2021-03-03 REL RCSB RCSB RCSB 2019-09-29 2020-01-29 2020-10-14 2021-03-03 Royal Society BB/M022765/1 United Kingdom Biotechnology and Biological Sciences Research Council BB/M017982/1 United Kingdom Structural basis for control of antibiotic production by bacterial hormones Bhukya H Zhou S Bhukya H Malet N Harrison PJ Rea D Belousoff MJ Venugopal H Sydor PK Styles KM Song L Cryle MJ Alkhalaf LM Fulop V Challis GL Corre C Molecular basis for control of antibiotic production by a bacterial hormone. Nature UK 590 463 467 2021 33536618 doi:10.1038/s41586-021-03195-x 1476-4687 0006 NATUAS EMD-20781 associated EM volume protein-DNA complex protein-DNA complex 0 1 2
protein-DNA complex. two homodimers of protein bound to a double stranded DNA
Streptomyces coelicolor A3(2) Escherichia coli BL21(DE3) 0.114 protein MmfR Streptomyces coelicolor A3(2) A3(2) Escherichia coli BL21(DE3) LEVO MHHHHHHGKPIPNPLLGLDSTENLYFQGIDPFTMTSAQQPTPFAVRSNVPRGPHPQQERSIKTRAQILEAASEIFASRGYRGASVKDVAERVGMTKGAVYFHFPSKESLAIAVVEEHYARWPAAMEEIRIQGFTPLETVEEMLHRAAQAFRDDPVMQAGARLQSERAFIDAELPLPYVDWTHLLEVPLQDAREAGQLRAGVDPAAAARSLVAAFFGMQHVSDNLHQRADIMERWQELRELMFFALRA synthetic DNA Streptomyces coelicolor A3(2)
5'-ATACCTGCGGGAAGGTATT-3'
ATACCTGCGGGAAGGTATT DNA singleParticle particle 0.08 8.0 20.0 C4H11NO3 Tris 200.0 NaCl NaCl
20 mM tris pH 8.0 and 200 mM NaCl fresh and autoclaved
 Quantifoil R1.2/1.3 COPPER ETHANE 100 277 FEI VITROBOT MARK III
protein-DNA complex
 FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 50.0 2.7 -0.0005 165000.0 FEI TITAN KRIOS AUTOGRID HOLDER VOLTA PHASE PLATE 20 GATAN K2 SUMMIT (4k x 4k) COUNTING 1-50 2 10.0 50.0 1 4PXI C1 4.2 FSC 0.143 CUT-OFF RELION 3.0-beta 379033 MAXIMUM LIKELIHOOD RELION 3.0 MAXIMUM LIKELIHOOD RELION 3.0-beta emd_20781.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 180 180 180 0 0 0 180 180 180 196.56 196.56 196.56 90.0 90.0 90.0 X Y Z -0.045197695 0.109287724 0.00030176292 0.0032651832 1.092 1.092 1.092 0.0181 AUTHOR Map file - Postprocess masked .mrc UCSF Chimera 1.11, visualization -Volume viewer step 1 -Contour level 0.0181 FLEXIBLE FIT 214.0 emd_20781_msk_1.map emd_20781_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 180 180 180 0 0 0 180 180 180 196.56 196.56 196.56 90.0 90.0 90.0 X Y Z -0.020377945 0.06923165 -6.351746e-05 0.0028280953 1.092 1.092 1.092 AUTHOR Half map file - run_half1_class001_unfil.mrc UCSF Chimera 1.11, visualization -Volume viewer step 1 -Contour level 0.017 emd_20781_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 180 180 180 0 0 0 180 180 180 196.56 196.56 196.56 90.0 90.0 90.0 X Y Z -0.01907913 0.071303256 -6.4512344e-05 0.0028395434 1.092 1.092 1.092 AUTHOR Half map file - run_half2_class001_unfil.mrc UCSF Chimera 1.11, visualization -Volume viewer step 1 -Contour level 0.017