REL PDBe PDBe PDBe 2012-05-23 2012-10-03 2012-10-10 2012-10-17 Single particle electron microscopy of PilQ dodecameric complexes from Neisseria meningitidis. Berry JL Phelan MM Collins RF Adomavicius T Tonjum T Frye S Bird L Owens R Ford RC Lian LY Derrick JP Outer membrane protein, PilQ, pilus biogenesis Berry JL Phelan MM Collins RF Adomavicius T Tonjum T Frye S Bird L Owens R Ford RC Lian LY Derrick JP Structure and assembly of a trans-periplasmic channel for type IV pili in Neisseria meningitidis. PLOS PATHOG. 8 e1002923 e1002923 2012 23028322 doi:10.1371/journal.ppat.1002923 4av2 FULLOVERLAP Outer membrane protein PilQ from Neisseria meningitidis Outer membrane protein PilQ from Neisseria meningitidis
Isolated from Neisserial membranes.
Dodecamer 1 0.96 0.96 From sequence PilQ Neisseria meningitidis MC58 Outer membrane 0.96 0.96 1 Dodecamer false GO:0006810 GO:0009306 GO:0015031 GO:0030420 GO:0009279 GO:0016020 IPR021731 IPR001775 IPR005644 IPR013355 IPR011662 IPR004846 IPR004845 singleParticle particle 1.0 7.5
10 mM Tris-HCl, pH 7.5, 150 mM NaCl, 5 mM EDTA, and 0.1% (w/v) Zwittergent 3-10
 NEGATIVE
Unstained: Both sides of the grid were briefly blotted dry with Whatman No. 1 filter paper (2 x 1s blots) using a Vitrobot (FEI) device (90% relative humidity), and the grid was then immediately plunged into liquid ethane maintained at <100K.
400 mesh Quantifoil holey carbon grid with 1.2 micron diameter holes.
 ETHANE 90 100 FEI VITROBOT MARK III Both sides of the grid were briefly blotted dry with Whatman No. 1 filter paper in a humidity-controlled chamber using a Vitrobot (FEI) device (90% relative humidity), and the grid was then plunged into liquid ethane maintained at <100K. FEI TECNAI F20 FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 200 2.0 1.2 5.1 33000.0 33112.0 GATAN LIQUID NITROGEN 94 100 97 Via FFT 2007-11-27 GENERIC GATAN (4k x 4k) 55 4 8. Liquid nitrogen cooled
29000
CTFFIT each micrograph
 C12 OTHER 26.0 OTHER EMAN
Two different starting models were employed with convergence between them. This map was generated from model 1.
25303 101 emd_2105.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 64 64 64 -32 -32 -32 64 64 64 289.92 289.92 289.92 90.0 90.0 90.0 Y X Z -0.11259504 0.34620619 0.09523162 0.06463852 4.53 4.53 4.53 0.28 EMDB Reconstruction of outer membrane protein complex PilQ.
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