2020-09-30 REL RCSB RCSB RCSB 2020-06-26 2020-07-15 2020-07-15 2020-09-30 National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID) R01-AI127521 United States SARS-CoV-2 HexaPro S Two RBD up Wrapp D Hsieh C-L Goldsmith JA McLellan JS Hsieh CL Goldsmith JA Schaub JM DiVenere AM Kuo HC Javanmardi K Le KC Wrapp D Lee AG Liu Y Chou CW Byrne PO Hjorth CK Johnson NV Ludes-Meyers J Nguyen AW Park J Wang N Amengor D Lavinder JJ Ippolito GC Maynard JA Finkelstein IJ McLellan JS Structure-based design of prefusion-stabilized SARS-CoV-2 spikes. Science US 369 1501 1505 2020 32703906 doi:10.1126/science.abd0826 1095-9203 0038 SCIEAS Hsieh CL Goldsmith JA Schaub JM DiVenere AM Kuo HC Javanmardi K Le KC Wrapp D Lee AG Liu Y Chou CW Byrne PO Hjorth CK Johnson NV Ludes-Meyers J Nguyen AW Park J Wang N Amengor D Maynard JA Finkelstein IJ McLellan JS Structure-based Design of Prefusion-stabilized SARS-CoV-2 Spikes. Biorxiv US 2020 32577660 doi:10.1101/2020.05.30.125484 EMD-22222 associated EM volume EMD-22221 other EM volume Prefusion-stabilized SARS-CoV-2 spike trimer with two RBDs up Prefusion-stabilized SARS-CoV-2 spike trimer with two RBDs up 0 1 Severe acute respiratory syndrome coronavirus 2 Homo sapiens 0.6 SARS-CoV-2 HexaPro S Severe acute respiratory syndrome coronavirus 2 Homo sapiens LEVO MFVFLVLLPLVSSQCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQDVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPGSASSVASQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSKRSPIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGPALQIPFPMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLSSTPSALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDSFKEELDKYFKNHTSPDVDLGDISGINASVVNIQKEIDRLNEVAKNLNESLIDLQELGKYEQGSGYIPEAPRDGQAYVRKDGEWVLLSTFLGRSLEVLFQGPGHHHHHHHHSAWSHPQFEKGGGSGGGGSGGSAWSHPQFEK singleParticle particle 0.35 8 2.0 C4H11NO3 Tris 200.0 NaCl sodium chloride 0.02 NaN3 sodium azide C-flat-1.2/1.3 COPPER 400 PLASMA CLEANING ETHANE 100 277.15 FEI VITROBOT MARK IV
FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 GATAN K3 (6k x 4k) 45.0 1 695490 Warp C1 3.2 FSC 0.143 CUT-OFF cryoSPARC 90274 MAXIMUM LIKELIHOOD cryoSPARC MAXIMUM LIKELIHOOD cryoSPARC emd_22222.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 432 432 432 0 0 0 432 432 432 466.56003 466.56003 466.56003 90.0 90.0 90.0 X Y Z -0.90640354 1.8008655 -0.00047122283 0.03113756 1.08 1.08 1.08 0.15 AUTHOR Full map sharpened emd_22222_additional_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 432 432 432 0 0 0 432 432 432 466.56003 466.56003 466.56003 90.0 90.0 90.0 X Y Z -0.39722687 1.201792 -0.00047115944 0.023034727 1.08 1.08 1.08 AUTHOR Full map unsharpened emd_22222_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 432 432 432 0 0 0 432 432 432 466.56003 466.56003 466.56003 90.0 90.0 90.0 X Y Z -1.1000148 1.5392894 0.0004469143 0.13968055 1.08 1.08 1.08 AUTHOR Half-map B emd_22222_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 432 432 432 0 0 0 432 432 432 466.56003 466.56003 466.56003 90.0 90.0 90.0 X Y Z -1.3020922 1.4740462 0.00042451674 0.1397801 1.08 1.08 1.08 AUTHOR Half-map A