2024-03-06 REL RCSB RCSB RCSB 2020-04-21 2020-11-11 2020-11-11 2024-03-06 National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) R35GM130290 United States F. tularensis RNAPs70-iglA DNA complex Travis BA Brennan RG RNA polymerase complex, TRANSCRIPTION Travis BA Ramsey KM Prezioso SM Tallo T Wandzilak JM Hsu A Borgnia M Bartesaghi A Dove SL Brennan RG Schumacher MA Structural Basis for Virulence Activation of Francisella tularensis. Mol.Cell US 81 139 2021 33217319 doi:10.1016/j.molcel.2020.10.035 1097-2765 2168 MOCEFL 6wmp FULLOVERLAP Francisella RNAPs70-iglA complex Francisella RNAPs70-iglA complex 0 1 2 3 4 5 6 7 8 Francisella tularensis subsp. holarctica LVS DNA-directed RNA polymerase subunit alpha 1 Francisella tularensis subsp. holarctica (strain LVS) LVS 0.035393387 1 LEVO MSNNNSKLEFVPNIQLKEDLGAFSYKVQLSPVEKGMAHILGNSIRRVLLSSLSGASIIKVNIANVLHEYSTLEDVKEDVV EIVSNLKKVAIKLDTGIDRLDLELSVNKSGVVSAGDFKTTQGVEIINKDQPIATLTNQRAFSLTATVSVGRNVGILSAIP TELERVGDIAVDADFNPIKRVAFEVFDNGDSETLEVFVKTNGTIEPLAAVTKALEYFCEQISVFVSLRVPSNGKTGDVLI DSNIDPILLKPIDDLELTVRSSNCLRAENIKYLGDLVQYSESQLMKIPNLGKKSLNEIKQILIDNNLSLGVQIDNFRELV EGK Q2A5E5 2.7.7.6 DNA-directed RNA polymerase subunit alpha 2 Francisella tularensis subsp. holarctica (strain LVS) LVS 0.035113031 1 LEVO MALENLLHPTNIKIDEYAKNATKFSFEALERGVGYTLGFALKQTMLYSIAGACVTSIKINDGKVTSLEDVIPCDETVADI ILNVKSLSVTLAEDVETGTITFELSGSEEEIFSEEAKLSEGLAITEEVFICSYNGGKKLKIEAKVEKGVGFRPAQDNFKD GEFLLDATFSPVVFCDFEIKDARVGRRTDLDKLELNIKTNGNVNCEEALRLAATKIQNQLRNIVDIEEINKGIFVEDPKD INPILLKHVEELNLTARSSNCLKAVNIRLIGELVQKTENELLKAPNFGKKSLTEIKDKLSELGLSLGTLIENWPQDL Q2A4H7 2.7.7.6 DNA-directed RNA polymerase subunit beta Francisella tularensis subsp. holarctica (strain LVS) LVS 0.15153614099999999 1 LEVO MSYSYAEKKRIRKEFGVLPHILDVPYLLSIQTESYKKFLTVDAAKGRLHSGLEIVLKQSFPVESKNGQYELHYVDYQIGE PTFDETECQVRGATYDAPLNVKLRLVVYNKDALPNEKIVEDIREEYVYMGDIPLMTTNGTFIINGTERVVVSQLHRSPGA FFSKDDSEEGAFSARIIPYRGSWLDFEFDSKGIIWARIDRKRKFCATVILKALGYTQEQILENFSESKTITFNSKGFALR LDNLSNMKGELLKFDIVDAQDNVIVKKNKKLTSRDVKKIKDAGVDSVAIDFDLVSTLRVAKDIVNEATGEVIAYANDDVT ESLLKSCVEVGMLELEVIDFITTERGRYISDTLKYDLTRNTDEALVEIYKVLRPGDPPAAASVKALFEGLFFIESRYSLS DIGRMKLNARLGSDKVSKDIYTLENSDIVGVIEELINIRDGKGKVDDIDHLGNRRVRSVGEMVENQFRIGLYRVEKGIRE SMSLVHKDKLMPKDIVNSKPITAAIKEFFTSGALSQFMDQDNPLSEVTHKRRISALGPGGLSRDRAGFEVRDVHATHYGR LCPIETPEGPNIGLINSLASYARVNDYGFLEAPYRKVVDGKVTDEIEYLSAIDEDNYVIAQASTKLDENNHFVEDIIQCR SGGEAIFTESSRVQYMDVSAKQMVSAAAALIPFLEHDDANRVLMGANMQRQAVPTLKSEKPLVGTGMEKIVARDSGNCII ARNVGEVAEVDSNRIVIKVDTEKSQTSNLVDIYSLTKFKRSNKNTCINQRPIVNVGDKVEAGDILADGFATDFGELSLGH NLMVAFMPWNGYNFEDSILLSERIVKDDKYTSIHIEEFTCVARDTKLGPEEITADIPNVSESSLAKLDESGIVHIGANVE AGDILVAKITPKAEQQLTPEERLLRAIFNEKASNVVDSSLRMPSGTSGTVINVQVFENDKGGKSKRALKIEKELIDKARK DFDEEFAVIESVVKSSIEQEVVGAKIQKAKGLKKGAILTKEFLATLPLSKWLEISFEDEKLEEKVQNAREYYEEAKIAID AKFEAKKKSITQSNELSPGVLKTVKVFVAIKKRIQPGDKMAGRHGNKGVVSRVLPVEDMPYMEDGTPVDVCLNPLGIPSR MNIGQILEAHLGLASYGLGKKIEKTLEKTRKAAELRKTLEEVYNSVGDKKVNLEALNDEEILTLCDNLKGGVPIATPVFD GAKEEDIKSLLKIGGFATNGQMKLFDGRTGKPFDRHVTVGYMYMLKLDHLVDDKMHARSTGSYSLVTQQPLGGKAQFGGQ RFGEMEVWALQAYGAAYTLREMLTVKSDDIAGRSKMYKNIVDGKLTMNVDVPESFNVLRNEVRALGIDMDFDYSSEEE Q2A1M7 2.7.7.6 DNA-directed RNA polymerase subunit beta' Francisella tularensis subsp. holarctica (strain LVS) LVS 0.17844549999999998 1 LEVO MNNGILHQNYNSKKFDIIKISLASPEVIRSWSHGEVKKPETINYRTFKPERDGLFCAKIFGPIKDYECLCGKYKRLKHRG VVCERCGVEVEQAKVRRERMGHIDLVCPVVHIWYLKSLPSRIGLFLDMPLKNVEKVLYFESYIVTDPGMTPLEKKQLLTD EEYAEALENYGYEFEASMGAEAIRDLLADTDIESEIELLQAECEESKSTAKKEKAIKRLRLLETFQASGNKPEWMVMTVL PVLPPDLRPLVPIEGGRFATSDLNDLYRRVINRNNRLKKLLDLNAPDIIVRNEKRMLQEAVDALLDNGRRGRAVTGSNKR PLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPSLRLHECGLPKKMALELFKPFVYSKLRLGGHATTIKQAKRMVE LEEAVVWDILETVINEHPVLLNRAPTLHRLGIQAFEPRLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLTVESQLEARV LMMSTNNILSPASGQPIITPTQDIVLGLYYITREKEGARGEGKLFSSYEDVSRAYNSGTIDIHAKIKLRIDRQVFDTKGN TYNEKGVVNTTVGRALLLNILPEGLSFSLLNKVLVKKEISKIINQAFRVLGGKATVVLADKLMYAGFKYSTLSGVSVGVD DMTIPDNKEAKIEEAEKEIKQITEQYQSSLITENERYNNIINIWSKTSDEVGASMMDAISKDTVSINGEKKEIESFNSVY MMAKSGARGSYNQMRQLAGMRGLMAKPDGTMIETAITANFREGLSVLQYFTSTHGARKGLADTALKTANAGYLTRRLVDV AQDLVVIEEDCGTDDGLMFSAIVEDGEVKVPLVERALGRTLAADVVTEKGVVLLEAGTLLDENLVELLDDNGIDMIKVRS PITCKTRRGLCAKCYGRDLARERQVNVGESVGVIAAQSIGEPGTQLTMRTFHTGGAASLGITVSDIKVKTAGKIKFKNIR TVTNKEGQEIVISRAGEIIVSDTMGRVREQHKIPMGAVVPLASGKAVEIGDVIATWDPHAQPLITDVAGKVVLEDVIDGI TSKHTYDDLTGQQTIEITSISQRTTSKNLKPVVKIVDEKGAELKSIPLAVGAVLNVADDSILEVGDIVAKIPLEGSKNKD ITGGLPRVAELFEARRPKDAAILSPCDGMVRLGNRDTKEKQRIEIIDKNGHIVEEILLPKSRHLVVFDGEQVSRGDVLAD GPTDPHDLLKYKGLEEFADYILIEAQSVYRMQGVVINDKHIETIVRQMLRKAVILDEGDSKFVKDESIELVRILEENDKL RKQGKKEVEYELVLMGITRSSLSTESFLSAASFQETTRVLTEASINSQIDNLRGLKENVLIGRLIPAGTGLAVRKESAKI EKMREELGVEDNMVFTDLSSFNPEEISFDSIQSQKEDKDINEDIEESLRNALESLDFAAASMEKRRWKKNFIAVSAANRF KKISSSGALDYDIPTTASENLYFQGELKTAALAQHDEAVDNKFNKEQQNAFYEILHLPNLNEEQRNAFIQSLKDDPSQSA NLLAEAKKLNDAQAPKVDNKFNKEQQNAFYEILHLPNLNEEQRNAFIQSLKDDPSQSANLLAEAKKLNGAQAPKVDANSA GKST 2.7.7.6 DNA-directed RNA polymerase subunit omega Francisella tularensis subsp. holarctica (strain LVS) LVS 0.008184332999999998 1 LEVO MARVTVEDCLDKVETRFDLVVLASMRANKILKNGYSESMENEKKEKATVVALREIAESEITSEQILRNEIEG Q2A273 2.7.7.6 DNA NT-strand Francisella tularensis subsp. holarctica LVS 0.003945588999999999 1 (DA)(DC)(DG)(DG)(DC)(DG)(DA)(DA)(DT)(DA)(DC)(DC)(DC) DNA DNA T-strand Francisella tularensis subsp. holarctica LVS 0.007303687 1 (DG)(DG)(DG)(DT)(DA)(DT)(DT)(DC)(DG)(DC)(DC)(DG)(DT)(DG)(DT)(DA)(DC)(DC)(DT)(DC) (DT)(DC)(DC)(DT) DNA RNA Francisella tularensis subsp. holarctica LVS 0.0033040599999999997 1 AGGAGAGGUA MAGNESIUM ION 2.4305e-05 1 MG ZINC ION 6.5409e-05 2 ZN singleParticle particle 0.4 8.0 ETHANE FEI TITAN KRIOS OTHER BRIGHT FIELD FIELD EMISSION GUN 300 2.7 GATAN K3 (6k x 4k) COUNTING 60.0 1
RNAPs70-(MglA-SspA)-iglA map low-pass filtered to 60 angstroms.
 C1 2.98 FSC 0.143 CUT-OFF RELION 3.0 137682 MAXIMUM LIKELIHOOD RELION 3.0 MAXIMUM LIKELIHOOD emd_21850.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 352 352 352 0 0 0 352 352 352 376.64 376.64 376.64 90.0 90.0 90.0 X Y Z -0.1106589 0.19803844 0.000011170372 0.0048588035 1.07 1.07 1.07 0.025 AUTHOR F. tularensis RNAPs70-iglA sharpened map REAL emd_21850_additional_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 352 352 352 0 0 0 352 352 352 376.64 376.64 376.64 90.0 90.0 90.0 X Y Z -0.043116294 0.093898706 0.000011165603 0.0021033692 1.07 1.07 1.07 AUTHOR F. tularensis RNAPs70-iglA unsharpened map