGMKIAPFVLPLSVTIFVFILISNWLAVLPLQYGGADGAAAELYKAPASDINFVLALALFVFVCYHAAGIWRRGIVGHPI KVVKGHVAFLAPINIVEELAKPISLALRLFGNIFAGGILVALIAMFPWYIQWFPNAVWKTFDLFVGLIQAFIFSLLTILY FSQSMELDHEDH A0R206 ATP synthase subunit b Mycolicibacterium smegmatis 0.017636701 1 LEVO MGEFSATILAASQAAEEGGGGSNFLIPNGTFFAVLIIFLIVLGVISKWVVPPISKVLAEREAMLAKTAADNRKSAEQVAA AQADYEKEMAEARAQASALRDEARAAGRSVVDEKRAQASGEVAQTLTQADQQLSAQGDQVRSGLESSVDGLSAKLASRIL GVDVNSGGTQ A0A0D6IV98 ATP synthase subunit b-delta Mycolicibacterium smegmatis 0.047504723 1 LEVO MSIFIGQLIGFAVIAFIIVKWVVPPVRTLMRNQQEAVRAALAESAEAAKKLADADAMHAKALADAKAESEKVTEEAKQDS ERIAAQLSEQAGSEAERIKAQGAQQIQLMRQQLIRQLRTGLGAEAVNKAAEIVRAHVADPQAQSATVDRFLSELEQMAPS SVVIDTAATSRLRAASRQSLAALVEKFDSVAGGLDADGLTNLADELASVAKLLLSETALNKHLAEPTDDSAPKVRLLERL LSDKVSATTLDLLRTAVSNRWSTESNLIDAVEHTARLALLKRAEIAGEVDEVEEQLFRFGRVLDAEPRLSALLSDYTTPA EGRVALLDKALTGRPGVNQTAAALLSQTVGLLRGERADEAVIDLAELAVSRRGEVVAHVSAAAELSDAQRTRLTEVLSRI YGRPVSVQLHVDPELLGGLSITVGDEVIDGSIASRLAAAQTGLPD A0R203 ATP synthase subunit c Mycolicibacterium smegmatis 0.008597981999999999 9 LEVO MDLDPNAIITAGALIGGGLIMGGGAIGAGIGDGIAGNALISGIARQPEAQGRLFTPFFITVGLVEAAYFINLAFMALFVF ATPGLQ Q5TIX5 Bedaquiline 0.000555505 7 BQ1 singleParticle particle 6 7.4 Homemade COPPER/RHODIUM CARBON HOLEY GLOW DISCHARGE OTHER ETHANE-PROPANE 100 277 FEI VITROBOT MARK III FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 50.0 2.7 0.6 3.0 75000.0 FEI TITAN KRIOS AUTOGRID HOLDER NITROGEN FEI FALCON IV (4k x 4k) 4096 4096 7589 41.0 1 1825672 1 C1 BACK PROJECTION 3.4 FSC 0.143 CUT-OFF cryoSPARC 2.13 70566 PROJECTION MATCHING cryoSPARC 2.13 PROJECTION MATCHING cryoSPARC 2.13 3 265978.0 cryoSPARC 2.13 emd_22315.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 320 320 320 0 0 0 320 320 320 329.59998 329.59998 329.59998 90.0 90.0 90.0 X Y Z -0.16096081 15.001697 0.009877088 0.26940075 1.03 1.03 1.03 0.8 AUTHOR Locally sharpened map. 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