2024-10-09 REL RCSB RCSB RCSB 2020-05-28 2020-09-30 2020-09-30 2024-10-09 National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID) AI118932 United States National Institutes of Health/National Cancer Institute (NIH/NCI) CA116087 United States National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID) AI039657 United States National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) GM103310 United States National Institutes of Health/National Institute of Diabetes and Digestive and Kidney Disease (NIH/NIDDK) 2T32DK007673 United States National Institutes of Health/Office of the Director S10OD020011 United States Other government 1I01BX004447 United States Cryo-EM Structure of CagX and CagY within the dCag3 Helicobacter pylori PR Sheedlo MJ Chung JM T4SS, Secretion, PROTEIN TRANSPORT Sheedlo MJ Chung JM Sawhney N Durie CL Cover TL Ohi MD Lacy DB Cryo-EM reveals species-specific components within the Helicobacter pylori Cag type IV secretion system core complex. Elife US 9 2020 32876048 doi:10.7554/eLife.59495 2050-084X 6x6l FULLOVERLAP Helicobacter pylori dCag3 Cag T4SS PR Helicobacter pylori dCag3 Cag T4SS PR 0 1 2 Helicobacter pylori Cag pathogenicity island protein (Cag8) Helicobacter pylori (strain ATCC 700392 / 26695) ATCC 700392 / 26695 0.060607324 17 LEVO MGQAFFKKIVGCFCLGYLFLSSAIEAAALDIKNFNRGRVKVVNKKIAYLGDEKPITIWTSLDNVTVIQLEKDETISYITT GFNKGWSIVPNSNHIFIQPKSVKSNLMFEKEAVNFALMTRDYQEFLKTKKLIVDAPDPKELEEQKKALEKEKEAKEQAQK AQKDKREKRKEERAKNRANLENLTNAMSNPQNLSNNKNLSEFIKQQRENELDQMERLEDMQEQAQANALKQIEELNKKQA EETIKQRAKDKINIKTDKPQKSPEDNSIELSPSDSAWRTNLVVRTNKALYQFILRIAQKDNFASAYLTVKLEYPQRHEVS SVIEELKKREEAKRQKELIKQENLNTTAYINRVMMASNEQIINKEKIREEKQKIILDQAKALETQYVHNALKRNPVPRNY NYYQAPEKRSKHIMPSEIFDDGTFTYFGFKNITLQPAIFVVQPDGKLSMTDAAIDPNMTNSGLRWYRVNEIAEKFKLIKD KALVTVINKGYGKNPLTKNYNIKNYGELERVIKKLPEVRDK O25263 Cag pathogenicity island protein (Cag7) Helicobacter pylori (strain ATCC 700392 / 26695) ATCC 700392 / 26695 0.219748641 17 LEVO MNEENDKLETSKKAQQDSPQDLSNEEATEANHFENLLKESKESSDHHLDNPTETQTHFDGDKSEETQTQMDSEGNETSES SNGSLADKLFKKARKLVDNKKPFTQQKNLDEETQELNEEDDQENNEYQEETQTDLIDDETSKKTQQHSPQDLSNEEATEA NHFENLLKESKESSDHHLDNPTETQTNFDGDKSEETQTQMDSEGNETSESSNGSLADKLFKKARKLVDNKKPFTQQKNLD EETQELNEEDDQENNEYQEETQTDLIDDETSKKTQQHSPQDLSNEEATEANHFENLLKESKESSDHHLDNPTETQTNFDG DKSEEITDDSNDQEIIKGSKKKYIIGGIVVAVLIVIILFSRSIFHYFMPLEDKSSRFSKDRNLYVNDEIQIRQEYNRLLK ERNEKGNMIDKNLFFNDDPNRTLYNYLNIAEIEDKNPLRAFYECISNGGNYEECLKLIKDKKLQDQMKKTLEAYNDCIKN AKTEEERIKCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERNECLKLINDPEIREKFRKELELQKELQEYKDCIKN AKTEAEKNKCLKGLSKEAIERLKQQALDCLKNAKTDEERNECLKNIPQDLQKELLADMSVKAYKDCVSKARNEKEKQECE KLLTPEARKKLEQQVLDCLKNAKTDEERKKCLKDLPKDLQSDILAKESLKAYKDCVSQAKTEAEKKECEKLLTPEAKKLL EEEAKESVKAYLDCVSQAKTEAEKKECEKLLTPEAKKKLEEAKKSVKAYLDCVSRARNEKEKKECEKLLTPEAKKLLEQQ ALDCLKNAKTDKERKKCLKDLPKDLQKKVLAKESVKAYLDCVSQAKTEAEKKECEKLLTPEARKLLEEAKKSVKAYLDCV SQAKTEAEKKECEKLLTPEARKLLEE(UNK)AKESVKAYLDCVSQAKNEAEKKECEKLLTLESKKKLEEAKKSVKAYLDC VSQAKTEAEKKECEKLLTPEAKKLLEQQALDCLKNAKTEADKKRCVKDLPKDLQKKVLAKESLKAYKDCVSKARNEKEKK ECEKLLTPEAKKLLEEAKKSVKAYLDCVSQAKTEAEKKECEKLLTPEARKLLEEAKESVKAYKDCVSKARNEKEKKECEK LLTPEAKKLLEQQVLDCLKNAKTEADKKRCVKDLPKDLQKKVLAKESVKAYLDCVSRARNEKEKKECEKLLTPEAKKLLE EAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQEVKKSIKAYLDCVSRARNEKEKKECEKLLTPEARKFLAKQV LNCLEKAGNEEERKACLKNLPKDLQENILAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQEVKKSVKAYLDCV SRARNEKEKKECEKLLTPEARKFLAKELQQKDKAIKDCLKNADPNDRAAIMKCLDGLSDEEKLKYLQEAREKAVADCLAM AKTDEEKRKCQNLYSDLIQEIQNKRTQNKQNQLSKTERLHQASECLDNLDDPTDQEAIEQCLEGLSDSERALILGIKRQA DEVDLIYSDLRNRKTFDNMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDIAKQYETEKTIKDKNLE AKLAKALGGNKKDDDKEKSKKSTAEAKAENNKIDKDVAETAKNISEIALKNKKEKSGEFVDENGNPIDDKKKAEKQDETS PVKQAFIGKSDPTFVLAQYTPIEITLTSKVDATLTGIVSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLM IVFTKAITPDGVIIPLANAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGLGKGRSERTPEF NYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGVYDVKITNKSVVDEIIKQSTKTLSREH EEITTSPKGGN O25262 singleParticle particle 7.0 ETHANE FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 GATAN K2 SUMMIT (4k x 4k) 59.7 1 3.0 FSC 0.143 CUT-OFF 10477 MAXIMUM LIKELIHOOD MAXIMUM LIKELIHOOD emd_22077.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 510 510 510 0 0 0 510 510 510 510.0 510.0 510.0 90.0 90.0 90.0 X Y Z -0.026390014 0.04184106 0.000035585766 0.0011081891 1.0 1.0 1.0 0.01 AUTHOR Helicobacter pylori T4SS dCag3 PR